Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is soj [H]
Identifier: 154248672
GI number: 154248672
Start: 5277271
End: 5278179
Strand: Reverse
Name: soj [H]
Synonym: Xaut_4754
Alternate gene names: 154248672
Gene position: 5278179-5277271 (Counterclockwise)
Preceding gene: 154248673
Following gene: 154248671
Centisome position: 99.42
GC content: 64.91
Gene sequence:
>909_bases ATGGCGAATGCTGACGGGCGAGTGATCGCCGTTGCCAACATGAAGGGGGGCGTCGGCAAGACCACCACGGTGGTCATGCT GGCGGAAGGGCTGGCCGAGGCCGGGCACAGGGTGGTGGTGCTCGACCTCGACGCCCAGGCCAACGCCTCCTATTGCTTCG CCCCGGACGACCAGCTGAAGGCAATCCTGGAACAGCGCCGGTCGGTGACATCCTTCCTCGCCGATCGCCTGCTCTATGGC GATCGCACCCCCATCACCGACTATCTGGCGCGCGACATCTCCCACGTCATGAAGGCTGGCGAGCCGTTGGCCATCGACAT GGTGGTGGCCAGCCCCCGCCTGCGCCTTCTGGAGCGGGAGATCGTGCTGCGCCTCACCGAGAAGAATTACGGCATCCGCT CGCTGGAGGGCCAGTCGCTGAAGGTGCTTGAGGAGGCGCTGGTCCTGCTCAAGGCGCGCTACGATTATGTGCTGTTCGAT TGCGCGCCCGGCATCTCCGCCTTCACCGAGGTGGCCATCCGCCTCGCCGACATGGTGGTCGTGCCCACCATCCCCGATTA TCTTTCCACCCTCGGCTTTGATGCCTTCCGTGCCTCGGTGTGGGAGAATGCGCACGTCACCCGCTCCGCGCTGCCGCAGC CCAAGAGGCGGCCGGTGGTGCTGGCCAGCCGGGTGAACGGCAACAAGATCCAGCATCGCGAGACCCTCGCCAGCCTGCGC AACGAAGCGGAAGAGCCCGACGCGGTGTTCGAGATGTTCGATCTGGAGGTGGACAACCAAGCCTCCATCGAACGGGCCAT GGATCCGGAAAACTTTCCCTATGCGCCCACATTCGAGCAGAAATGGAACCGGGCGCTGGGTCAGGTGCGCGACCTCGTGA CCGAGACACGGAGACGGCTCGATGGGTGA
Upstream 100 bases:
>100_bases GCTTCTACTATCTGACCGGATTGTATTGATCTGGTTGTATTGAGCGGGCACCTCTCCCCCGTTATGTTGCGTCGCACAAA CGGGCGGGGATGGGGCACCG
Downstream 100 bases:
>100_bases GGAAACCGATTTTTTCCGGCTGCTCGGGGCCATCGGCGGCAAGGCTGCGCTGTTTCCCGCCGCCGGAAATGCCGCGCGCA AGGCGGTGAACGAAATCGTG
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYG DRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFD CAPGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG
Sequences:
>Translated_302_residues MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYG DRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFD CAPGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG >Mature_301_residues ANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLKAILEQRRSVTSFLADRLLYGD RTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLEREIVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDC APGISAFTEVAIRLADMVVVPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLRN EAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRLDG
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 33656; Mature: 33525
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLK CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHH AILEQRRSVTSFLADRLLYGDRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLERE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH IVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDCAPGISAFTEVAIRLADMVV HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHEEE VPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR ECCCHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRL HCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DG CC >Mature Secondary Structure ANADGRVIAVANMKGGVGKTTTVVMLAEGLAEAGHRVVVLDLDAQANASYCFAPDDQLK CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHH AILEQRRSVTSFLADRLLYGDRTPITDYLARDISHVMKAGEPLAIDMVVASPRLRLLERE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH IVLRLTEKNYGIRSLEGQSLKVLEEALVLLKARYDYVLFDCAPGISAFTEVAIRLADMVV HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHEEE VPTIPDYLSTLGFDAFRASVWENAHVTRSALPQPKRRPVVLASRVNGNKIQHRETLASLR ECCCHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH NEAEEPDAVFEMFDLEVDNQASIERAMDPENFPYAPTFEQKWNRALGQVRDLVTETRRRL HCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]