Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 154248604
GI number: 154248604
Start: 5190487
End: 5192148
Strand: Reverse
Name: mviN [H]
Synonym: Xaut_4685
Alternate gene names: 154248604
Gene position: 5192148-5190487 (Counterclockwise)
Preceding gene: 154248606
Following gene: 154248602
Centisome position: 97.8
GC content: 68.11
Gene sequence:
>1662_bases ATGTCGCCCAACGGGTCGAACAAGGAACCTGGGCAGGAACCGAGCAGGCGTTCGAGCCAGGCCCGAACCATCGGTATCGC CTCGGCGATCTGGGGCGTCTCGATCTTCCTCAGCCGCATCCTTGGGCTGGTGCGCGAGCAGATCATCGGCCGCACCCTGG GAGCGAGCCGGCAGGCGGACCTCTACTTCGCTTCCTTCACCCTGCCGGATTTCCTGAACTACCTGTTGGCTGCCGGCGCG CTGTCCATCGTCTTCATCCCCATCTTCGTCAAATATCTGGAAGCGGGGGACACGAGGCGCGGCTGGGAAGCCTTCAGCGT CATCGCCAATTTCATCGTCGTGGTGGGCTCGCTGGCCATCGCGCTGATGATGATCTTCGCCCGGCCGCTCGCCACCCTCG TGGCGCCGGGCTTCACCGACGCGGCGGAGGTGGACGAACTGGTGCGCCTCATGCGCATCATCCTGCCGGCGCAGTTCTTC CATATCCTCGGCGGCCTGCTCTCGGCGGCGCTGATGGCGCAGGACCGCCATGCCCTGCCGGCGCTGGCGCCGCTGATCTA TTCGGCCTGCATCATCCTCGGCGGCCTCGTCGGCGCCTATTATCCGGAGCTGGGCGCGGAGGGCTTCGCCTGGGGCGTGC TCGCGGGCTCCATCATCGGCCCCTTCGCCTTGCCCCTGTTCGGTTGCCTCAGGACGCACATGCGCTGGCATGCGGCGCTG TCGCTGCGCAGCGTGGACCTGCATCGCTACCTGCTGCTGTCGCTGCCCATCATGATCGGCTTCTCCATCGTGGTGGTGGA CGAATGGATCATCAAGAACCAGGCCTCCTTCCTCGCCGCCGGCGCGCTGGCACAGCTGCAATATGGCCGCACGCTCATGA AGGTGCCCATCGGCATCTTCGGCATGGCGCTCGGCGTCGCCTCCTATCCCACCATCAGCCGCCTCGTCGCAGCGGGAGAG GTGGTGGAGGCCTATGGCGTGCTGTCCCGTGCCATCCGGCTGATGCTGGTGGCGATCCTCGCGGCCGGCGTGTGCCTCAC GGTCGCGGGCTATGAGGCGGTCTATCTCATCTGGGGCATGTTCGGCTCCCGCTTCACCGCGGCGGATGCGCTGGAGACCT CGCGGATCCTGGCGCTGCTCACCATTGGCATCGGTGGCTGGGCGGCGCAGAGCGTGATCAGCCGGGGCTTCTACGCGCTC GGCTCCACATGGCTGCCGACTTTGGTGGGCACGGCCGTCACCTTCGCCATGATCCCTTTCTATGTGGTGCTGCGCGAGCG CTTCGGCGCGGAAGGTCTGGCGGTGGCCAGCTCCACCGCGATCCTCGCCTATGTCTTCCTCTTGGGCTGGCTGCAGCGGC GGCGGTTCGAGAAGGAGGCGGCGGCGCGGGGGGCGGTGCTTTCCGCCGCGCCCGGCATGCTCTCCGGGGTCTGGCGGCTC AGCCTCGCGGCGGTGATCGCCATCGGGGTTGGCCTGGCGCTGCGCATGGGCCTCGTGGCAATCCTGCCGGGCAACGGCGT GATCGCCATTCTGGTCCGCGGGGCGGTGCTGTGCCTTGCCGGCATCGGGGTCTATGCGGTGGCGGCGTGGGCGCTCGGCA TCACCGAGCTGCGCGAGGTGGCGCAGAAGGTGGGCCGGGCGCTACGTGGGCGCAGGGGCTGA
Upstream 100 bases:
>100_bases ATCCGCGAGCAGTGGGGCTTGCGAACCCGCTCAAGGATGCCGAGAAGGGCAGGGGGCGTCCGTCGCGGCGCAGAAGGAGC AGGACTTGAGCGGGAGCGGG
Downstream 100 bases:
>100_bases TGCGGCCGACCATCTTCAAAGTCAGCGGGACGAGGTGAAGGTGAATTCGCCGCGCTCGTGGATGGTGTTGGCGCGGCCCA CCAGCAGATTGTCGACCATG
Product: virulence factor MVIN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSPNGSNKEPGQEPSRRSSQARTIGIASAIWGVSIFLSRILGLVREQIIGRTLGASRQADLYFASFTLPDFLNYLLAAGA LSIVFIPIFVKYLEAGDTRRGWEAFSVIANFIVVVGSLAIALMMIFARPLATLVAPGFTDAAEVDELVRLMRIILPAQFF HILGGLLSAALMAQDRHALPALAPLIYSACIILGGLVGAYYPELGAEGFAWGVLAGSIIGPFALPLFGCLRTHMRWHAAL SLRSVDLHRYLLLSLPIMIGFSIVVVDEWIIKNQASFLAAGALAQLQYGRTLMKVPIGIFGMALGVASYPTISRLVAAGE VVEAYGVLSRAIRLMLVAILAAGVCLTVAGYEAVYLIWGMFGSRFTAADALETSRILALLTIGIGGWAAQSVISRGFYAL GSTWLPTLVGTAVTFAMIPFYVVLRERFGAEGLAVASSTAILAYVFLLGWLQRRRFEKEAAARGAVLSAAPGMLSGVWRL SLAAVIAIGVGLALRMGLVAILPGNGVIAILVRGAVLCLAGIGVYAVAAWALGITELREVAQKVGRALRGRRG
Sequences:
>Translated_553_residues MSPNGSNKEPGQEPSRRSSQARTIGIASAIWGVSIFLSRILGLVREQIIGRTLGASRQADLYFASFTLPDFLNYLLAAGA LSIVFIPIFVKYLEAGDTRRGWEAFSVIANFIVVVGSLAIALMMIFARPLATLVAPGFTDAAEVDELVRLMRIILPAQFF HILGGLLSAALMAQDRHALPALAPLIYSACIILGGLVGAYYPELGAEGFAWGVLAGSIIGPFALPLFGCLRTHMRWHAAL SLRSVDLHRYLLLSLPIMIGFSIVVVDEWIIKNQASFLAAGALAQLQYGRTLMKVPIGIFGMALGVASYPTISRLVAAGE VVEAYGVLSRAIRLMLVAILAAGVCLTVAGYEAVYLIWGMFGSRFTAADALETSRILALLTIGIGGWAAQSVISRGFYAL GSTWLPTLVGTAVTFAMIPFYVVLRERFGAEGLAVASSTAILAYVFLLGWLQRRRFEKEAAARGAVLSAAPGMLSGVWRL SLAAVIAIGVGLALRMGLVAILPGNGVIAILVRGAVLCLAGIGVYAVAAWALGITELREVAQKVGRALRGRRG >Mature_552_residues SPNGSNKEPGQEPSRRSSQARTIGIASAIWGVSIFLSRILGLVREQIIGRTLGASRQADLYFASFTLPDFLNYLLAAGAL SIVFIPIFVKYLEAGDTRRGWEAFSVIANFIVVVGSLAIALMMIFARPLATLVAPGFTDAAEVDELVRLMRIILPAQFFH ILGGLLSAALMAQDRHALPALAPLIYSACIILGGLVGAYYPELGAEGFAWGVLAGSIIGPFALPLFGCLRTHMRWHAALS LRSVDLHRYLLLSLPIMIGFSIVVVDEWIIKNQASFLAAGALAQLQYGRTLMKVPIGIFGMALGVASYPTISRLVAAGEV VEAYGVLSRAIRLMLVAILAAGVCLTVAGYEAVYLIWGMFGSRFTAADALETSRILALLTIGIGGWAAQSVISRGFYALG STWLPTLVGTAVTFAMIPFYVVLRERFGAEGLAVASSTAILAYVFLLGWLQRRRFEKEAAARGAVLSAAPGMLSGVWRLS LAAVIAIGVGLALRMGLVAILPGNGVIAILVRGAVLCLAGIGVYAVAAWALGITELREVAQKVGRALRGRRG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=384, Percent_Identity=30.2083333333333, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 58737; Mature: 58605
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNGSNKEPGQEPSRRSSQARTIGIASAIWGVSIFLSRILGLVREQIIGRTLGASRQAD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LYFASFTLPDFLNYLLAAGALSIVFIPIFVKYLEAGDTRRGWEAFSVIANFIVVVGSLAI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ALMMIFARPLATLVAPGFTDAAEVDELVRLMRIILPAQFFHILGGLLSAALMAQDRHALP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALAPLIYSACIILGGLVGAYYPELGAEGFAWGVLAGSIIGPFALPLFGCLRTHMRWHAAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRSVDLHRYLLLSLPIMIGFSIVVVDEWIIKNQASFLAAGALAQLQYGRTLMKVPIGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GMALGVASYPTISRLVAAGEVVEAYGVLSRAIRLMLVAILAAGVCLTVAGYEAVYLIWGM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSRFTAADALETSRILALLTIGIGGWAAQSVISRGFYALGSTWLPTLVGTAVTFAMIPF HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YVVLRERFGAEGLAVASSTAILAYVFLLGWLQRRRFEKEAAARGAVLSAAPGMLSGVWRL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH SLAAVIAIGVGLALRMGLVAILPGNGVIAILVRGAVLCLAGIGVYAVAAWALGITELREV HHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKVGRALRGRRG HHHHHHHHCCCCC >Mature Secondary Structure SPNGSNKEPGQEPSRRSSQARTIGIASAIWGVSIFLSRILGLVREQIIGRTLGASRQAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LYFASFTLPDFLNYLLAAGALSIVFIPIFVKYLEAGDTRRGWEAFSVIANFIVVVGSLAI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ALMMIFARPLATLVAPGFTDAAEVDELVRLMRIILPAQFFHILGGLLSAALMAQDRHALP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALAPLIYSACIILGGLVGAYYPELGAEGFAWGVLAGSIIGPFALPLFGCLRTHMRWHAAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRSVDLHRYLLLSLPIMIGFSIVVVDEWIIKNQASFLAAGALAQLQYGRTLMKVPIGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GMALGVASYPTISRLVAAGEVVEAYGVLSRAIRLMLVAILAAGVCLTVAGYEAVYLIWGM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSRFTAADALETSRILALLTIGIGGWAAQSVISRGFYALGSTWLPTLVGTAVTFAMIPF HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YVVLRERFGAEGLAVASSTAILAYVFLLGWLQRRRFEKEAAARGAVLSAAPGMLSGVWRL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH SLAAVIAIGVGLALRMGLVAILPGNGVIAILVRGAVLCLAGIGVYAVAAWALGITELREV HHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKVGRALRGRRG HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]