Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248162
Identifier: 154248162
GI number: 154248162
Start: 4705561
End: 4706727
Strand: Direct
Name: 154248162
Synonym: Xaut_4242
Alternate gene names: NA
Gene position: 4705561-4706727 (Clockwise)
Preceding gene: 154248161
Following gene: 154248164
Centisome position: 88.63
GC content: 67.69
Gene sequence:
>1167_bases GTGACCCTGCTCTCGCGCCCGCGCCGCTATATCGGCGTCCTCGTGGCCGGCCTGTTCGGCTTCCTGTTGCTGTCCAACCT CATCCCCGATCCGGTGGCCTCGGGCCAATGGCGGGTGGCGATCCCCGACAGCTTCACCTGGGACCAGAAGCTGAACTACA AGTTCCGCAACATCGGCATCTACATCCAGGACAATTTCGGCTTCCGCGCCACTTTGCCGGTGCTGCGGCAGAACCTGCGC GAGGCTCTGGGCTCCCCCGACAGCCGGCCCTTCTACACCGGCCGCGACGGCCAGCTGTTCTGGGGCCGCGAGCAGGCGCC GGCCCAATCGGCGGGGGCGCTGGTGCGTGCTGCCAACGTGGAGCGCTTCGTGACCATGGTCGGCGAGATGCAGCGCGTGC TGGCGCCGAAGGGTACCCGCATCGTGGTCGCGATCCCGCCGAACGCCCAGTCGGTGGAACTGGAGGCGCTGCCCACCTGG TATGACAAGCTGAACTATCCCGTTACCGAGTACGACCTCGCCCTTGCCGGCTTGAAGGCGGAGGGCGTCACCGCCGTGGA CCTGCGGCCGGTAATCAAGGCTGGCCCCCGGCCCCGGTATCTGGTGACCGACACGCACTGGAACAGCCGCTCCAGCGTCC TGTCCTTCAATGCGGTGATGGTGGCGGCGGGGCATCCCGACTGGCAGGTGGACCCGGCCGCCGTGCTGGGCCCGACGTCC CCCTCCGCCCGTGGCGACCTGCTGCGCACCACCCGCCTGCCGCCGAAGGTGAAGGAAGAAGACGAACCGTTCGCCATCAA GGACCGCGCTGCTGCGCCGCGCCTCGATCCGGCGCTGAAGCACCACAACGAGCACATTGCCTTCAAGTCGCTAGCCTATG ACTACGCGCCCACGGGCCAGCGGGTGCTGATCCTCGGGGATTCCTTCACCGGCGGGGCATGGCCGCGCCTGTTCCTGAAT GCGAATGTGAGCGTGGTGGCCTGGGTTCACGAATCCCGGCGGGTCACCGGCTCATGCGACTTCAACTTCGATGATGTGAA GGCCTTCGCCCCGGACCTCATCATCATGGCCCGGACCGAACGCTTCTTCCCGTGCTACGGCGACAATTGGCCGGCCGGCC TGCCGCGGCCGTGGTCCCACGCCGTGCCGAACAACGTGGCGCCCTGA
Upstream 100 bases:
>100_bases CTACGCCTTCATCGCCGTGCTGATGCTGGCGAGCGTGGCCTGGGTGGGCGGCACCACCGCCACCCCCTTCCTCTATTACC GGTTCTGAGGAGGCGCCGCC
Downstream 100 bases:
>100_bases CGGCGCACAAATGCCCTTCCACCCGGACATGCCGGGTGGCTGTCTCTCGGGACGAAAGGCGCTCAGACGCCGAAGCTGGA CCCGCAGCCGCACTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTLLSRPRRYIGVLVAGLFGFLLLSNLIPDPVASGQWRVAIPDSFTWDQKLNYKFRNIGIYIQDNFGFRATLPVLRQNLR EALGSPDSRPFYTGRDGQLFWGREQAPAQSAGALVRAANVERFVTMVGEMQRVLAPKGTRIVVAIPPNAQSVELEALPTW YDKLNYPVTEYDLALAGLKAEGVTAVDLRPVIKAGPRPRYLVTDTHWNSRSSVLSFNAVMVAAGHPDWQVDPAAVLGPTS PSARGDLLRTTRLPPKVKEEDEPFAIKDRAAAPRLDPALKHHNEHIAFKSLAYDYAPTGQRVLILGDSFTGGAWPRLFLN ANVSVVAWVHESRRVTGSCDFNFDDVKAFAPDLIIMARTERFFPCYGDNWPAGLPRPWSHAVPNNVAP
Sequences:
>Translated_388_residues MTLLSRPRRYIGVLVAGLFGFLLLSNLIPDPVASGQWRVAIPDSFTWDQKLNYKFRNIGIYIQDNFGFRATLPVLRQNLR EALGSPDSRPFYTGRDGQLFWGREQAPAQSAGALVRAANVERFVTMVGEMQRVLAPKGTRIVVAIPPNAQSVELEALPTW YDKLNYPVTEYDLALAGLKAEGVTAVDLRPVIKAGPRPRYLVTDTHWNSRSSVLSFNAVMVAAGHPDWQVDPAAVLGPTS PSARGDLLRTTRLPPKVKEEDEPFAIKDRAAAPRLDPALKHHNEHIAFKSLAYDYAPTGQRVLILGDSFTGGAWPRLFLN ANVSVVAWVHESRRVTGSCDFNFDDVKAFAPDLIIMARTERFFPCYGDNWPAGLPRPWSHAVPNNVAP >Mature_387_residues TLLSRPRRYIGVLVAGLFGFLLLSNLIPDPVASGQWRVAIPDSFTWDQKLNYKFRNIGIYIQDNFGFRATLPVLRQNLRE ALGSPDSRPFYTGRDGQLFWGREQAPAQSAGALVRAANVERFVTMVGEMQRVLAPKGTRIVVAIPPNAQSVELEALPTWY DKLNYPVTEYDLALAGLKAEGVTAVDLRPVIKAGPRPRYLVTDTHWNSRSSVLSFNAVMVAAGHPDWQVDPAAVLGPTSP SARGDLLRTTRLPPKVKEEDEPFAIKDRAAAPRLDPALKHHNEHIAFKSLAYDYAPTGQRVLILGDSFTGGAWPRLFLNA NVSVVAWVHESRRVTGSCDFNFDDVKAFAPDLIIMARTERFFPCYGDNWPAGLPRPWSHAVPNNVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43037; Mature: 42905
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSRPRRYIGVLVAGLFGFLLLSNLIPDPVASGQWRVAIPDSFTWDQKLNYKFRNIGI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEE YIQDNFGFRATLPVLRQNLREALGSPDSRPFYTGRDGQLFWGREQAPAQSAGALVRAANV EEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCHHHCCEEEHHHH ERFVTMVGEMQRVLAPKGTRIVVAIPPNAQSVELEALPTWYDKLNYPVTEYDLALAGLKA HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHCCCCCCHHHHEEECCCC EGVTAVDLRPVIKAGPRPRYLVTDTHWNSRSSVLSFNAVMVAAGHPDWQVDPAAVLGPTS CCEEEEECCHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCC PSARGDLLRTTRLPPKVKEEDEPFAIKDRAAAPRLDPALKHHNEHIAFKSLAYDYAPTGQ CCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEHHHEECCCCCCC RVLILGDSFTGGAWPRLFLNANVSVVAWVHESRRVTGSCDFNFDDVKAFAPDLIIMARTE EEEEEECCCCCCCCCEEEEECCEEEEEEEECCCEEEEECCCCHHHHHHHCCCEEEEEECC RFFPCYGDNWPAGLPRPWSHAVPNNVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLLSRPRRYIGVLVAGLFGFLLLSNLIPDPVASGQWRVAIPDSFTWDQKLNYKFRNIGI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEE YIQDNFGFRATLPVLRQNLREALGSPDSRPFYTGRDGQLFWGREQAPAQSAGALVRAANV EEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCHHHCCEEEHHHH ERFVTMVGEMQRVLAPKGTRIVVAIPPNAQSVELEALPTWYDKLNYPVTEYDLALAGLKA HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHCCCCCCHHHHEEECCCC EGVTAVDLRPVIKAGPRPRYLVTDTHWNSRSSVLSFNAVMVAAGHPDWQVDPAAVLGPTS CCEEEEECCHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCC PSARGDLLRTTRLPPKVKEEDEPFAIKDRAAAPRLDPALKHHNEHIAFKSLAYDYAPTGQ CCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEHHHEECCCCCCC RVLILGDSFTGGAWPRLFLNANVSVVAWVHESRRVTGSCDFNFDDVKAFAPDLIIMARTE EEEEEECCCCCCCCCEEEEECCEEEEEEEECCCEEEEECCCCHHHHHHHCCCEEEEEECC RFFPCYGDNWPAGLPRPWSHAVPNNVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA