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The map label for this gene is 15607120

Identifier: 15607120

GI number: 15607120

Start: 1538598

End: 1539395

Strand: Direct

Name: 15607120

Synonym: aq_2189

Alternate gene names: NA

Gene position: 1538598-1539395 (Clockwise)

Preceding gene: 15607119

Following gene: 15607121

Centisome position: 99.18

GC content: 39.6

Gene sequence:

>798_bases
ATGAGAATTCTTCTCTCTTTCCTCTTTCTTATTACTCTTGTTTTCGGAGGAGCTGTTGGACCTTCCAACAAAGCATTTGA
TGACAACGATATGTTCAATCCCGAAATACTAAAAATCAATGAAAAACAATACCTCGGAAATTTTGTTCCGAATGTTGAAG
TAATCTTAGAAGACGGAACGAAAACGGATCTGTACACCTTAATAAAAGAAAAACCCACTATACTCCTTCTTTCCTACTAC
ACCTGTGAGGGTACCTGCCCTGTAAGGGTTGACAACTTAAAGAAGTTAATCGACGAAACGGATTTAAAAGACAGAGATTT
TATGGTTCTCAACCTCTCTTTTGACGAGAGGGATGACCTCCAAACTTTGAAGGAATTTGTAAAACTACACGGGCCTTTCA
CTAAACACTGGGTGTTCGGAATAATCGATAAAGAAAATATAGAAAAACTTACTAACTCCGTAGGGTTCAAGTTCTTCTTC
GTGGAGAGGGACAAGACATTTGTGCATCCAAACGTTTACATCTTCCTTTCCCCTGAAGGGAGGATAACGAGGTATCTCTG
GGGAGTAAAGCCAAGCTACAGAGATGTGAGAATAGCCCTTGCGGAAAGTACACAAAACAAGATAACTGTAAACTCCATAG
TAGATCTCGCTTACATAGCCTGTTTTACTTACGATCCTTCAAGGAGTAGATACGTCATAAATCCGACTTTGCTCTTTGGT
GGTATTGGTTTTTCTGCTTTAGGTTTGGTCGTGCTATCTGGTCTTTTGATGAATAAACTTAGGAAGAAGGAGGTGTAG

Upstream 100 bases:

>100_bases
ACGGTTCTCAGGGCTACTTCTGCATATTGGCACTTCGTAGACTTCATGTGGCTCCTCGTAGCAGGTTCTGTTTACATAAT
CGGAACCTTAGGGGTGTAAG

Downstream 100 bases:

>100_bases
TCATGGAGCAAGTTATTGCACTGCCCTATAAGTGGTGGGCAGAGGCTGTAACTGTCTGGCTTATAGTAGCCGTAGTGATC
TATTTAATCGTCGCAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: SCO1/SenC/PrrC Family Protein; SCO1/SenC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRILLSFLFLITLVFGGAVGPSNKAFDDNDMFNPEILKINEKQYLGNFVPNVEVILEDGTKTDLYTLIKEKPTILLLSYY
TCEGTCPVRVDNLKKLIDETDLKDRDFMVLNLSFDERDDLQTLKEFVKLHGPFTKHWVFGIIDKENIEKLTNSVGFKFFF
VERDKTFVHPNVYIFLSPEGRITRYLWGVKPSYRDVRIALAESTQNKITVNSIVDLAYIACFTYDPSRSRYVINPTLLFG
GIGFSALGLVVLSGLLMNKLRKKEV

Sequences:

>Translated_265_residues
MRILLSFLFLITLVFGGAVGPSNKAFDDNDMFNPEILKINEKQYLGNFVPNVEVILEDGTKTDLYTLIKEKPTILLLSYY
TCEGTCPVRVDNLKKLIDETDLKDRDFMVLNLSFDERDDLQTLKEFVKLHGPFTKHWVFGIIDKENIEKLTNSVGFKFFF
VERDKTFVHPNVYIFLSPEGRITRYLWGVKPSYRDVRIALAESTQNKITVNSIVDLAYIACFTYDPSRSRYVINPTLLFG
GIGFSALGLVVLSGLLMNKLRKKEV
>Mature_265_residues
MRILLSFLFLITLVFGGAVGPSNKAFDDNDMFNPEILKINEKQYLGNFVPNVEVILEDGTKTDLYTLIKEKPTILLLSYY
TCEGTCPVRVDNLKKLIDETDLKDRDFMVLNLSFDERDDLQTLKEFVKLHGPFTKHWVFGIIDKENIEKLTNSVGFKFFF
VERDKTFVHPNVYIFLSPEGRITRYLWGVKPSYRDVRIALAESTQNKITVNSIVDLAYIACFTYDPSRSRYVINPTLLFG
GIGFSALGLVVLSGLLMNKLRKKEV

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30390; Mature: 30390

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLSFLFLITLVFGGAVGPSNKAFDDNDMFNPEILKINEKQYLGNFVPNVEVILEDGT
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCEEEEEECCC
KTDLYTLIKEKPTILLLSYYTCEGTCPVRVDNLKKLIDETDLKDRDFMVLNLSFDERDDL
CHHHHHHHHCCCCEEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
QTLKEFVKLHGPFTKHWVFGIIDKENIEKLTNSVGFKFFFVERDKTFVHPNVYIFLSPEG
HHHHHHHHHCCCCCHHEEEEEECHHHHHHHHHHCCEEEEEEECCCEEECCEEEEEECCCC
RITRYLWGVKPSYRDVRIALAESTQNKITVNSIVDLAYIACFTYDPSRSRYVINPTLLFG
CEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHEEEEECCCCCEEEECCEEEEC
GIGFSALGLVVLSGLLMNKLRKKEV
CCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRILLSFLFLITLVFGGAVGPSNKAFDDNDMFNPEILKINEKQYLGNFVPNVEVILEDGT
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCEEEEEECCC
KTDLYTLIKEKPTILLLSYYTCEGTCPVRVDNLKKLIDETDLKDRDFMVLNLSFDERDDL
CHHHHHHHHCCCCEEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
QTLKEFVKLHGPFTKHWVFGIIDKENIEKLTNSVGFKFFFVERDKTFVHPNVYIFLSPEG
HHHHHHHHHCCCCCHHEEEEEECHHHHHHHHHHCCEEEEEEECCCEEECCEEEEEECCCC
RITRYLWGVKPSYRDVRIALAESTQNKITVNSIVDLAYIACFTYDPSRSRYVINPTLLFG
CEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHEEEEECCCCCEEEECCEEEEC
GIGFSALGLVVLSGLLMNKLRKKEV
CCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA