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The map label for this gene is 15668709

Identifier: 15668709

GI number: 15668709

Start: 465516

End: 466214

Strand: Reverse

Name: 15668709

Synonym: MJ0529

Alternate gene names: NA

Gene position: 466214-465516 (Counterclockwise)

Preceding gene: 15668712

Following gene: 15668708

Centisome position: 28.0

GC content: 29.18

Gene sequence:

>699_bases
ATGGCGGAATATGTTTTCCTAATTTATTTGGTAGATATCAAATATCAATTTCGTGAGAACATGTATAAAAAATTAGAGAT
TATTGAAAGGGCAATACTATTAAATCCTCAATATATCCAGGCTTTTAGAGAAAAATTAAAAATTACCCAATCAAAATTAG
CTAAAGAAAGTGGAATTAGTCAATCTCATCTCAGCATGTTAGAGAAAGGAAAAAGACCAGCAACTAAACTTATAGCAACT
GCTGTAACTCTTGGTTTATTAAAATGTTTCTCCTCAAACAATGTTGAAAATCCAATAATTGAACTTTTAGATGCACTCTC
CCTTTTAAAGTTTGAAGATACTTTTGCAGAATTTGTATCTGAAATTATTGAAAAAGGTGATAAGGGGTATCTTAGGTTAA
TTGAAAACTACCCTGTATTAATAATAAGTAAGGAGAACTTATTAAATGAGATGAGAAGTAGGTTAGAAGTTATGGATATT
GAGAGGATAGAACTATCAAGAGGGAGAATAAAAGTCATAGGAAAACATCTTGACAATAAATATGTTGAGATATTCTTAGA
TTGCTCAGATATTAGGAGATTAGAAAAAAAATTCATGAAAAAAACTGGGAAGAAGGTTATCATCCAAGTATTTCCAAAAG
ATGAAGTTCCACCAATTTATTCAATAAATAAAGATTGTGTTATAATTCATTGCTGGTAA

Upstream 100 bases:

>100_bases
ATATATAAACTTTTCGTCTTATTTTTTGTGGGTAACTTTTATATATTTCCCAGAGGATAATGTTATTCCATGGCGATAAT
ATAATGATTGATTATGAAAA

Downstream 100 bases:

>100_bases
ATCAGGGAAATAAAAGAAAGTGGGGCTGAACGTAGTGAAGCCCCGCTCTGGGTATCCCAATAGGGCGAAGCCCTATGGTG
TATAATAATTCATTGCTGGT

Product: repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MAEYVFLIYLVDIKYQFRENMYKKLEIIERAILLNPQYIQAFREKLKITQSKLAKESGISQSHLSMLEKGKRPATKLIAT
AVTLGLLKCFSSNNVENPIIELLDALSLLKFEDTFAEFVSEIIEKGDKGYLRLIENYPVLIISKENLLNEMRSRLEVMDI
ERIELSRGRIKVIGKHLDNKYVEIFLDCSDIRRLEKKFMKKTGKKVIIQVFPKDEVPPIYSINKDCVIIHCW

Sequences:

>Translated_232_residues
MAEYVFLIYLVDIKYQFRENMYKKLEIIERAILLNPQYIQAFREKLKITQSKLAKESGISQSHLSMLEKGKRPATKLIAT
AVTLGLLKCFSSNNVENPIIELLDALSLLKFEDTFAEFVSEIIEKGDKGYLRLIENYPVLIISKENLLNEMRSRLEVMDI
ERIELSRGRIKVIGKHLDNKYVEIFLDCSDIRRLEKKFMKKTGKKVIIQVFPKDEVPPIYSINKDCVIIHCW
>Mature_231_residues
AEYVFLIYLVDIKYQFRENMYKKLEIIERAILLNPQYIQAFREKLKITQSKLAKESGISQSHLSMLEKGKRPATKLIATA
VTLGLLKCFSSNNVENPIIELLDALSLLKFEDTFAEFVSEIIEKGDKGYLRLIENYPVLIISKENLLNEMRSRLEVMDIE
RIELSRGRIKVIGKHLDNKYVEIFLDCSDIRRLEKKFMKKTGKKVIIQVFPKDEVPPIYSINKDCVIIHCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y529_METJA (Q57949)

Other databases:

- EMBL:   L77117
- PIR:   A64366
- RefSeq:   NP_247508.1
- ProteinModelPortal:   Q57949
- GeneID:   1451394
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0529
- NMPDR:   fig|243232.1.peg.545
- TIGR:   MJ0529
- HOGENOM:   HBG541106
- OMA:   SHLSMLE
- ProtClustDB:   CLSK876231
- BioCyc:   MJAN243232:MJ_0529-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 27091; Mature: 26960

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYVFLIYLVDIKYQFRENMYKKLEIIERAILLNPQYIQAFREKLKITQSKLAKESGIS
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
QSHLSMLEKGKRPATKLIATAVTLGLLKCFSSNNVENPIIELLDALSLLKFEDTFAEFVS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIIEKGDKGYLRLIENYPVLIISKENLLNEMRSRLEVMDIERIELSRGRIKVIGKHLDNK
HHHHCCCCHHEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCC
YVEIFLDCSDIRRLEKKFMKKTGKKVIIQVFPKDEVPPIYSINKDCVIIHCW
EEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCEEEEEEC
>Mature Secondary Structure 
AEYVFLIYLVDIKYQFRENMYKKLEIIERAILLNPQYIQAFREKLKITQSKLAKESGIS
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
QSHLSMLEKGKRPATKLIATAVTLGLLKCFSSNNVENPIIELLDALSLLKFEDTFAEFVS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIIEKGDKGYLRLIENYPVLIISKENLLNEMRSRLEVMDIERIELSRGRIKVIGKHLDNK
HHHHCCCCHHEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCC
YVEIFLDCSDIRRLEKKFMKKTGKKVIIQVFPKDEVPPIYSINKDCVIIHCW
EEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087