Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is pyrG
Identifier: 154248120
GI number: 154248120
Start: 4649754
End: 4651382
Strand: Direct
Name: pyrG
Synonym: Xaut_4200
Alternate gene names: 154248120
Gene position: 4649754-4651382 (Clockwise)
Preceding gene: 154248119
Following gene: 154248121
Centisome position: 87.58
GC content: 66.54
Gene sequence:
>1629_bases ATGGCGCGCTATATCTTCATCACCGGCGGCGTCGTGTCTTCCCTGGGCAAGGGCCTCGCCGCCGCGGCTCTCGGCGCGCT TCTCCAGGCGCGCGGCTATACCGTCCGGCTGCGCAAGCTGGACCCCTACCTCAACGTCGATCCGGGCACCATGAGCCCGT ACCAGCACGGCGAGGTGTTCGTGACTGACGACGGGGCCGAGACCGATCTCGACCTCGGCCATTACGAGCGCTTCACCGGT CATCCGGCGACGAAGCAGGACAACATCACCACCGGCCGCATCTATCAGGACATCCTGACCAAGGAGCGCCGCGGCGACTA TCTCGGCGCCACCATCCAGGTCATCCCCCACGTCACCAATGCGATCAAGGACTTCGTCCTGGAAGGCAACGAGGGCTTCG ACTTCGTGCTGATCGAGGTGGGCGGCACGGTGGGCGACATCGAGGGCCTGCCCTTCTTCGAAGCCACCCGCCAGCTGAAG AACGAGCTGCCGCGCGGCCACGCCATCTTCATCCACCTCACCTTGATGCCCTATATCCCGTCCGCGGGCGAACTAAAGAC CAAGCCGACCCAGCATTCGGTGAAGGAGTTGCGCTCCATCGGCATCCAGCCCGACATCCTGCTCTGCCGCACGGATCGCG AGATTCCGCGCGAGGAGCGGCGCAAGCTCTCGCTGTTCTGCAACGTGCGCGAGACGGCGGTGATCGAGGCGCGGGACGTG GACAACATCTATGCCGTCCCCTCCGCCTACCACGCGGAAGGCCTCGACAAGGAAGTGCTGGCCGCCTTCAACATCGAGCC GGCACCGGCGCCCAACCTCAAGCGCTGGACCGACATCGAGGGGCGCGTGCGCAACCCGGAGGGCGAGGTCACCATCGCCA TCGTGGGCAAATATACCGGCCTGAAGGACGCCTATAAGTCGCTGATCGAGGCGCTTGCCCATGGCGGCATCGCCCACAAG GTGAAGGTCAATCTCGACTGGATCGAGAGCGAGACCTTCGAGCGCGAGGACCCCGCGCCGTTCCTGGAGCACGTGCACGG CATCCTGGTGCCCGGCGGCTTCGGCCAGCGTGGCGCGGAAGGCAAGATCCGCGCGGCCCGCTTCGCCCGCGAGCGCAAGG TGCCCTATCTCGGCATCTGCTTCGGCATGCAGATGGCGGTGATCGAGGCGGCGCGCAACCTTGCGGGCATCCCTGACGCC AATTCCACGGAGTTCGGACCCACCAGCGAGCCGGTGGTGGGCCTGCTCACCGAATGGCTGAAGGGCAACGAGCTGGAGCG CCGCAGCGCTGCCGGGGATCTGGGCGGCACCATGCGCCTCGGCGCCTATGCCGCGCATCTGGAGCCCGGCAGCCGGGTGG AGGCGGTCTATGGCGGGCGCGACATCTTCGAGCGCCACCGCCACCGCTATGAGGTGAATACCGCCTATCGCCAACGCCTT GAGCAGCATGGCCTGCGCTTCTCCGGCATGTCGCCGGACGGCCTCCTGCCGGAGATCGTGGAATATGGCGACCACCCCTG GTTCATCGGGGTGCAGTTCCATCCGGAGCTGAAGTCGCGGCCGTTCCAGCCCCACCCGCTGTTCGCCTCGTTCGTGGGTG CGGCCATGGAGCAGAGCCGGCTGGTGTGA
Upstream 100 bases:
>100_bases CGCGATTCGCGCGGCGACATGCTTTCCCCACAGGCGAGGCGAGGCCGACACCGGCTTCGCCCTCGCCGAATCGCGTTTGC ACGAGGTAAGGTCGAAGCCC
Downstream 100 bases:
>100_bases CCTTCCGGCAGGGACAGCGGCAGGTATTCTCCTGCCGGTTGTTTCCCTCCCGGCCGCCGCCGCTCTAAGCTCCCCCCGGA TGAGTCGGGGAGGGGAGTTG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MARYIFITGGVVSSLGKGLAAAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG HPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLK NELPRGHAIFIHLTLMPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPREERRKLSLFCNVRETAVIEARDV DNIYAVPSAYHAEGLDKEVLAAFNIEPAPAPNLKRWTDIEGRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALAHGGIAHK VKVNLDWIESETFEREDPAPFLEHVHGILVPGGFGQRGAEGKIRAARFARERKVPYLGICFGMQMAVIEAARNLAGIPDA NSTEFGPTSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYAAHLEPGSRVEAVYGGRDIFERHRHRYEVNTAYRQRL EQHGLRFSGMSPDGLLPEIVEYGDHPWFIGVQFHPELKSRPFQPHPLFASFVGAAMEQSRLV
Sequences:
>Translated_542_residues MARYIFITGGVVSSLGKGLAAAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG HPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLK NELPRGHAIFIHLTLMPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPREERRKLSLFCNVRETAVIEARDV DNIYAVPSAYHAEGLDKEVLAAFNIEPAPAPNLKRWTDIEGRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALAHGGIAHK VKVNLDWIESETFEREDPAPFLEHVHGILVPGGFGQRGAEGKIRAARFARERKVPYLGICFGMQMAVIEAARNLAGIPDA NSTEFGPTSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYAAHLEPGSRVEAVYGGRDIFERHRHRYEVNTAYRQRL EQHGLRFSGMSPDGLLPEIVEYGDHPWFIGVQFHPELKSRPFQPHPLFASFVGAAMEQSRLV >Mature_541_residues ARYIFITGGVVSSLGKGLAAAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGH PATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKN ELPRGHAIFIHLTLMPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPREERRKLSLFCNVRETAVIEARDVD NIYAVPSAYHAEGLDKEVLAAFNIEPAPAPNLKRWTDIEGRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALAHGGIAHKV KVNLDWIESETFEREDPAPFLEHVHGILVPGGFGQRGAEGKIRAARFARERKVPYLGICFGMQMAVIEAARNLAGIPDAN STEFGPTSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYAAHLEPGSRVEAVYGGRDIFERHRHRYEVNTAYRQRLE QHGLRFSGMSPDGLLPEIVEYGDHPWFIGVQFHPELKSRPFQPHPLFASFVGAAMEQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=44.7037701974865, Blast_Score=474, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=555, Percent_Identity=44.1441441441441, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI28559083, Length=555, Percent_Identity=44.1441441441441, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI221316689, Length=555, Percent_Identity=44.1441441441441, Blast_Score=459, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=538, Percent_Identity=59.1078066914498, Blast_Score=624, Evalue=1e-180, Organism=Caenorhabditis elegans, GI25148299, Length=612, Percent_Identity=36.9281045751634, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=39.3298059964727, Blast_Score=415, Evalue=1e-117, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=44.0071556350626, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=42.970297029703, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60075; Mature: 59944
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00442 GATASE_TYPE_I ; PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYIFITGGVVSSLGKGLAAAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGHPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKNELPRGHAIFIHLTLMPYIP HHHHHEECCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPREERRKLSLFCNVRETAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHEEEEEEECCHHEEEEECCC DNIYAVPSAYHAEGLDKEVLAAFNIEPAPAPNLKRWTDIEGRVRNPEGEVTIAIVGKYTG CCEEECCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCC LKDAYKSLIEALAHGGIAHKVKVNLDWIESETFEREDPAPFLEHVHGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GKIRAARFARERKVPYLGICFGMQMAVIEAARNLAGIPDANSTEFGPTSEPVVGLLTEWL CCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH KGNELERRSAAGDLGGTMRLGAYAAHLEPGSRVEAVYGGRDIFERHRHRYEVNTAYRQRL CCCCHHHHHCCCCCCCCEECCEEEEECCCCCCEEEEECCHHHHHHHHHEEECCHHHHHHH EQHGLRFSGMSPDGLLPEIVEYGDHPWFIGVQFHPELKSRPFQPHPLFASFVGAAMEQSR HHCCCEECCCCCCCCCHHHHHCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHC LV CC >Mature Secondary Structure ARYIFITGGVVSSLGKGLAAAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGHPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKNELPRGHAIFIHLTLMPYIP HHHHHEECCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPREERRKLSLFCNVRETAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHEEEEEEECCHHEEEEECCC DNIYAVPSAYHAEGLDKEVLAAFNIEPAPAPNLKRWTDIEGRVRNPEGEVTIAIVGKYTG CCEEECCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCC LKDAYKSLIEALAHGGIAHKVKVNLDWIESETFEREDPAPFLEHVHGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GKIRAARFARERKVPYLGICFGMQMAVIEAARNLAGIPDANSTEFGPTSEPVVGLLTEWL CCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH KGNELERRSAAGDLGGTMRLGAYAAHLEPGSRVEAVYGGRDIFERHRHRYEVNTAYRQRL CCCCHHHHHCCCCCCCCEECCEEEEECCCCCCEEEEECCHHHHHHHHHEEECCHHHHHHH EQHGLRFSGMSPDGLLPEIVEYGDHPWFIGVQFHPELKSRPFQPHPLFASFVGAAMEQSR HHCCCEECCCCCCCCCHHHHHCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHC LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]