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The map label for this gene is tolB

Identifier: 15645740

GI number: 15645740

Start: 1190763

End: 1192016

Strand: Reverse

Name: tolB

Synonym: HP1126

Alternate gene names: 15645740

Gene position: 1192016-1190763 (Counterclockwise)

Preceding gene: 15645741

Following gene: 15645739

Centisome position: 71.47

GC content: 37.88

Gene sequence:

>1254_bases
ATGAGGTATTTATGGCTTTTTTTAATACACACTATAGGGCTTTTTGCAACAGATAAAACACTAGATATTATTAAAACCAT
TCAAAAACTTCCTAAGATTGAAGTGCGCTACTCTATAGATAACGATGCCAATTACGCTTTAAAATTGCATGAAGTCTTGG
CGAATGATTTAAAGACTAGCCAGCATTTTGATGTTTCTCAAAACAAGGATCAAGGTGCTATCAATTACGCAGAACTCAAG
GATAAAAAAGTCCATCTCGTAGCGCTTGTGAGCGTGGCGGTAGAAAACGGCAATAAAATTTCACGATTAAAACTTTATGA
TGTGGATACAGGAACGCTCAAAAAGACTTTTGACTACCCTATTGTAAGTTTAGATCTATACCCTTTTGCAGCGCACAACA
TGGCTATTGTGGTGAATGACTATTTAAAAGCCCCTTCTATCGCTTGGATGAAGCGCCTTATTGTTTTTTCTAAATACATT
GGACCAGGAATCACAAATATCGCACTAGCGGATTATACGATGCGTTATCAAAAAGAAATCATCAAAAACAATAGGCTCAA
TATCTTCCCTAAATGGGCGAACGCTGAGCAAACGGAGTTTTATTACACGCAGTATGGCGAAAGAACGCCCATGATTTTAA
AATACAACATTCAAAAAGCCACTCATGAGAATATCGCTAGCTCTCAAGGAATGGCTGTGGTCTCTAGCGTGAGTTCTGAT
GGCTCTAAAATTTTAATGTCTTTAGCCCCTGATGGCCAACCGGATGTGTATTTGTATGACACGCATAAAAAAACTAAAAC
TAAAATAACGCGCTATCCGGGGATAGATGTCTCAGGAGTGTTTTTAGAAGATGACAAGTCTATGGCTTTTGTTTCGGATA
GATCCGGTTATCCTAACATCTACATGAAGAAATTGGGGTTAAAAGAGAGCGCGGAGCAACTCCTTTATGAAGGGAGAAGC
AATGAATCCATTGACGCTTATAAAGATAGTATTGTGTATGTGAGCCGGGAAAACCTTAATGAATTTGGCAAAACGGTGTT
TAATTTGAATTTGATCACCTTAAATAGCAAATATATCCGCAGGCTTACCGTGAATGGCTCTAACCAGATGCCTCGTTTTT
CTACGGATGGGAGAAATATCATGTATATCAAAAAGACACCCCAAGAATACGCCATGGGGCTTATTTTGCTAGATTATAAT
CAGAGTTTTTTATTCCCTTTAAAGAATGTGAAAATACAAGCCTTTGATTGGTAA

Upstream 100 bases:

>100_bases
TGATGACCCTTTTAAATGATTTAAAGAAAGTGGATTTTCCCCCATATCCTGGAGGAAGCATGATTTCTATTCAAGTTAAT
TTCACCACTAAGGAAGAACA

Downstream 100 bases:

>100_bases
GGTTAAATTAAGCGAATGTGAGTTAATATTTACACTTATTAAAATTTGATTCTTGGAGAATTTATAATGAAGAGATCTTC
TGTATTTAGTTTCTTGGTAG

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRYLWLFLIHTIGLFATDKTLDIIKTIQKLPKIEVRYSIDNDANYALKLHEVLANDLKTSQHFDVSQNKDQGAINYAELK
DKKVHLVALVSVAVENGNKISRLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYI
GPGITNIALADYTMRYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATHENIASSQGMAVVSSVSSD
GSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRS
NESIDAYKDSIVYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN
QSFLFPLKNVKIQAFDW

Sequences:

>Translated_417_residues
MRYLWLFLIHTIGLFATDKTLDIIKTIQKLPKIEVRYSIDNDANYALKLHEVLANDLKTSQHFDVSQNKDQGAINYAELK
DKKVHLVALVSVAVENGNKISRLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYI
GPGITNIALADYTMRYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATHENIASSQGMAVVSSVSSD
GSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRS
NESIDAYKDSIVYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN
QSFLFPLKNVKIQAFDW
>Mature_417_residues
MRYLWLFLIHTIGLFATDKTLDIIKTIQKLPKIEVRYSIDNDANYALKLHEVLANDLKTSQHFDVSQNKDQGAINYAELK
DKKVHLVALVSVAVENGNKISRLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYI
GPGITNIALADYTMRYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATHENIASSQGMAVVSSVSSD
GSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRS
NESIDAYKDSIVYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN
QSFLFPLKNVKIQAFDW

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 47799; Mature: 47799

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLWLFLIHTIGLFATDKTLDIIKTIQKLPKIEVRYSIDNDANYALKLHEVLANDLKTS
CEEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHCCC
QHFDVSQNKDQGAINYAELKDKKVHLVALVSVAVENGNKISRLKLYDVDTGTLKKTFDYP
CCCCCCCCCCCCCEEHHHCCCCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEECCCC
IVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALADYTMRYQKEI
EEEEEECEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
IKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATHENIASSQGMAVVSSVSSD
HCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCEEEEEECCCC
GSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNI
CCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCE
YMKKLGLKESAEQLLYEGRSNESIDAYKDSIVYVSRENLNEFGKTVFNLNLITLNSKYIR
EEECCCCHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCHHHHCCEEEEEEEEEECCCEEE
RLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYNQSFLFPLKNVKIQAFDW
EEEECCCCCCCCCCCCCCEEEEEEECCHHHCEEEEEEECCCCEEEEECCCEEEEECC
>Mature Secondary Structure
MRYLWLFLIHTIGLFATDKTLDIIKTIQKLPKIEVRYSIDNDANYALKLHEVLANDLKTS
CEEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHCCC
QHFDVSQNKDQGAINYAELKDKKVHLVALVSVAVENGNKISRLKLYDVDTGTLKKTFDYP
CCCCCCCCCCCCCEEHHHCCCCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEECCCC
IVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALADYTMRYQKEI
EEEEEECEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
IKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATHENIASSQGMAVVSSVSSD
HCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCEEEEEECCCC
GSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNI
CCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCE
YMKKLGLKESAEQLLYEGRSNESIDAYKDSIVYVSRENLNEFGKTVFNLNLITLNSKYIR
EEECCCCHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCHHHHCCEEEEEEEEEECCCEEE
RLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYNQSFLFPLKNVKIQAFDW
EEEECCCCCCCCCCCCCCEEEEEEECCHHHCEEEEEEECCCCEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA