| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15601907
Identifier: 15601907
GI number: 15601907
Start: 45038
End: 45592
Strand: Direct
Name: 15601907
Synonym: PM0042
Alternate gene names: NA
Gene position: 45038-45592 (Clockwise)
Preceding gene: 15601900
Following gene: 15601910
Centisome position: 2.0
GC content: 41.08
Gene sequence:
>555_bases ATGTCGGAAGAACGTCAACAGATTTTACAAGCCAAAATTAGTACTGAAATTGTTGATTTCAGGAATGCTTGCCAAACGAT CCAACTTGCTACAGTAAATGAAAAGGGTGAGCCTAATGCCAGTTATGCGCCTTTTGCTTATCATAATGATTGCTATGTCG TTTTGATTTCAGAAATGGCAAGACATGCTCGAAATTTGCAGCAAGTCCCTAAAGTATCTTTAATGCTGATTGAAGATGAG AAAACGGCGAGAGAATTATTTGCGCGTAAGCGTTTGACCACGAATGCAGAGGCGTGCTTGATTGAAAAGGAGAGTGAAGA AGGTAAACAACTTTTAGCGGCATTACGTCAACGTTATGGTGAGCGAATTGATGGTTTAGCCCGCTTATCTGATTTTAAAC TTTTCAGTTTATCTCCGAAGCAAAGTTTATATGTGAAAGGATTTGGTCAGGCGTTTCATGTTGATAAAGATGGAAAAATC CTTCATTTGCGTGGCAGACACGGACACGGACACGGACACGGACACGGACACGGACAGACATCCTCACATCAATAA
Upstream 100 bases:
>100_bases TTTTATGTAACAAATAATTTACATTGACAATCTTGTCATTTTTTACATAATTATGCAAATAAAAATTATTATCATTAAGA TTATTAATTAAGGAGGAACT
Downstream 100 bases:
>100_bases AAAAACACCGCACTTGGGGCCTTTCTTGACGAACAAAGTGCGGTGTTTTTTTGCTATGTTTTTTTATTTTAGCTTAGTAA ACACCTTGCGCTAACATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSEERQQILQAKISTEIVDFRNACQTIQLATVNEKGEPNASYAPFAYHNDCYVVLISEMARHARNLQQVPKVSLMLIEDE KTARELFARKRLTTNAEACLIEKESEEGKQLLAALRQRYGERIDGLARLSDFKLFSLSPKQSLYVKGFGQAFHVDKDGKI LHLRGRHGHGHGHGHGHGQTSSHQ
Sequences:
>Translated_184_residues MSEERQQILQAKISTEIVDFRNACQTIQLATVNEKGEPNASYAPFAYHNDCYVVLISEMARHARNLQQVPKVSLMLIEDE KTARELFARKRLTTNAEACLIEKESEEGKQLLAALRQRYGERIDGLARLSDFKLFSLSPKQSLYVKGFGQAFHVDKDGKI LHLRGRHGHGHGHGHGHGQTSSHQ >Mature_183_residues SEERQQILQAKISTEIVDFRNACQTIQLATVNEKGEPNASYAPFAYHNDCYVVLISEMARHARNLQQVPKVSLMLIEDEK TARELFARKRLTTNAEACLIEKESEEGKQLLAALRQRYGERIDGLARLSDFKLFSLSPKQSLYVKGFGQAFHVDKDGKIL HLRGRHGHGHGHGHGHGQTSSHQ
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 20776; Mature: 20645
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERQQILQAKISTEIVDFRNACQTIQLATVNEKGEPNASYAPFAYHNDCYVVLISEMA CCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEECCCEEEEEHHHHH RHARNLQQVPKVSLMLIEDEKTARELFARKRLTTNAEACLIEKESEEGKQLLAALRQRYG HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH ERIDGLARLSDFKLFSLSPKQSLYVKGFGQAFHVDKDGKILHLRGRHGHGHGHGHGHGQT HHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC SSHQ CCCC >Mature Secondary Structure SEERQQILQAKISTEIVDFRNACQTIQLATVNEKGEPNASYAPFAYHNDCYVVLISEMA CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEECCCEEEEEHHHHH RHARNLQQVPKVSLMLIEDEKTARELFARKRLTTNAEACLIEKESEEGKQLLAALRQRYG HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH ERIDGLARLSDFKLFSLSPKQSLYVKGFGQAFHVDKDGKILHLRGRHGHGHGHGHGHGQT HHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC SSHQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]