Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is yufP [H]
Identifier: 15595023
GI number: 15595023
Start: 716620
End: 717771
Strand: Direct
Name: yufP [H]
Synonym: BB0678
Alternate gene names: 15595023
Gene position: 716620-717771 (Clockwise)
Preceding gene: 15595022
Following gene: 15595024
Centisome position: 78.69
GC content: 28.3
Gene sequence:
>1152_bases ATGACAATTAGTAAAAACGTATTTAGTAAATTTATTTTGAAATTTTTAAATTCTTCAGCATTTGTTAGTGTATTTGCTCT ATTTGTTGGATTTTTAATTGTTGGGCTAGTGGTGATGGGGCTTGGTCATTCTCCTTTTAGAATGTATTTTATAATATTAG AAATTATTTTTTCTTCTCCCAAACATTTAGGTTATGTTTTAAGTTATTCAGCTCCTTTGATTTTTACAGGTCTTTCTATT GGTATTTCTTTAAAAGCGGGTCTTTTTAATATTGGGGTTGAAGGCCAGTTTATACTAGGATCTATTGTTGCTTTAATAGC ATCAGTTTTACTTGATTTGCCTCCAATTTTACATGTAATTACTATTTTTATTATTACTTTTTTAGCTTCAGGCAGTTTAG GAATTTTAATCGGATATTTAAAAGCCAAATTCAATATTAGCGAAGTGATTTCAGGAATAATGTTTAATTGGATATTATTT CATTTAAATAATATAATTTTAGATTTTAGTTTTATTAAAAGAGATAATAGTGATTTTTCAAAACCCATTAAAGAAAGCGC ATATATTGATTTTTTAGCTTCTTGGAAGCTCTCACCAGAAGGTCTTGCTTATAGATCTTCTCATCCTTTTGTTAATGAGC TTTTAAAAGCACCTCTTCATTTTGGAATAATTTTAGGTATAATTTTTGCTATTTTAATATGGTTTTTACTTAATAAAACT ATTATTGGATTTAAAATAAATGCCACAGGAAGTAATATTGAAGCTTCAAGATGTATGGGTATTAATGTAAAAGCTGTGCT AATTTTTTCAATGTTTCTCTCAGCAGCTGTTGCAGGTCTTGCTGGTGCTATTCAACTTATGGGTGTTAATAAAGCTATAT TTAAGCTTTCTTATATGCAAGGAATTGGTTTTAATGGGATAGCTGCTTCTCTTATGGGAAACAATTCGCCAATTGGCATA ATATTTTCTAGCATTCTTTTTTCTATATTGCTTTATGGAAGCAGTAGAGTTCAAAGTTTAATGGGCCTTCCATCTTCAAT TGTATCTTTGATGATGGGAATAATTGTTCTTGTAATTTCTGCTAGCTATTTTTTAAATAAAATTGTTTTAAAAGGTGTTA AGCGTGTCAAATATAATAATATTCTTGATTAG
Upstream 100 bases:
>100_bases TGACAGGATAGCTGTAATGCATGGTGGAAGAATAGTGGGCATTTTAGAGGATAATTTTGATATTGATGTTATTGGTAAAA TGATGATAGGCTTAAGCTAA
Downstream 100 bases:
>100_bases TGAAACTTTAATAAATTCTCAAACCTTAATTTTAGCTGGTCTTGGGGGTCTTATAAGCGAGAAAAGTGGAATTATTAATA TTGGACTTGAAGGAATAATG
Product: sugar ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTISKNVFSKFILKFLNSSAFVSVFALFVGFLIVGLVVMGLGHSPFRMYFIILEIIFSSPKHLGYVLSYSAPLIFTGLSI GISLKAGLFNIGVEGQFILGSIVALIASVLLDLPPILHVITIFIITFLASGSLGILIGYLKAKFNISEVISGIMFNWILF HLNNIILDFSFIKRDNSDFSKPIKESAYIDFLASWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT IIGFKINATGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQLMGVNKAIFKLSYMQGIGFNGIAASLMGNNSPIGI IFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIVLKGVKRVKYNNILD
Sequences:
>Translated_383_residues MTISKNVFSKFILKFLNSSAFVSVFALFVGFLIVGLVVMGLGHSPFRMYFIILEIIFSSPKHLGYVLSYSAPLIFTGLSI GISLKAGLFNIGVEGQFILGSIVALIASVLLDLPPILHVITIFIITFLASGSLGILIGYLKAKFNISEVISGIMFNWILF HLNNIILDFSFIKRDNSDFSKPIKESAYIDFLASWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT IIGFKINATGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQLMGVNKAIFKLSYMQGIGFNGIAASLMGNNSPIGI IFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIVLKGVKRVKYNNILD >Mature_382_residues TISKNVFSKFILKFLNSSAFVSVFALFVGFLIVGLVVMGLGHSPFRMYFIILEIIFSSPKHLGYVLSYSAPLIFTGLSIG ISLKAGLFNIGVEGQFILGSIVALIASVLLDLPPILHVITIFIITFLASGSLGILIGYLKAKFNISEVISGIMFNWILFH LNNIILDFSFIKRDNSDFSKPIKESAYIDFLASWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKTI IGFKINATGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQLMGVNKAIFKLSYMQGIGFNGIAASLMGNNSPIGII FSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIVLKGVKRVKYNNILD
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 41710; Mature: 41579
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISKNVFSKFILKFLNSSAFVSVFALFVGFLIVGLVVMGLGHSPFRMYFIILEIIFSSP CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC KHLGYVLSYSAPLIFTGLSIGISLKAGLFNIGVEGQFILGSIVALIASVLLDLPPILHVI HHHCCHHCCCCCHHEEHHHHCEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHH TIFIITFLASGSLGILIGYLKAKFNISEVISGIMFNWILFHLNNIILDFSFIKRDNSDFS HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KPIKESAYIDFLASWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IIGFKINATGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQLMGVNKAIFKLSYMQ EEEEEEECCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GIGFNGIAASLMGNNSPIGIIFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVIS CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH ASYFLNKIVLKGVKRVKYNNILD HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TISKNVFSKFILKFLNSSAFVSVFALFVGFLIVGLVVMGLGHSPFRMYFIILEIIFSSP CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC KHLGYVLSYSAPLIFTGLSIGISLKAGLFNIGVEGQFILGSIVALIASVLLDLPPILHVI HHHCCHHCCCCCHHEEHHHHCEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHH TIFIITFLASGSLGILIGYLKAKFNISEVISGIMFNWILFHLNNIILDFSFIKRDNSDFS HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KPIKESAYIDFLASWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IIGFKINATGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQLMGVNKAIFKLSYMQ EEEEEEECCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GIGFNGIAASLMGNNSPIGIIFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVIS CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH ASYFLNKIVLKGVKRVKYNNILD HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]