Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is yhbN [C]

Identifier: 15607109

GI number: 15607109

Start: 1530315

End: 1530749

Strand: Direct

Name: yhbN [C]

Synonym: aq_2173

Alternate gene names: 15607109

Gene position: 1530315-1530749 (Clockwise)

Preceding gene: 15607108

Following gene: 15607110

Centisome position: 98.65

GC content: 42.3

Gene sequence:

>435_bases
ATGAAGTGGAAAGCATTCATACTACTTCTTAGCTTTATCGGTTTCTCCCTTTCCCAGACTATAACGGGAGAAGCAAACTC
CTTAGAATTTCTAAAGGACAGACTCATTTACAAAGGGAACGTAATACTCCACAGGGACAGCTCAACGCTGAAAGCGGACG
AAGTGGTAATACTCCTTGACAAAGAAAACAAGCCCTACAAGCTTATCGCAAAGGGAAATGTAAAGTTCAGGGAAAACGGA
AGGAAGGCAGAGGCGGAATTTGCTGAGTACGACTTGAGGAAGGAAATAATACATCTAAAGGGAAATGCAAAGATTGAAGA
AAACGGCAGAGTCGTGGAAGCGGATGAAATAATTATTTACAAGAGGGAAAAGAGGCTTGTGGCTAAAGGTAAGGGAAAGA
GAGTGAGAACCGTTTACGTGGAGGAGAAGAAATGA

Upstream 100 bases:

>100_bases
ATATCGTGGGGTTACAACGAACTCATCCTCAGAAAAGATACAAACGTTATAAAGGGCAGAGGGTTTAAAATATTCTTTAA
GCCCTTCAAGGTGCAAATAA

Downstream 100 bases:

>100_bases
CGAAATCAGATATAGCTAAGGAACTCGCAAGGAGGCACGGCATATCCTACAAAAAAGCCCTCCTTATAGTCAACATGACC
TTTGAGATACTAAAAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKWKAFILLLSFIGFSLSQTITGEANSLEFLKDRLIYKGNVILHRDSSTLKADEVVILLDKENKPYKLIAKGNVKFRENG
RKAEAEFAEYDLRKEIIHLKGNAKIEENGRVVEADEIIIYKREKRLVAKGKGKRVRTVYVEEKK

Sequences:

>Translated_144_residues
MKWKAFILLLSFIGFSLSQTITGEANSLEFLKDRLIYKGNVILHRDSSTLKADEVVILLDKENKPYKLIAKGNVKFRENG
RKAEAEFAEYDLRKEIIHLKGNAKIEENGRVVEADEIIIYKREKRLVAKGKGKRVRTVYVEEKK
>Mature_144_residues
MKWKAFILLLSFIGFSLSQTITGEANSLEFLKDRLIYKGNVILHRDSSTLKADEVVILLDKENKPYKLIAKGNVKFRENG
RKAEAEFAEYDLRKEIIHLKGNAKIEENGRVVEADEIIIYKREKRLVAKGKGKRVRTVYVEEKK

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16654; Mature: 16654

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKAFILLLSFIGFSLSQTITGEANSLEFLKDRLIYKGNVILHRDSSTLKADEVVILLD
CCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCEEEECCEEEECCCCCCCCCEEEEEEE
KENKPYKLIAKGNVKFRENGRKAEAEFAEYDLRKEIIHLKGNAKIEENGRVVEADEIIIY
CCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHEEEEECCCCEECCCCCEEECCEEEEE
KREKRLVAKGKGKRVRTVYVEEKK
ECCCEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MKWKAFILLLSFIGFSLSQTITGEANSLEFLKDRLIYKGNVILHRDSSTLKADEVVILLD
CCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCEEEECCEEEECCCCCCCCCEEEEEEE
KENKPYKLIAKGNVKFRENGRKAEAEFAEYDLRKEIIHLKGNAKIEENGRVVEADEIIIY
CCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHEEEEECCCCEECCCCCEEECCEEEEE
KREKRLVAKGKGKRVRTVYVEEKK
ECCCEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA