Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668701
Identifier: 15668701
GI number: 15668701
Start: 461765
End: 462421
Strand: Reverse
Name: 15668701
Synonym: MJ0522
Alternate gene names: NA
Gene position: 462421-461765 (Counterclockwise)
Preceding gene: 15668702
Following gene: 15668700
Centisome position: 27.77
GC content: 34.86
Gene sequence:
>657_bases ATGATTGAATCAATAACTGGCTATCTATTTGGAATTGTTCCATTTGGAGACATTGTATTTGGCTTTTCAGAATTTTCAAT TATTGGATTTATCACTGCAGTAATATTTACCATCATAGTTTATTTAACAAAGCCAGAAAAGCAGTTAGAAGCTCAAAAAT TTAAAATTGAAGATAAATTAGAGGTAGTAACACTAAATGAGTTAAAAATTAGGAGAATGATGGCTATTGTCTGCGGAATA GCAACTGCTGGAGCTATGCTAACTTATGATTTGTTTGATTATGCCTTATTCTTAACTTTAGTTGGGATTGCAAATATAGG TATTGTCTCAGCAGTTAAAAGAGAATGGGTGTTAAATGCAAGTTATCAGTATGGACTTATAGCGATGATTGCCACCCTTC CATTATTTGGTTCTGCAGGGATGATATTGGCTAAAACAGGGACATTATCAATCTTTGAACTGCCAAAAATACAAACATCC CTATTATTTGAAAAAATTATATTTGCCGCTGGAATGGCTGGAGAAACTGGGATAGCTCCCTTCTATGCTGCAAAGGCGGA GATGTTTAGAGCTCCTGGCTCACCATACATATTGATGATACACCTCTCCTCACTGTTGTTGATTGTAAGGACTGTTGAGA TTCTATTGACAATTTAA
Upstream 100 bases:
>100_bases GCATAGGAGGAGACCTCCTATTGCTATACCACCCGTCCATTAAGTTAGGGCTTTCAGCCCTAATTAATGTCCATTATTTA ATAAAATTAGGTGAGATAAA
Downstream 100 bases:
>100_bases AATACTTTAGGTGAAAAACATGGATGAAGAGAGAAAATATGGATTATATTCATTGATTATTGGTTTGTTGTGTGTTATTG GGATTGTTATGCTTAATGGG
Product: NADH dehydrogenase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIESITGYLFGIVPFGDIVFGFSEFSIIGFITAVIFTIIVYLTKPEKQLEAQKFKIEDKLEVVTLNELKIRRMMAIVCGI ATAGAMLTYDLFDYALFLTLVGIANIGIVSAVKREWVLNASYQYGLIAMIATLPLFGSAGMILAKTGTLSIFELPKIQTS LLFEKIIFAAGMAGETGIAPFYAAKAEMFRAPGSPYILMIHLSSLLLIVRTVEILLTI
Sequences:
>Translated_218_residues MIESITGYLFGIVPFGDIVFGFSEFSIIGFITAVIFTIIVYLTKPEKQLEAQKFKIEDKLEVVTLNELKIRRMMAIVCGI ATAGAMLTYDLFDYALFLTLVGIANIGIVSAVKREWVLNASYQYGLIAMIATLPLFGSAGMILAKTGTLSIFELPKIQTS LLFEKIIFAAGMAGETGIAPFYAAKAEMFRAPGSPYILMIHLSSLLLIVRTVEILLTI >Mature_218_residues MIESITGYLFGIVPFGDIVFGFSEFSIIGFITAVIFTIIVYLTKPEKQLEAQKFKIEDKLEVVTLNELKIRRMMAIVCGI ATAGAMLTYDLFDYALFLTLVGIANIGIVSAVKREWVLNASYQYGLIAMIATLPLFGSAGMILAKTGTLSIFELPKIQTS LLFEKIIFAAGMAGETGIAPFYAAKAEMFRAPGSPYILMIHLSSLLLIVRTVEILLTI
Specific function: Unknown
COG id: COG4078
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y522_METJA (Q57942)
Other databases:
- EMBL: L77117 - PIR: B64365 - RefSeq: NP_247500.1 - GeneID: 1451386 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0522 - NMPDR: fig|243232.1.peg.537 - TIGR: MJ0522 - HOGENOM: HBG539584 - OMA: EMFRAPG - ProtClustDB: CLSK876224 - BioCyc: MJAN243232:MJ_0522-MONOMER - InterPro: IPR017059 - PIRSF: PIRSF036536
Pfam domain/function: PF10125 NADHdeh_related
EC number: NA
Molecular weight: Translated: 23897; Mature: 23897
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xcf354ac)-; HASH(0xc930ce0)-; HASH(0xc859034)-; HASH(0xb9e5360)-; HASH(0xd067f14)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESITGYLFGIVPFGDIVFGFSEFSIIGFITAVIFTIIVYLTKPEKQLEAQKFKIEDKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCE EVVTLNELKIRRMMAIVCGIATAGAMLTYDLFDYALFLTLVGIANIGIVSAVKREWVLNA EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYQYGLIAMIATLPLFGSAGMILAKTGTLSIFELPKIQTSLLFEKIIFAAGMAGETGIAP CCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH FYAAKAEMFRAPGSPYILMIHLSSLLLIVRTVEILLTI HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MIESITGYLFGIVPFGDIVFGFSEFSIIGFITAVIFTIIVYLTKPEKQLEAQKFKIEDKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCE EVVTLNELKIRRMMAIVCGIATAGAMLTYDLFDYALFLTLVGIANIGIVSAVKREWVLNA EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYQYGLIAMIATLPLFGSAGMILAKTGTLSIFELPKIQTSLLFEKIIFAAGMAGETGIAP CCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH FYAAKAEMFRAPGSPYILMIHLSSLLLIVRTVEILLTI HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087