Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602195
Identifier: 15602195
GI number: 15602195
Start: 383792
End: 384556
Strand: Reverse
Name: 15602195
Synonym: PM0330
Alternate gene names: NA
Gene position: 384556-383792 (Counterclockwise)
Preceding gene: 15602197
Following gene: 15602194
Centisome position: 17.03
GC content: 36.99
Gene sequence:
>765_bases ATGTCCATTAATTTTACAAAAATTTTTCAAGATAGCTGGAATTTTGTGCGCAATCAGCGCCAAACGACTTTCACATTTGT ATTTGCTTTTTTTCTCAGTAATTTTCTAATTAGTTTATTGATAAGTAGCTTTTCATCAACTGAAGTGATGTCACTAAGCA ATAGTAGTGACGATTTAGCCCAAGTTTTAGGCATCTCCACGCCTGCCCCCAATGACATATCCTTATATTTTTTTCACCAA ATCCTTGATTTTATCATTGCGGCATGGTGCTTGATTTCTATCCATCACATTAGTCAAAGTAACCCTTCTCTCAATGCCAG TTTTAGCTTAGCATTGCAGCGTTTCTTCGGCGCCCTTATCATTAATATCCTATTAATCACCCCAATTATTATTGGTTTAT CTGAAATCTTTTTCTCATTAACTGTGAAGAAATCACAACCCTCGATGTTTTCCTTGCTGTCTGTGGGATTCGGTTTTTAT CTGTGCATCCGTTTTTGTTTAACATCGACACATTACCTAATCACGCGTGAGGGGCTAATCCAATCATTCCAAACAACATG GAAAGCGGGGATCAAACGAGTTATCCCATTATTTTCATATTCCATGATTGTGTATTTCTTATTACCCGTAGTGATCCGCC AATTCGCAGCAATCGCAAGCAATTTAATCGTAGAAATCGCCGTTGCCTTGTTAATTGCATTTTTAACCGTCTTCTCATTG GTTTTCACTTACCGTTTCTATACTATTTTTATGCAAAAGGCGTAA
Upstream 100 bases:
>100_bases CAAAAAGAATCCGTAATAAAAAAACGCACATTTGGTATGAATTTTGGCGTAAAAAACGGTATAATGCGCCAATCTGTTGT CCTAAAATGAGTGTTTATAA
Downstream 100 bases:
>100_bases ACCAACATGAAACAATTATTAGAATTTATTCCACTTATTTTGTTCTTTGCGGTGTACAAGCTCGTGGGCATCCGCGAAGC CGCAATTACCTTGATCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSINFTKIFQDSWNFVRNQRQTTFTFVFAFFLSNFLISLLISSFSSTEVMSLSNSSDDLAQVLGISTPAPNDISLYFFHQ ILDFIIAAWCLISIHHISQSNPSLNASFSLALQRFFGALIINILLITPIIIGLSEIFFSLTVKKSQPSMFSLLSVGFGFY LCIRFCLTSTHYLITREGLIQSFQTTWKAGIKRVIPLFSYSMIVYFLLPVVIRQFAAIASNLIVEIAVALLIAFLTVFSL VFTYRFYTIFMQKA
Sequences:
>Translated_254_residues MSINFTKIFQDSWNFVRNQRQTTFTFVFAFFLSNFLISLLISSFSSTEVMSLSNSSDDLAQVLGISTPAPNDISLYFFHQ ILDFIIAAWCLISIHHISQSNPSLNASFSLALQRFFGALIINILLITPIIIGLSEIFFSLTVKKSQPSMFSLLSVGFGFY LCIRFCLTSTHYLITREGLIQSFQTTWKAGIKRVIPLFSYSMIVYFLLPVVIRQFAAIASNLIVEIAVALLIAFLTVFSL VFTYRFYTIFMQKA >Mature_253_residues SINFTKIFQDSWNFVRNQRQTTFTFVFAFFLSNFLISLLISSFSSTEVMSLSNSSDDLAQVLGISTPAPNDISLYFFHQI LDFIIAAWCLISIHHISQSNPSLNASFSLALQRFFGALIINILLITPIIIGLSEIFFSLTVKKSQPSMFSLLSVGFGFYL CIRFCLTSTHYLITREGLIQSFQTTWKAGIKRVIPLFSYSMIVYFLLPVVIRQFAAIASNLIVEIAVALLIAFLTVFSLV FTYRFYTIFMQKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28835; Mature: 28704
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINFTKIFQDSWNFVRNQRQTTFTFVFAFFLSNFLISLLISSFSSTEVMSLSNSSDDLA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHH QVLGISTPAPNDISLYFFHQILDFIIAAWCLISIHHISQSNPSLNASFSLALQRFFGALI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH INILLITPIIIGLSEIFFSLTVKKSQPSMFSLLSVGFGFYLCIRFCLTSTHYLITREGLI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QSFQTTWKAGIKRVIPLFSYSMIVYFLLPVVIRQFAAIASNLIVEIAVALLIAFLTVFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTYRFYTIFMQKA HHHHHHHHHHHHCC >Mature Secondary Structure SINFTKIFQDSWNFVRNQRQTTFTFVFAFFLSNFLISLLISSFSSTEVMSLSNSSDDLA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHH QVLGISTPAPNDISLYFFHQILDFIIAAWCLISIHHISQSNPSLNASFSLALQRFFGALI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH INILLITPIIIGLSEIFFSLTVKKSQPSMFSLLSVGFGFYLCIRFCLTSTHYLITREGLI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QSFQTTWKAGIKRVIPLFSYSMIVYFLLPVVIRQFAAIASNLIVEIAVALLIAFLTVFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTYRFYTIFMQKA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]