Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668718
Identifier: 15668718
GI number: 15668718
Start: 474022
End: 474804
Strand: Reverse
Name: 15668718
Synonym: MJ0538
Alternate gene names: NA
Gene position: 474804-474022 (Counterclockwise)
Preceding gene: 15668719
Following gene: 15668717
Centisome position: 28.52
GC content: 28.61
Gene sequence:
>783_bases ATGATAAAAATACACGCATTAGAGGAAGTTAAAGGAAATTCTAAAGAAATTGTTGAAAAAGAATTTGAAAATTTGGCTAA TGAGCTGAAAGAAAAATATAATGCTAAACTTAAATATGTAGATGAAGACATAGAAGAAGACGAAAATTTAAAGTTTTATA CAAAAATTGGAGAATTTGAGATAAATTTTGATAACTTTAAGGATTATATAAACTTCTGTTTAAAATATGGGGCAGATATT GAAGTTATAAAACCAGAGAAATTAAAACTCACAGCTAATGAGATAAATGAAGTTTTAGCTTTGGTTATAAGTGCGTTTAA ATCATTTATGGATACATATAAGATTGGATTTGATGTATATGTTAAAGAGAAAAAAGATATAGATGTTGAGGGATATAAAA AAGGCAAGTATGATGAAGATGAAATAGCCGATTTTGAAGAAGAAGGGTTTATAAGAGTTAAGGCAGTGTTTGAAGCTATT GGAAAAAATGAAAATGAAGTGGTAAAAAACCTGCTTATTTCTTTGGATAGGGATGAGATTATAATCAACAAGATTATAAC TAAAAACTTCAATGAAAATAATGAGAATTTTAATGGACTAATGGCTGTTGATTTGTTATGTAATCCCTTTGAGATGTTTG AAATCGCCTATAAGTATTTACCAGTTGCTATATCCATCCAAAGAGATGAGATTGAATTAAGTTTAGCTGATATTCAAGAT ATTGGTAACGAGCTATCTGGAGCTATGTTCGAACTTAGCCATGCCGTAATTATGAGGAAATAG
Upstream 100 bases:
>100_bases CGGGCCAAAGTTAGGAGCTTTCTTAGCAACTCTTGGAAAAGATTTTGTTATAAGAAGATATTCATTATTTGAATAATTTT TTACTTTTTTTGGTGGTAAG
Downstream 100 bases:
>100_bases CTATGCTAAGAGGCATTACCGAGCGTAGCGAGGTAATGCATCTGTTTTGATCAACGCACCATAGCTTCGCCCTATTGGGA TACCTATTTAACTAAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD IGNELSGAMFELSHAVIMRK
Sequences:
>Translated_260_residues MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD IGNELSGAMFELSHAVIMRK >Mature_260_residues MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFEINFDNFKDYINFCLKYGADI EVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVYVKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAI GKNENEVVKNLLISLDRDEIIINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD IGNELSGAMFELSHAVIMRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y538_METJA (Q57958)
Other databases:
- EMBL: L77117 - PIR: B64367 - RefSeq: NP_247517.1 - ProteinModelPortal: Q57958 - GeneID: 1451403 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0538 - NMPDR: fig|243232.1.peg.554 - TIGR: MJ0538 - HOGENOM: HBG541074 - OMA: QDIGNDL - ProtClustDB: CLSK876235 - BioCyc: MJAN243232:MJ_0538-MONOMER - InterPro: IPR020292 - ProDom: PD039347
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30185; Mature: 30185
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFE CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCEE INFDNFKDYINFCLKYGADIEVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVY ECHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAIGKNENEVVKNLLISLDRDEI EECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHH IINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD HHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCEEEEEECCHHEEHHHHHHH IGNELSGAMFELSHAVIMRK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKIHALEEVKGNSKEIVEKEFENLANELKEKYNAKLKYVDEDIEEDENLKFYTKIGEFE CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCEE INFDNFKDYINFCLKYGADIEVIKPEKLKLTANEINEVLALVISAFKSFMDTYKIGFDVY ECHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VKEKKDIDVEGYKKGKYDEDEIADFEEEGFIRVKAVFEAIGKNENEVVKNLLISLDRDEI EECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHH IINKIITKNFNENNENFNGLMAVDLLCNPFEMFEIAYKYLPVAISIQRDEIELSLADIQD HHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCEEEEEECCHHEEHHHHHHH IGNELSGAMFELSHAVIMRK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087