Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668760
Identifier: 15668760
GI number: 15668760
Start: 515071
End: 515427
Strand: Reverse
Name: 15668760
Synonym: MJ0580
Alternate gene names: NA
Gene position: 515427-515071 (Counterclockwise)
Preceding gene: 15668767
Following gene: 15668759
Centisome position: 30.96
GC content: 31.65
Gene sequence:
>357_bases ATGACGAAAATTTTAAAGGTGAAATTAATGAAAATAGCTCTACCTATAGATAACAATCGGCTATCTCCACACTTTGGAAG GTGTGAAAAATTCATGATTGTAGAGATTGAAAATGGAGAGATAAAAAATAAAGAGATCATTGAAAACACTGCAAGAAATG GCATGCATGGAGTTGGAACTACATCAGCCTCATTAATTGCAAATATGGGTGTAAATGCCATAATAGTCCAAAATATAGGA CCTAAGGCATACAGTGTTTTTAAACAGCTTGGCATTGATGTTTATAAAGCTAATACAACATCTATTGATGAATGCATAAA GCTATTTTTAGAAGGAAAATTAGAAAAATTTGAGTGA
Upstream 100 bases:
>100_bases AATTGATATATTTTAATATTTTTAAAAAGAATTCAAATATTTGGATAATATTTCAGTAAATTTTATATATTTTCTCGCAT AAGCGTTGTAATATTGAAGA
Downstream 100 bases:
>100_bases GATGATGATTGTTGCAGTAACTGGTGGTAAAGGAGGGACTGGAAAATCTACCTTGTCAGCAAACCTCTTTTTTTATTTTA TTGAGAATTATAAAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTKILKVKLMKIALPIDNNRLSPHFGRCEKFMIVEIENGEIKNKEIIENTARNGMHGVGTTSASLIANMGVNAIIVQNIG PKAYSVFKQLGIDVYKANTTSIDECIKLFLEGKLEKFE
Sequences:
>Translated_118_residues MTKILKVKLMKIALPIDNNRLSPHFGRCEKFMIVEIENGEIKNKEIIENTARNGMHGVGTTSASLIANMGVNAIIVQNIG PKAYSVFKQLGIDVYKANTTSIDECIKLFLEGKLEKFE >Mature_117_residues TKILKVKLMKIALPIDNNRLSPHFGRCEKFMIVEIENGEIKNKEIIENTARNGMHGVGTTSASLIANMGVNAIIVQNIGP KAYSVFKQLGIDVYKANTTSIDECIKLFLEGKLEKFE
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y580_METJA (Q58000)
Other databases:
- EMBL: L77117 - PIR: D64372 - RefSeq: NP_247559.1 - ProteinModelPortal: Q58000 - SMR: Q58000 - GeneID: 1451445 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0580 - NMPDR: fig|243232.1.peg.596 - TIGR: MJ0580 - HOGENOM: HBG733757 - OMA: MIVEIEN - ProtClustDB: CLSK2517628 - BioCyc: MJAN243232:MJ_0580-MONOMER - InterPro: IPR003731 - Gene3D: G3DSA:3.30.420.130
Pfam domain/function: PF02579 Nitro_FeMo-Co; SSF53146 FeMo-co_biosynth
EC number: NA
Molecular weight: Translated: 13140; Mature: 13008
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILKVKLMKIALPIDNNRLSPHFGRCEKFMIVEIENGEIKNKEIIENTARNGMHGVGT CCCHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC TSASLIANMGVNAIIVQNIGPKAYSVFKQLGIDVYKANTTSIDECIKLFLEGKLEKFE CHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKILKVKLMKIALPIDNNRLSPHFGRCEKFMIVEIENGEIKNKEIIENTARNGMHGVGT CCHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC TSASLIANMGVNAIIVQNIGPKAYSVFKQLGIDVYKANTTSIDECIKLFLEGKLEKFE CHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087