Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668718

Identifier: 15668718

GI number: 15668718

Start: 474022

End: 474804

Strand: Reverse

Name: 15668718

Synonym: MJ0538

Alternate gene names: NA

Gene position: 474804-474022 (Counterclockwise)

Preceding gene: 15668719

Following gene: 15668717

Centisome position: 28.52

GC content: 28.61

Gene sequence:

>783_bases
ATGATAAAAATACACGCATTAGAGGAAGTTAAAGGAAATTCTAAAGAAATTGTTGAAAAAGAATTTGAAAATTTGGCTAA
TGAGCTGAAAGAAAAATATAATGCTAAACTTAAATATGTAGATGAAGACATAGAAGAAGACGAAAATTTAAAGTTTTATA
CAAAAATTGGAGAATTTGAGATAAATTTTGATAACTTTAAGGATTATATAAACTTCTGTTTAAAATATGGGGCAGATATT
GAAGTTATAAAACCAGAGAAATTAAAACTCACAGCTAATGAGATAAATGAAGTTTTAGCTTTGGTTATAAGTGCGTTTAA
ATCATTTATGGATACATATAAGATTGGATTTGATGTATATGTTAAAGAGAAAAAAGATATAGATGTTGAGGGATATAAAA
AAGGCAAGTATGATGAAGATGAAATAGCCGATTTTGAAGAAGAAGGGTTTATAAGAGTTAAGGCAGTGTTTGAAGCTATT
GGAAAAAATGAAAATGAAGTGGTAAAAAACCTGCTTATTTCTTTGGATAGGGATGAGATTATAATCAACAAGATTATAAC
TAAAAACTTCAATGAAAATAATGAGAATTTTAATGGACTAATGGCTGTTGATTTGTTATGTAATCCCTTTGAGATGTTTG
AAATCGCCTATAAGTATTTACCAGTTGCTATATCCATCCAAAGAGATGAGATTGAATTAAGTTTAGCTGATATTCAAGAT
ATTGGTAACGAGCTATCTGGAGCTATGTTCGAACTTAGCCATGCCGTAATTATGAGGAAATAG

Upstream 100 bases:

>100_bases
CGGGCCAAAGTTAGGAGCTTTCTTAGCAACTCTTGGAAAAGATTTTGTTATAAGAAGATATTCATTATTTGAATAATTTT
TTACTTTTTTTGGTGGTAAG

Downstream 100 bases:

>100_bases
CTATGCTAAGAGGCATTACCGAGCGTAGCGAGGTAATGCATCTGTTTTGATCAACGCACCATAGCTTCGCCCTATTGGGA
TACCTATTTAACTAAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI
EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI
GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD
IGNELSGAMFELSHAVIMRK

Sequences:

>Translated_260_residues
MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI
EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI
GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD
IGNELSGAMFELSHAVIMRK
>Mature_260_residues
MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI
EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI
GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD
IGNELSGAMFELSHAVIMRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y538_METJA (Q57958)

Other databases:

- EMBL:   L77117
- PIR:   B64367
- RefSeq:   NP_247517.1
- ProteinModelPortal:   Q57958
- GeneID:   1451403
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0538
- NMPDR:   fig|243232.1.peg.554
- TIGR:   MJ0538
- HOGENOM:   HBG541074
- OMA:   QDIGNDL
- ProtClustDB:   CLSK876235
- BioCyc:   MJAN243232:MJ_0538-MONOMER
- InterPro:   IPR020292
- ProDom:   PD039347

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30185; Mature: 30185

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFE
CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCEE
INFDNFKDYINFCLKYGADIEVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVY
ECHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAIGKNENEVVKNLLISLDRDEI
EECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
IINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD
HHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCEEEEEECCHHEEHHHHHHH
IGNELSGAMFELSHAVIMRK
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFE
CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCEE
INFDNFKDYINFCLKYGADIEVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVY
ECHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAIGKNENEVVKNLLISLDRDEI
EECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
IINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD
HHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCEEEEEECCHHEEHHHHHHH
IGNELSGAMFELSHAVIMRK
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087