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The map label for this gene is rsmH [H]

Identifier: 15594651

GI number: 15594651

Start: 314424

End: 315314

Strand: Reverse

Name: rsmH [H]

Synonym: BB0306

Alternate gene names: 15594651

Gene position: 315314-314424 (Counterclockwise)

Preceding gene: 15594652

Following gene: 15594650

Centisome position: 34.62

GC content: 29.29

Gene sequence:

>891_bases
ATGAATAATAATGCTTTTCATTTTCCAGTACTTCTTGATGCAATTTGTAAGCTTATAGAAGATTTGCCCGTAAAAAGTGA
CTTAATATACATTGATTCTACTCTTGGAGAAGGTGTTCATGCAAAGGCTATTCTTGAGAAATATGACTTTTTAAGTTTGG
TTGGAATTGAAAGAGATCCTCAAATTTTAGAAAGAGCAAGGCAGTTTCTTTCTATTTTTGAAGAGAGAATTACATATTTT
AATGATTGGTTTGATAATTTTTTCGTCAATTATCCTTTAAATGTCAAAGCCAATTTTATTTTAGTTGATCTTGGTATTTC
TATGTTTCATTACAAGGGTAGTAAAAAAGGATTTTCTTTTCTTGAAGATGAGCCTTTAGATATGAGGCTTTGTTCTTCTT
CTTGCAAAATTAGTGCGGCTGAGATTGTAAACACTTATAGTAAATATGACCTTGAAGCTTTAATTTATGATTTAAGTAAT
GAACATTATTCTAGAAGAATTTCTAAGGCTATTGTAGAATATAGAAAAATTAAAAAAATAGAAACCACAAAAGAGTTGCA
ATCCATAATAAGCAAAGTTTATCCTTTTTCAAAAGTTAAAATAAATCCAGCTACAAAAACTTTTCAAGCGTTAAGAATTT
ATGTAAATGATGAGCTTGCTCGGCTTAAAAGGAGCTTGCCTTTTTGGGTAGAAAATTTAGCTAAAGATGGAATTTTAGCT
ATTATTACGTTTCATTCAATAGAGGACCGTATTGTAAAAGATTTTTTTAGAAGCTTGAGCTGTGATTTGTATGCTAAGAT
CTCAAAAAAGCCCATTATGCCAAGTTTTGATGAGATTAAAAAAAACAAACCTTCAAGGAGTGCAAAACTTAGAGTTGTAA
AAAAATTATGA

Upstream 100 bases:

>100_bases
ATAAATGATCTTAATTTTGTTAAGGGTAAGAATGAGCTTAAAATAAAATATGGCGATGTTTATGGAAATGAAAAAAAAAT
AATTTATAGGTTTAAATTAA

Downstream 100 bases:

>100_bases
ACAGCATAAGTAAGATTGAATTTAAAGTTTATTGTATTTTAGTTTTGATACTAACAGTTATATTGTGTTTTAATATTTAT
TTAAATTTCAGATATGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAILEKYDFLSLVGIERDPQILERARQFLSIFEERITYF
NDWFDNFFVNYPLNVKANFILVDLGISMFHYKGSKKGFSFLEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSN
EHYSRRISKAIVEYRKIKKIETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDELARLKRSLPFWVENLAKDGILA
IITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSFDEIKKNKPSRSAKLRVVKKL

Sequences:

>Translated_296_residues
MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAILEKYDFLSLVGIERDPQILERARQFLSIFEERITYF
NDWFDNFFVNYPLNVKANFILVDLGISMFHYKGSKKGFSFLEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSN
EHYSRRISKAIVEYRKIKKIETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDELARLKRSLPFWVENLAKDGILA
IITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSFDEIKKNKPSRSAKLRVVKKL
>Mature_296_residues
MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAILEKYDFLSLVGIERDPQILERARQFLSIFEERITYF
NDWFDNFFVNYPLNVKANFILVDLGISMFHYKGSKKGFSFLEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSN
EHYSRRISKAIVEYRKIKKIETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDELARLKRSLPFWVENLAKDGILA
IITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSFDEIKKNKPSRSAKLRVVKKL

Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]

COG id: COG0275

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]

Homologues:

Organism=Homo sapiens, GI165377209, Length=343, Percent_Identity=30.0291545189504, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI165377202, Length=196, Percent_Identity=29.5918367346939, Blast_Score=89, Evalue=4e-18,
Organism=Escherichia coli, GI1786270, Length=317, Percent_Identity=33.1230283911672, Blast_Score=165, Evalue=3e-42,
Organism=Drosophila melanogaster, GI62472493, Length=335, Percent_Identity=30.1492537313433, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI28571637, Length=335, Percent_Identity=30.1492537313433, Blast_Score=135, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002903 [H]

Pfam domain/function: PF01795 Methyltransf_5 [H]

EC number: NA

Molecular weight: Translated: 34382; Mature: 34382

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAILEKYDFLSLVGIERDP
CCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCH
QILERARQFLSIFEERITYFNDWFDNFFVNYPLNVKANFILVDLGISMFHYKGSKKGFSF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECHHHHEECCCCCCCCC
LEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSNEHYSRRISKAIVEYRKIKKI
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDELARLKRSLPFWVENLAKDGILA
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEE
IITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSFDEIKKNKPSRSAKLRVVKKL
EEEEHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAILEKYDFLSLVGIERDP
CCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCH
QILERARQFLSIFEERITYFNDWFDNFFVNYPLNVKANFILVDLGISMFHYKGSKKGFSF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECHHHHEECCCCCCCCC
LEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSNEHYSRRISKAIVEYRKIKKI
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDELARLKRSLPFWVENLAKDGILA
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEE
IITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSFDEIKKNKPSRSAKLRVVKKL
EEEEHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA