Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is crcB2 [H]
Identifier: 154248686
GI number: 154248686
Start: 5294129
End: 5294524
Strand: Reverse
Name: crcB2 [H]
Synonym: Xaut_4768
Alternate gene names: 154248686
Gene position: 5294524-5294129 (Counterclockwise)
Preceding gene: 154248687
Following gene: 154248685
Centisome position: 99.73
GC content: 62.37
Gene sequence:
>396_bases ATGACCTTCACCCTTCCTCCCGCTCTTGTCGTCTTCCTCGGTGCCGGCCTGGGTGGTGTCGTGCGCCACCTCGTCAACAT GACGGTGCCCAAGCTGCTGGGTACCGGATTTCCCTTCGCCACCTTCCTCATCAATGTGTCCGGCAGCTTCCTCATGGGGT TGATGGTCGGATATCTGGCGTTCAAGGACGGCGAGTTCTGGAACCAGACCATGCGGCTGTTCCTGACCACCGGCATCCTC GGCGGCTACACCACCTTCTCCACCTTCTCGCTGGATTTCTTCCTGCTCATGGAGCGCGGCGCCTACAGTTCCGCCTTCGC CTATGCGGTCGGCTCGGTGGCGCTCGCCTTCATCGCCGTGTTCGTCGGCATCGCCGTCATGCGCGCGCTGACGTGA
Upstream 100 bases:
>100_bases CTACCTTGTGGTCTATCGCGTCGGAGACGATGAAGTCACCATCCTCGCCGTGCTCCATGCCGTGCGGCACATTCGTTCCT GACCCTCGCCCGGACTGGCC
Downstream 100 bases:
>100_bases CGGACGGCGCCGGTTGCTCTATTGCTGCCGTTCCGGTTCCAGGCGCTGTTTAAAGGACATTTTGATCCATGGCCGTCGCG ATGAAGACCGTGGCCGAGGA
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTFTLPPALVVFLGAGLGGVVRHLVNMTVPKLLGTGFPFATFLINVSGSFLMGLMVGYLAFKDGEFWNQTMRLFLTTGIL GGYTTFSTFSLDFFLLMERGAYSSAFAYAVGSVALAFIAVFVGIAVMRALT
Sequences:
>Translated_131_residues MTFTLPPALVVFLGAGLGGVVRHLVNMTVPKLLGTGFPFATFLINVSGSFLMGLMVGYLAFKDGEFWNQTMRLFLTTGIL GGYTTFSTFSLDFFLLMERGAYSSAFAYAVGSVALAFIAVFVGIAVMRALT >Mature_130_residues TFTLPPALVVFLGAGLGGVVRHLVNMTVPKLLGTGFPFATFLINVSGSFLMGLMVGYLAFKDGEFWNQTMRLFLTTGILG GYTTFSTFSLDFFLLMERGAYSSAFAYAVGSVALAFIAVFVGIAVMRALT
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14047; Mature: 13916
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTLPPALVVFLGAGLGGVVRHLVNMTVPKLLGTGFPFATFLINVSGSFLMGLMVGYLA CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH FKDGEFWNQTMRLFLTTGILGGYTTFSTFSLDFFLLMERGAYSSAFAYAVGSVALAFIAV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVGIAVMRALT HHHHHHHHHCC >Mature Secondary Structure TFTLPPALVVFLGAGLGGVVRHLVNMTVPKLLGTGFPFATFLINVSGSFLMGLMVGYLA CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH FKDGEFWNQTMRLFLTTGILGGYTTFSTFSLDFFLLMERGAYSSAFAYAVGSVALAFIAV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVGIAVMRALT HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA