Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15645709

GI number: 15645709

Start: 1156724

End: 1158007

Strand: Reverse

Name: Not Available

Synonym: HP1095

Alternate gene names: 15645709

Gene position: 1158007-1156724 (Counterclockwise)

Preceding gene: 15645711

Following gene: 15645707

Centisome position: 69.43

GC content: 36.84

Gene sequence:

>1284_bases
TTGCTTAACGCTATCAAGTTTAGAATTTATCCTAACGCCCAACAAAAAGAATTGATTTCTAAACATTTTGGCTGTTCTAG
AGTCGTGTATAACTACTTTTTAGATTACCGGCAAAAGCAATACGCAAAAGGCATTAAAGAAACTTACTTCACCATGCAAA
AAGTCTTAACCCAAATCAAGCGGCAAGAAAAATACCATTACCTCAATGAATGCAATTCTCAAAGCTTGCAAATGGCGTTA
AGACAGCTGGTGAGCGCTTATGATAATTTCTTTAGCAAAAGAGCGAGATACCCTAAATTCAAATCCAAGAAAAACGCTAA
ACAATCTTTTGCAATCCCTCAAAACATAGAAACCAAAACAGAAACTCAAACCATCGCTCTCCCTAAATTCAAAGAGGGCA
TTAAGGCTAAATTACACAGAGATTTGCCTAAAGATAGCGTTATCAAACAGGCTTTTATTTCTTGCATAGCGGATCAATAT
TTTTGTTCTCTATCCTATGAAACCAAAGAGCCTATCCCTAAACCCACCATTATCAAAAAAGCGGTAGGTTTAGACATGGG
CTTAAGAACGCTCATTGTTACAAGCGATAAAATAGGATACCCACACATTCGTTTTTATCAAAAACTAGAAAAGAAACTCA
CTAAAGCGCAAAGGAGGTTAAGTAAAAAAGTAAAAGATTCCAACAACAGGAAAAAACAAGCTAAAAAGGTATCCAGATTG
CATTTAGCTTGTTCAAACACTAGAGATGACTACTTGCATAAAATCAGTAATGAGATAACCAATCAATACGATCTGATAGG
AGTAGAAACCTTGAATGTTAAAGCTCTTATGAGAACCTATCATTCTAAAAGCCTTGCTAATGCGAGTTGGGGGAAATTTC
TTACTATGCTAGAGTATAAAGCCCAAAGAAAAGGCAAAACCCTCTTATCCATAGACAGATTTTTCCCTAGCTCTCAATTG
TGTTCTTATTGTGGGGTCAATACAGGCAAAAAACATGAAAGCATCACTAAATTCACTTGTCCTCATTGTCAAACCACACA
CCACAGAGATTATAATGCGAGCGTCAATATCAGAAACTACGCTTTAGGCATGCTAGATGATAGGCATAAAGTAAAGACAG
ATAAAGCTAGGGTAGGGATTATCCGAAGCGATTACACTCATCACACTAATGAGTGTGTCAAAGCTTGTGGAGCTTCCTCT
AACGGGGTTAGTTCTAAATATGGAAACATATTGGATCTAGCTAGTTATGGAGCTATGAAGCAAGAAAAAGCCCAATCGCT
TTAG

Upstream 100 bases:

>100_bases
ACCCCCTTAATGGATAATGGTTTTTCCTCATTCCTCTATCCTTATTCATTATTTATAAAAACATTGTATAATAATAAAAG
ATAAAGATAAGGAGTTATTT

Downstream 100 bases:

>100_bases
CGGTTGGGTAATTCAAGTCTAGTATGTTTATTTTGCTATTGTCAATTGAATTTCTATCTTTTTTATCCCAATGCCCTTGT
TCTACTATGGCTAAATGATT

Product: IS605 transposase (tnpB)

Products: NA

Alternate protein names: ORF401 [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMAL
RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQY
FCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL
HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYKAQRKGKTLLSIDRFFPSSQL
CSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL

Sequences:

>Translated_427_residues
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMAL
RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQY
FCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL
HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYKAQRKGKTLLSIDRFFPSSQL
CSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>Mature_427_residues
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMAL
RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQY
FCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL
HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYKAQRKGKTLLSIDRFFPSSQL
CSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=352, Percent_Identity=30.9659090909091, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 49264; Mature: 49264

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure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HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7665509 [H]