Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ygaY [H]
Identifier: 154248676
GI number: 154248676
Start: 5283504
End: 5284757
Strand: Reverse
Name: ygaY [H]
Synonym: Xaut_4758
Alternate gene names: 154248676
Gene position: 5284757-5283504 (Counterclockwise)
Preceding gene: 154248678
Following gene: 154248674
Centisome position: 99.54
GC content: 70.73
Gene sequence:
>1254_bases ATGTGGGACGTGCCATGCGCGCGGGACACGTCTTGCGACTTGACCGCCGGGGCACCCCGCCGCAGGGATGACCCTCCTCA TCCGGCGGATCTGATGCCCTTTCTTCTCGTCCTCGGCCTCGCGGCCTTCGCGAGCGCATTTTCCATGCGCGCCGTCGATC CGATGCTCAACATCCTCGCCGCCGACCTGAAGGTGACGCTGCAGGAGGTGGCGCTGCTCGCCAGCGCCTTCACCCTGCCT TACGCCACCATGCAGCTCTTGTTCGGCCCCATCGGCGATGCGGTGGGCAAGGTGCGGCTGATCCGCTTCAACCTCGCCAT GCTGGCGGTGGGGCTCGCGGTCTCGGCGCTGGTTCCCGGCCACCGGGAGCTGCTGGCCGCCCGGGTGGTGTCGGGGGCGT TCGCGGGGGGCATCATCCCCGTGGTGCTGGCAACCGTAGGCGATCGTGTGCCGTACGATCAGAGGCCGGTGGCGCTCAGC CGGGTGCTGCTGGCCCTGGTGCTGGGCCAGCTGGTGGGTTCGGCGGCGGCGGGCTTCATCGCCGAATATGCCGGCTGGCG GCCGGTGTTCTGGTGCGCGTTCGCGGTGGCGGCGAGCGCGGCCCTGGCCGCCCTGGTCGGCATCAGCGAAGAGAGGGCGC GCCAGCCCCTGTCGTTCCGCGCGGCCCTCGCCCGCTACGGCACGGTGCTGAAAAACCCCTTGTCGCTGAAGGTGTATGCG GTGGTGGCGGTGGAAGGGGCGCTCACCTTCGGGGTGTTCCCGCTGGCGGCGCCGCTGATGGTGGAGCACGGCCTCGGCGA TGCGGTGGAGGCCGGCCTGATGCTGGGCGCCTTCGCCATCGGCGGCGCCTTCTATACCTTCGCCGTGCCGGTCCTGGTGC GCCACCTGGGCCTTGCCGGCATGGTGGGGGTGGGCGCGGCCAGCGTGGGCGTGCTGCTCATGGGGGCGGCTGTCGGGCCG AGCCTTGCGGTGGTGATTGCTGTATTCGCCGCCGCGGGCTTTGCCTTCTACATGATCCACAACGTGTTGCAGATCCTTGC CACCGAGCTGTCGGCGGAGGCGCGGGGATCGGCGGTGTCGCTGTTCGCCTCCGCCTTCTTCGTGGGGCAGGCCGTGGGGG CCATCGTCCTGGCCCATGCGGCGGGACTTTTGGGAGCAGCGCCCGTGTTCGCGGTGGCGGGGCTGGGCATGCTGATCCTC GCCGTGCCCGCCAGCCTGCTGCCGCCGCGCAAGGCCAAGGTGACGACCGGCTGA
Upstream 100 bases:
>100_bases TCAATGTTTTCCGGCCTGATTCACGGATCAGTTGGAAATCACGCCCGCGAAACGCTCGATTGAACATCCATACCGCCAGC GGCATGCGCTGTCGGAATGC
Downstream 100 bases:
>100_bases GGGGGCGTCTTCAATTGGCTTCGCTCAAGCGCCGCGCGGGCTTGACCCATAGCCCTTGAGGCAAGCTCAAAGGCTATGGG GGTCAGATGTCGAGCAAGGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MWDVPCARDTSCDLTAGAPRRRDDPPHPADLMPFLLVLGLAAFASAFSMRAVDPMLNILAADLKVTLQEVALLASAFTLP YATMQLLFGPIGDAVGKVRLIRFNLAMLAVGLAVSALVPGHRELLAARVVSGAFAGGIIPVVLATVGDRVPYDQRPVALS RVLLALVLGQLVGSAAAGFIAEYAGWRPVFWCAFAVAASAALAALVGISEERARQPLSFRAALARYGTVLKNPLSLKVYA VVAVEGALTFGVFPLAAPLMVEHGLGDAVEAGLMLGAFAIGGAFYTFAVPVLVRHLGLAGMVGVGAASVGVLLMGAAVGP SLAVVIAVFAAAGFAFYMIHNVLQILATELSAEARGSAVSLFASAFFVGQAVGAIVLAHAAGLLGAAPVFAVAGLGMLIL AVPASLLPPRKAKVTTG
Sequences:
>Translated_417_residues MWDVPCARDTSCDLTAGAPRRRDDPPHPADLMPFLLVLGLAAFASAFSMRAVDPMLNILAADLKVTLQEVALLASAFTLP YATMQLLFGPIGDAVGKVRLIRFNLAMLAVGLAVSALVPGHRELLAARVVSGAFAGGIIPVVLATVGDRVPYDQRPVALS RVLLALVLGQLVGSAAAGFIAEYAGWRPVFWCAFAVAASAALAALVGISEERARQPLSFRAALARYGTVLKNPLSLKVYA VVAVEGALTFGVFPLAAPLMVEHGLGDAVEAGLMLGAFAIGGAFYTFAVPVLVRHLGLAGMVGVGAASVGVLLMGAAVGP SLAVVIAVFAAAGFAFYMIHNVLQILATELSAEARGSAVSLFASAFFVGQAVGAIVLAHAAGLLGAAPVFAVAGLGMLIL AVPASLLPPRKAKVTTG >Mature_417_residues MWDVPCARDTSCDLTAGAPRRRDDPPHPADLMPFLLVLGLAAFASAFSMRAVDPMLNILAADLKVTLQEVALLASAFTLP YATMQLLFGPIGDAVGKVRLIRFNLAMLAVGLAVSALVPGHRELLAARVVSGAFAGGIIPVVLATVGDRVPYDQRPVALS RVLLALVLGQLVGSAAAGFIAEYAGWRPVFWCAFAVAASAALAALVGISEERARQPLSFRAALARYGTVLKNPLSLKVYA VVAVEGALTFGVFPLAAPLMVEHGLGDAVEAGLMLGAFAIGGAFYTFAVPVLVRHLGLAGMVGVGAASVGVLLMGAAVGP SLAVVIAVFAAAGFAFYMIHNVLQILATELSAEARGSAVSLFASAFFVGQAVGAIVLAHAAGLLGAAPVFAVAGLGMLIL AVPASLLPPRKAKVTTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42554; Mature: 42554
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDVPCARDTSCDLTAGAPRRRDDPPHPADLMPFLLVLGLAAFASAFSMRAVDPMLNILA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADLKVTLQEVALLASAFTLPYATMQLLFGPIGDAVGKVRLIRFNLAMLAVGLAVSALVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCC HRELLAARVVSGAFAGGIIPVVLATVGDRVPYDQRPVALSRVLLALVLGQLVGSAAAGFI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEYAGWRPVFWCAFAVAASAALAALVGISEERARQPLSFRAALARYGTVLKNPLSLKVYA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEE VVAVEGALTFGVFPLAAPLMVEHGLGDAVEAGLMLGAFAIGGAFYTFAVPVLVRHLGLAG EEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVGVGAASVGVLLMGAAVGPSLAVVIAVFAAAGFAFYMIHNVLQILATELSAEARGSAVS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LFASAFFVGQAVGAIVLAHAAGLLGAAPVFAVAGLGMLILAVPASLLPPRKAKVTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWDVPCARDTSCDLTAGAPRRRDDPPHPADLMPFLLVLGLAAFASAFSMRAVDPMLNILA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADLKVTLQEVALLASAFTLPYATMQLLFGPIGDAVGKVRLIRFNLAMLAVGLAVSALVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCC HRELLAARVVSGAFAGGIIPVVLATVGDRVPYDQRPVALSRVLLALVLGQLVGSAAAGFI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEYAGWRPVFWCAFAVAASAALAALVGISEERARQPLSFRAALARYGTVLKNPLSLKVYA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEE VVAVEGALTFGVFPLAAPLMVEHGLGDAVEAGLMLGAFAIGGAFYTFAVPVLVRHLGLAG EEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVGVGAASVGVLLMGAAVGPSLAVVIAVFAAAGFAFYMIHNVLQILATELSAEARGSAVS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LFASAFFVGQAVGAIVLAHAAGLLGAAPVFAVAGLGMLILAVPASLLPPRKAKVTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]