Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 154248672

GI number: 154248672

Start: 5277271

End: 5278179

Strand: Reverse

Name: soj [H]

Synonym: Xaut_4754

Alternate gene names: 154248672

Gene position: 5278179-5277271 (Counterclockwise)

Preceding gene: 154248673

Following gene: 154248671

Centisome position: 99.42

GC content: 64.91

Gene sequence:

>909_bases
ATGGCGAATGCTGACGGGCGAGTGATCGCCGTTGCCAACATGAAGGGGGGCGTCGGCAAGACCACCACGGTGGTCATGCT
GGCGGAAGGGCTGGCCGAGGCCGGGCACAGGGTGGTGGTGCTCGACCTCGACGCCCAGGCCAACGCCTCCTATTGCTTCG
CCCCGGACGACCAGCTGAAGGCAATCCTGGAACAGCGCCGGTCGGTGACATCCTTCCTCGCCGATCGCCTGCTCTATGGC
GATCGCACCCCCATCACCGACTATCTGGCGCGCGACATCTCCCACGTCATGAAGGCTGGCGAGCCGTTGGCCATCGACAT
GGTGGTGGCCAGCCCCCGCCTGCGCCTTCTGGAGCGGGAGATCGTGCTGCGCCTCACCGAGAAGAATTACGGCATCCGCT
CGCTGGAGGGCCAGTCGCTGAAGGTGCTTGAGGAGGCGCTGGTCCTGCTCAAGGCGCGCTACGATTATGTGCTGTTCGAT
TGCGCGCCCGGCATCTCCGCCTTCACCGAGGTGGCCATCCGCCTCGCCGACATGGTGGTCGTGCCCACCATCCCCGATTA
TCTTTCCACCCTCGGCTTTGATGCCTTCCGTGCCTCGGTGTGGGAGAATGCGCACGTCACCCGCTCCGCGCTGCCGCAGC
CCAAGAGGCGGCCGGTGGTGCTGGCCAGCCGGGTGAACGGCAACAAGATCCAGCATCGCGAGACCCTCGCCAGCCTGCGC
AACGAAGCGGAAGAGCCCGACGCGGTGTTCGAGATGTTCGATCTGGAGGTGGACAACCAAGCCTCCATCGAACGGGCCAT
GGATCCGGAAAACTTTCCCTATGCGCCCACATTCGAGCAGAAATGGAACCGGGCGCTGGGTCAGGTGCGCGACCTCGTGA
CCGAGACACGGAGACGGCTCGATGGGTGA

Upstream 100 bases:

>100_bases
GCTTCTACTATCTGACCGGATTGTATTGATCTGGTTGTATTGAGCGGGCACCTCTCCCCCGTTATGTTGCGTCGCACAAA
CGGGCGGGGATGGGGCACCG

Downstream 100 bases:

>100_bases
GGAAACCGATTTTTTCCGGCTGCTCGGGGCCATCGGCGGCAAGGCTGCGCTGTTTCCCGCCGCCGGAAATGCCGCGCGCA
AGGCGGTGAACGAAATCGTG

Product: cobyrinic acid ac-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYG
DRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFD
CAPGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR
NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG

Sequences:

>Translated_302_residues
MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYG
DRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFD
CAPGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR
NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG
>Mature_301_residues
ANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYGD
RTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDC
APGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLRN
EAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 33656; Mature: 33525

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLK
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHH
AILEQRRSVTSFLADRLLYGDRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLERE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
IVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDCAPGISAFTEVAIRLADMVV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHEEE
VPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR
ECCCHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRL
HCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DG
CC
>Mature Secondary Structure 
ANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLK
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHH
AILEQRRSVTSFLADRLLYGDRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLERE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
IVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDCAPGISAFTEVAIRLADMVV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHEEE
VPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR
ECCCHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRL
HCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]