Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668736
Identifier: 15668736
GI number: 15668736
Start: 491871
End: 492428
Strand: Reverse
Name: 15668736
Synonym: MJ0556
Alternate gene names: NA
Gene position: 492428-491871 (Counterclockwise)
Preceding gene: 15668737
Following gene: 15668734
Centisome position: 29.58
GC content: 28.85
Gene sequence:
>558_bases TTGGTAGATTTCTATGAAATAAGGGGAGATATTATGTCAAAATTCGTGAAACTACACTTAGTAAGAACCCTTAATAAATA TAAAGAGCTACAAAAAATTAGGGTAAAAGATGTAATGATATCTGGTGACGTAATCATAACAACTCCTGAAAAAACGATAA AGGAAATATTTGATGAAATGATTAAACACAACATTAGCGGAATGCCTGTAGTTGATGATAGGGGGGTAATGATTGGATTT ATTACACTAAGAGAAATTAGAAAGTATATGACAAGTCATCCATATCTTAATGTGGGGGAGGTTATGCTAAAAAATCCTCC TTATACTACTGCTGATGAAGATATAATTACAGCCTTTGAAAAAATGATAGAATCCAATAAGAAATTAGACCAATTGCCAG TAATCAATACAAAATATCCTGAAAAAATTCTTGGTAAATTGGAAGGCATTATTTTTATGGAGGATATTATAAAATTGCTC TATGAAAATATTATAAAAGAGTTAAAAACTCTTGTAAGTTTCTACAATCACAATACTGAGATTAAGATAAAATATTAA
Upstream 100 bases:
>100_bases ATTTAAAGTGAATTAATAGTAACAATAATTTATTTAAACCATGACAACAAAATTCTTAATTATGGAGTGCTTTACATTTT AATAGCTCAATACTGCGATT
Downstream 100 bases:
>100_bases AGCTAAAAAAAGAACTTAGAATAATTAAAAATACTTTTAGAAGAAATTATTGACCTCTTTTATGCAATTATAAACCAATT CCACAGTTTTTTCTAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MVDFYEIRGDIMSKFVKLHLVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIGF ITLREIRKYMTSHPYLNVGEVMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLL YENIIKELKTLVSFYNHNTEIKIKY
Sequences:
>Translated_185_residues MVDFYEIRGDIMSKFVKLHLVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIGF ITLREIRKYMTSHPYLNVGEVMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLL YENIIKELKTLVSFYNHNTEIKIKY >Mature_185_residues MVDFYEIRGDIMSKFVKLHLVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIGF ITLREIRKYMTSHPYLNVGEVMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLL YENIIKELKTLVSFYNHNTEIKIKY
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 21692; Mature: 21692
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFYEIRGDIMSKFVKLHLVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHH IKHNISGMPVVDDRGVMIGFITLREIRKYMTSHPYLNVGEVMLKNPPYTTADEDIITAFE HHCCCCCCCEECCCCCEEHHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCHHHHHHHH KMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLLYENIIKELKTLVSFYNHNTE HHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IKIKY EEEEC >Mature Secondary Structure MVDFYEIRGDIMSKFVKLHLVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHH IKHNISGMPVVDDRGVMIGFITLREIRKYMTSHPYLNVGEVMLKNPPYTTADEDIITAFE HHCCCCCCCEECCCCCEEHHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCHHHHHHHH KMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLLYENIIKELKTLVSFYNHNTE HHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IKIKY EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]