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The map label for this gene is mreD [H]

Identifier: 15603822

GI number: 15603822

Start: 2196549

End: 2197037

Strand: Direct

Name: mreD [H]

Synonym: PM1957

Alternate gene names: 15603822

Gene position: 2196549-2197037 (Clockwise)

Preceding gene: 15603821

Following gene: 15603839

Centisome position: 97.3

GC content: 41.1

Gene sequence:

>489_bases
ATGCAAAAGCGTTTTATCCTACAATGGCTAATTTTGATTTGTACTTTTATTGTGGCGTTGGTGATGGAAATTGCCCCTTG
GCCAACGGACTTCCAAAATTTTAAGCCGGCGTGGTTAGTACTGGTTTTGCTCTATTGGACACTTGCGCTGCCAAATAAAG
TGAGTATAGGATCGGCGTTTGTGCTTGGGGTGATTTGGGACTTAGTGCTTGGTTCTATTTTAGGGGTACATGCGTTAGTC
TTATCGCTTTTTACCTATTTAGTCGCGCTTAATCATTTAGTCCTACGTAATCTATCGCTCTGGATGCAAAGCTTGTTGGT
CATTATCTTTGTTTTCTCGATTCGCTTCAGTATTTTTCTCATTGAATTACTTTTGCATAGCGCATCATTTAATTGGCAAG
AAAGTTATGGCGCATTGGCGAGCGGGCTGTTATGGCCGTGGGTCTTTTTACTTTTACGCAAAATTCGTCGCCAATTACAG
CTACATTAA

Upstream 100 bases:

>100_bases
ATCCTGTGGAAGCAGACGAGCCGAGTCCAGTATTGGAAAATCCTGCTGAAAATCATCCATTACCGACGGTAACAGAATCA
CCGTCGAGAGAGGAACCGTA

Downstream 100 bases:

>100_bases
CCTATTTGTATTGCACGTTTTAGGCATAGTGGTCTGTTTCTTCCACTACTTGCCCTTTACGCCATTCTATCGTACTAAAT
AAGCCGAGTGAATTATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQKRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAFVLGVIWDLVLGSILGVHALV
LSLFTYLVALNHLVLRNLSLWMQSLLVIIFVFSIRFSIFLIELLLHSASFNWQESYGALASGLLWPWVFLLLRKIRRQLQ
LH

Sequences:

>Translated_162_residues
MQKRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAFVLGVIWDLVLGSILGVHALV
LSLFTYLVALNHLVLRNLSLWMQSLLVIIFVFSIRFSIFLIELLLHSASFNWQESYGALASGLLWPWVFLLLRKIRRQLQ
LH
>Mature_162_residues
MQKRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAFVLGVIWDLVLGSILGVHALV
LSLFTYLVALNHLVLRNLSLWMQSLLVIIFVFSIRFSIFLIELLLHSASFNWQESYGALASGLLWPWVFLLLRKIRRQLQ
LH

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreD family [H]

Homologues:

Organism=Escherichia coli, GI1789647, Length=148, Percent_Identity=43.2432432432432, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007227 [H]

Pfam domain/function: PF04093 MreD [H]

EC number: NA

Molecular weight: Translated: 18776; Mature: 18776

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
VLGVIWDLVLGSILGVHALVLSLFTYLVALNHLVLRNLSLWMQSLLVIIFVFSIRFSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELLLHSASFNWQESYGALASGLLWPWVFLLLRKIRRQLQLH
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
VLGVIWDLVLGSILGVHALVLSLFTYLVALNHLVLRNLSLWMQSLLVIIFVFSIRFSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELLLHSASFNWQESYGALASGLLWPWVFLLLRKIRRQLQLH
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]