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The map label for this gene is yizA [H]

Identifier: 154684670

GI number: 154684670

Start: 156360

End: 156833

Strand: Reverse

Name: yizA [H]

Synonym: RBAM_001770

Alternate gene names: 154684670

Gene position: 156833-156360 (Counterclockwise)

Preceding gene: 154684674

Following gene: 154684556

Centisome position: 4.0

GC content: 46.84

Gene sequence:

>474_bases
ATGAAAAAGCTGTTTCAATACAATTGGACGGTGCGTGACGAGTGGTTTATGATATGTGAAAAGCTGAGCCGGGAGGAACT
GACGAAAACCCGGACGGGCGGAATGGAGAGCATCTTGCGGACTTTATTTCATATCATTGATGTAGAGATCAGCTGGGCTC
GTGCCATTTTAGGTAAAGATGATGTTTTACCTGCTCAGTCTGACTATACGAGCATTCAGGATCTCAGAAAGCTGTCTGAA
CAGTATCGGGAGGATGTCATTCATACGGTCTCCCTCAAAGGACCGGATCTTGTTAAGCCGGACTGGATGGACCAAACCTT
TCCTAAAGAAGATATTCTCCGCCACATCCTTGCGCATGAGATTCACCATATGGGACAACTGTCTGTTTGGGCCAGAGACA
TTGGAATAGAAACGGTTTCGGCTAATGTGATCAGCCGTCCGCAGGAAAAAGCCGCAAAAAAACAGCACCTCTGA

Upstream 100 bases:

>100_bases
TGAAAGGAAAAGGGAAAAAGCATGCTTTGTTGATAGTGGAAATCCTCCCAAATGAAGGAGTTATATGTTAACTGGAAGAA
TAAAGAGCTGAGGTGACGTG

Downstream 100 bases:

>100_bases
CGGGATGCCGTTTTTATATTTTAATGCTTCTTGTTACGGAGTATGTATTAATGTATTCATCCAGCACGAGGCCGCCTTTG
TCCTCGTAAAAACCGGCAAC

Product: YizA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKKLFQYNWTVRDEWFMICEKLSREELTKTRTGGMESILRTLFHIIDVEISWARAILGKDDVLPAQSDYTSIQDLRKLSE
QYREDVIHTVSLKGPDLVKPDWMDQTFPKEDILRHILAHEIHHMGQLSVWARDIGIETVSANVISRPQEKAAKKQHL

Sequences:

>Translated_157_residues
MKKLFQYNWTVRDEWFMICEKLSREELTKTRTGGMESILRTLFHIIDVEISWARAILGKDDVLPAQSDYTSIQDLRKLSE
QYREDVIHTVSLKGPDLVKPDWMDQTFPKEDILRHILAHEIHHMGQLSVWARDIGIETVSANVISRPQEKAAKKQHL
>Mature_157_residues
MKKLFQYNWTVRDEWFMICEKLSREELTKTRTGGMESILRTLFHIIDVEISWARAILGKDDVLPAQSDYTSIQDLRKLSE
QYREDVIHTVSLKGPDLVKPDWMDQTFPKEDILRHILAHEIHHMGQLSVWARDIGIETVSANVISRPQEKAAKKQHL

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 18381; Mature: 18381

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFQYNWTVRDEWFMICEKLSREELTKTRTGGMESILRTLFHIIDVEISWARAILGKD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DVLPAQSDYTSIQDLRKLSEQYREDVIHTVSLKGPDLVKPDWMDQTFPKEDILRHILAHE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IHHMGQLSVWARDIGIETVSANVISRPQEKAAKKQHL
HHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MKKLFQYNWTVRDEWFMICEKLSREELTKTRTGGMESILRTLFHIIDVEISWARAILGKD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DVLPAQSDYTSIQDLRKLSEQYREDVIHTVSLKGPDLVKPDWMDQTFPKEDILRHILAHE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IHHMGQLSVWARDIGIETVSANVISRPQEKAAKKQHL
HHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]