Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248125

Identifier: 154248125

GI number: 154248125

Start: 4655815

End: 4656741

Strand: Direct

Name: 154248125

Synonym: Xaut_4205

Alternate gene names: NA

Gene position: 4655815-4656741 (Clockwise)

Preceding gene: 154248124

Following gene: 154248131

Centisome position: 87.7

GC content: 68.5

Gene sequence:

>927_bases
ATGCTCCCCGACACATCCCGAACCGATGGGCCCCTCGGCCCGCGCGACTTCGTTCTGTACGCGGTGTGCGTGCTGATCTT
CGGCTCGGGCTGGCTGCCGCTGAAGCTCCAGCTGGGCGTGGTGGCGCCCGAGGTGTCGGGCACCTGGCGCTTTCTCGTCG
CGAGCCTTGCCATGCTGGTGTTCGTGATCGCGACAGGCGCGCCGCTCGCCTTCAAGGCGCGGGATCACGTCTTGTTCGCG
GGCCTCGGGGCGACGCTGTTCTCGCTGAATTTCCTGTTCTTCTACTATGCCGGCTATCACCTGCCGTCGGGGCTGATGTC
GGTGATCTTCTCCCTTTCCTCCATCCTCATTCCCCTGTTCTCGGCGCTGTTCCTGCGCGTGCCGCTGCGCCGGCAGATCC
TGTTCGGTGCCCTGGCGGGCATCGCCGGCACCGCGCTGGTGTTCGGGCCAAGCCTTGCCGACGGGCGGGGCATCAACGGC
GCGGGGGAGGGGCTGGCGCTGGGCGTCGCCGGGACGGAGAGCTTTGCGTTCGGCAGCCTGCTGTCGGGGGTGGCCGGGCG
GCGGGGCTATCCCATGGCATCCACCAGCTTCTGGGGCTTTGCCTACGGCTTCCTCATCCTGCTGATGGTAAGCCTGGCGC
GGGGCGCGCCATTCATGGTGGACTGGAGCGTGCGCTACCTGGGCTCGCTGGGCTTCCTGATCGTGGTCCAGACGCTGGCG
GGCTTCGCCGTCTACATCCAGCTGATCCGGCGCATCGGGGCCAACCGCGCCGGCTACGGCACGGTCATGTTCCCCATCGT
GGCGCTGTTCCTCTCCACCTGGTTCGAGGACTACCACTGGACGGCGACGGCCGCCGCCGGAATCGCGCTGGTGCTCGCCG
GCAACCTCCTGGTGCTCCGGCAGCCGAAGCCGGCCACCGGAGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGGTGTTGGGGCATCGCCCCAGCCTCGTCCGCAGGCCGCGTTGCGGGGGCGGCGGGCGCGTGCTCTACCTTGGGGC
TCCTGCCTGGATCTGCCCCC

Downstream 100 bases:

>100_bases
CGAAAGCCGATTAGCCCTTCACCACCACCGGCATGCGGCCGGCGGGCGGGGTGTTGCGCGAGCGCTGGGTGCGCACGATG
CCGTCGATGACGGTCATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLPDTSRTDGPLGPRDFVLYAVCVLIFGSGWLPLKLQLGVVAPEVSGTWRFLVASLAMLVFVIATGAPLAFKARDHVLFA
GLGATLFSLNFLFFYYAGYHLPSGLMSVIFSLSSILIPLFSALFLRVPLRRQILFGALAGIAGTALVFGPSLADGRGING
AGEGLALGVAGTESFAFGSLLSGVAGRRGYPMASTSFWGFAYGFLILLMVSLARGAPFMVDWSVRYLGSLGFLIVVQTLA
GFAVYIQLIRRIGANRAGYGTVMFPIVALFLSTWFEDYHWTATAAAGIALVLAGNLLVLRQPKPATGA

Sequences:

>Translated_308_residues
MLPDTSRTDGPLGPRDFVLYAVCVLIFGSGWLPLKLQLGVVAPEVSGTWRFLVASLAMLVFVIATGAPLAFKARDHVLFA
GLGATLFSLNFLFFYYAGYHLPSGLMSVIFSLSSILIPLFSALFLRVPLRRQILFGALAGIAGTALVFGPSLADGRGING
AGEGLALGVAGTESFAFGSLLSGVAGRRGYPMASTSFWGFAYGFLILLMVSLARGAPFMVDWSVRYLGSLGFLIVVQTLA
GFAVYIQLIRRIGANRAGYGTVMFPIVALFLSTWFEDYHWTATAAAGIALVLAGNLLVLRQPKPATGA
>Mature_308_residues
MLPDTSRTDGPLGPRDFVLYAVCVLIFGSGWLPLKLQLGVVAPEVSGTWRFLVASLAMLVFVIATGAPLAFKARDHVLFA
GLGATLFSLNFLFFYYAGYHLPSGLMSVIFSLSSILIPLFSALFLRVPLRRQILFGALAGIAGTALVFGPSLADGRGING
AGEGLALGVAGTESFAFGSLLSGVAGRRGYPMASTSFWGFAYGFLILLMVSLARGAPFMVDWSVRYLGSLGFLIVVQTLA
GFAVYIQLIRRIGANRAGYGTVMFPIVALFLSTWFEDYHWTATAAAGIALVLAGNLLVLRQPKPATGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32691; Mature: 32691

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDTSRTDGPLGPRDFVLYAVCVLIFGSGWLPLKLQLGVVAPEVSGTWRFLVASLAMLV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
FVIATGAPLAFKARDHVLFAGLGATLFSLNFLFFYYAGYHLPSGLMSVIFSLSSILIPLF
HHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SALFLRVPLRRQILFGALAGIAGTALVFGPSLADGRGINGAGEGLALGVAGTESFAFGSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
LSGVAGRRGYPMASTSFWGFAYGFLILLMVSLARGAPFMVDWSVRYLGSLGFLIVVQTLA
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
GFAVYIQLIRRIGANRAGYGTVMFPIVALFLSTWFEDYHWTATAAAGIALVLAGNLLVLR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEE
QPKPATGA
CCCCCCCC
>Mature Secondary Structure
MLPDTSRTDGPLGPRDFVLYAVCVLIFGSGWLPLKLQLGVVAPEVSGTWRFLVASLAMLV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
FVIATGAPLAFKARDHVLFAGLGATLFSLNFLFFYYAGYHLPSGLMSVIFSLSSILIPLF
HHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SALFLRVPLRRQILFGALAGIAGTALVFGPSLADGRGINGAGEGLALGVAGTESFAFGSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
LSGVAGRRGYPMASTSFWGFAYGFLILLMVSLARGAPFMVDWSVRYLGSLGFLIVVQTLA
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
GFAVYIQLIRRIGANRAGYGTVMFPIVALFLSTWFEDYHWTATAAAGIALVLAGNLLVLR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEE
QPKPATGA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA