Click here to switch to the map view.

The map label for this gene is oapA [H]

Identifier: 15601963

GI number: 15601963

Start: 123125

End: 124291

Strand: Reverse

Name: oapA [H]

Synonym: PM0098

Alternate gene names: 15601963

Gene position: 124291-123125 (Counterclockwise)

Preceding gene: 15601964

Following gene: 15601960

Centisome position: 5.51

GC content: 42.59

Gene sequence:

>1167_bases
GTGGATTCAGAAAAACACACTCCAGAAAATCAACACAATCCAGAACAAAGCGAACTGGATTTAGAATTTAGCCAAGTCGA
GCCAATTACGCCCAAAAAAATGGCTAAACCGACGCCCTCTTTTTTTGATAGCGTAAAAGGTGTTTTTGCTAAAAAAACAT
CACATGACGCGGCATTAAAGACAACGCGTCAAGCCCCTGCATTTAATGAAGCCACCTCTTCATCAAATACACAAACTGAT
TTAAATGCCGATGAACTGACTAGCGAACAGCCAACCTCAGAAGATATGGGCGCTGCTGTTGTTGCGTCAGCAGTAAACTG
GAAAAACCCAGAAACTTGGCCATTCCTACAAATTCTGCCACAACGTCATCGCCGTTTATTTGTCGCGTTATTTGGTCTGA
TTTTATTATTAATTATTTTCTTTGCCCTCAAGCCAAGTTCACAAACGGTCCAATCGTTTGAGCAACAAAACAGTCAAGCC
GTGCCTATTCAATTTCAGCCGTTAGAAAAAGGTCAAACTGTTGAAAATACGATTTTAGATAACTTAAATCAGCCTGCAGA
CAACAGCGCAAGTGCAACACAAGATAATACCGTGACAAGCGCGGTCACCTCAGAAACTCAACCCACATCGTCTGCCAGTG
GGACAGAGAGCACGCCAACGGCAATAGCACCTACAAAAGTGGAACAACCGGTGGCACCTAAAATGGGGGCGGCTGACGCA
GACAAACCAAGCGCTGTAGAAAAAGTCGTGAATGAAAAAGTCACGAATGAAAAAGTAGTGACTGAAAAACCTAAAACAGT
AGAAAAACCTAAAGCGGTAGAAAAAGCCAAAGTCCCAGAAAAACCAACGCATATTGAAAAAGCGAAGGTGGAGAAAAAAG
TCGCTCCCGTTGTGGACGCTAACCCAGCGAAAGCAAGTAATAGCAAAACCTTAACGATTCCACAGGGTGTCAGCTTAATG
CAAGTATTCCGTAACCATAATTTAAATATTGCGGATGTCAATGCGATGACAAAAGCGTCAGGGGCAGGTAACGCACTGAG
TAACTTCAAAGCTGGCGATAAAGTGCAAATTTCCGTGAATAGTCAAGGGCGAGTTAACGAGCTCCGTTTAGAAAATGGTG
CTAAATTTATTCGCCAAGCCGATGGCAGTTATATTTATAAAAAATAA

Upstream 100 bases:

>100_bases
AGCATAGGAAAATCAACAAATATCCTTTAGAATAACCTAAATTTTGACCGCACTTTCAGTGTATATCAGTAAGCTAGCTA
TTTAGAATCGAGGTACTATC

Downstream 100 bases:

>100_bases
CAAGACCATATAAAACAAAGCCCGTGATGAGAAAATCAACACGGGCTTTTTGTTCATATTGGTATCTATTCGCTTGCTAT
CACAGCAAATACTCTGGCAT

Product: OapA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MDSEKHTPENQHNPEQSELDLEFSQVEPITPKKMAKPTPSFFDSVKGVFAKKTSHDAALKTTRQAPAFNEATSSSNTQTD
LNADELTSEQPTSEDMGAAVVASAVNWKNPETWPFLQILPQRHRRLFVALFGLILLLIIFFALKPSSQTVQSFEQQNSQA
VPIQFQPLEKGQTVENTILDNLNQPADNSASATQDNTVTSAVTSETQPTSSASGTESTPTAIAPTKVEQPVAPKMGAADA
DKPSAVEKVVNEKVTNEKVVTEKPKTVEKPKAVEKAKVPEKPTHIEKAKVEKKVAPVVDANPAKASNSKTLTIPQGVSLM
QVFRNHNLNIADVNAMTKASGAGNALSNFKAGDKVQISVNSQGRVNELRLENGAKFIRQADGSYIYKK

Sequences:

>Translated_388_residues
MDSEKHTPENQHNPEQSELDLEFSQVEPITPKKMAKPTPSFFDSVKGVFAKKTSHDAALKTTRQAPAFNEATSSSNTQTD
LNADELTSEQPTSEDMGAAVVASAVNWKNPETWPFLQILPQRHRRLFVALFGLILLLIIFFALKPSSQTVQSFEQQNSQA
VPIQFQPLEKGQTVENTILDNLNQPADNSASATQDNTVTSAVTSETQPTSSASGTESTPTAIAPTKVEQPVAPKMGAADA
DKPSAVEKVVNEKVTNEKVVTEKPKTVEKPKAVEKAKVPEKPTHIEKAKVEKKVAPVVDANPAKASNSKTLTIPQGVSLM
QVFRNHNLNIADVNAMTKASGAGNALSNFKAGDKVQISVNSQGRVNELRLENGAKFIRQADGSYIYKK
>Mature_388_residues
MDSEKHTPENQHNPEQSELDLEFSQVEPITPKKMAKPTPSFFDSVKGVFAKKTSHDAALKTTRQAPAFNEATSSSNTQTD
LNADELTSEQPTSEDMGAAVVASAVNWKNPETWPFLQILPQRHRRLFVALFGLILLLIIFFALKPSSQTVQSFEQQNSQA
VPIQFQPLEKGQTVENTILDNLNQPADNSASATQDNTVTSAVTSETQPTSSASGTESTPTAIAPTKVEQPVAPKMGAADA
DKPSAVEKVVNEKVTNEKVVTEKPKTVEKPKAVEKAKVPEKPTHIEKAKVEKKVAPVVDANPAKASNSKTLTIPQGVSLM
QVFRNHNLNIADVNAMTKASGAGNALSNFKAGDKVQISVNSQGRVNELRLENGAKFIRQADGSYIYKK

Specific function: Cell envelope protein involved in phase variation [H]

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 42039; Mature: 42039

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSEKHTPENQHNPEQSELDLEFSQVEPITPKKMAKPTPSFFDSVKGVFAKKTSHDAALK
CCCCCCCCCCCCCCCHHHHCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
TTRQAPAFNEATSSSNTQTDLNADELTSEQPTSEDMGAAVVASAVNWKNPETWPFLQILP
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
QRHRRLFVALFGLILLLIIFFALKPSSQTVQSFEQQNSQAVPIQFQPLEKGQTVENTILD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
NLNQPADNSASATQDNTVTSAVTSETQPTSSASGTESTPTAIAPTKVEQPVAPKMGAADA
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKPSAVEKVVNEKVTNEKVVTEKPKTVEKPKAVEKAKVPEKPTHIEKAKVEKKVAPVVDA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
NPAKASNSKTLTIPQGVSLMQVFRNHNLNIADVNAMTKASGAGNALSNFKAGDKVQISVN
CCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCHHHHCCCCCCHHHHCCCCCEEEEEEC
SQGRVNELRLENGAKFIRQADGSYIYKK
CCCCCHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MDSEKHTPENQHNPEQSELDLEFSQVEPITPKKMAKPTPSFFDSVKGVFAKKTSHDAALK
CCCCCCCCCCCCCCCHHHHCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
TTRQAPAFNEATSSSNTQTDLNADELTSEQPTSEDMGAAVVASAVNWKNPETWPFLQILP
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
QRHRRLFVALFGLILLLIIFFALKPSSQTVQSFEQQNSQAVPIQFQPLEKGQTVENTILD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
NLNQPADNSASATQDNTVTSAVTSETQPTSSASGTESTPTAIAPTKVEQPVAPKMGAADA
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKPSAVEKVVNEKVTNEKVVTEKPKTVEKPKAVEKAKVPEKPTHIEKAKVEKKVAPVVDA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
NPAKASNSKTLTIPQGVSLMQVFRNHNLNIADVNAMTKASGAGNALSNFKAGDKVQISVN
CCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCHHHHCCCCCCHHHHCCCCCEEEEEEC
SQGRVNELRLENGAKFIRQADGSYIYKK
CCCCCHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8559074; 7542800 [H]