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The map label for this gene is ygaV [C]

Identifier: 154248104

GI number: 154248104

Start: 4629059

End: 4629466

Strand: Direct

Name: ygaV [C]

Synonym: Xaut_4184

Alternate gene names: 154248104

Gene position: 4629059-4629466 (Clockwise)

Preceding gene: 154248102

Following gene: 154248105

Centisome position: 87.19

GC content: 72.55

Gene sequence:

>408_bases
ATGAATATGACGCCCTTTCCCCACCCCGGCGGGCCAGACGCCGCGGACCCGCCGCAGGCGGGCTCCGAGCGCCCGGTCGA
GGACCGTGCGGCCCTCGCCGAGCGGCTGCGGGCGCTGGCCCATCCCGTGCGCCTGCGGGTGCTGGAAACGCTCGCCGGCC
AGGACCGCTGCGTGTGCGGCGAGATCGTCCGGGGCCTGCCCCTTGCGCAGTCCACCGTCTCGCAACATCTGAAGGTCCTC
ACGGACTCAGGCTTGCTCCGGAGCCGGATCGAGGGCCAGCGCACCGCCTACTGCCTCGACCGGGCTGCCATTTCCGCGCT
CAAGGGTGAGATCGATGCTCTGTTCTCGGCGCTGTTGCCGCCTGGGGACTGCGGCGCGCCGCCCGCGGGCCGCACCGAAG
ACCGATAG

Upstream 100 bases:

>100_bases
TTGTCGCTGCGACGCGGGCATGACGACAGCGTAGCGCATGCGCCGGCCGCAGCGGACAGCGCTTGAAGTCGCCTCATTCA
TCGGCTATCGCCGATAGACG

Downstream 100 bases:

>100_bases
GCCATCATGTCCAAGACGCCTCCTCCCGCCGCCGGCCCGCGCCGGCCGGTCGTTTCCGCTGACGCCCTGCTCGACACCAT
CCGCGGCCTCTGGCCCTATC

Product: regulatory protein ArsR

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Regulatory Protein; Transcription Regulator ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Arsr Family

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNMTPFPHPGGPDAADPPQAGSERPVEDRAALAERLRALAHPVRLRVLETLAGQDRCVCGEIVRGLPLAQSTVSQHLKVL
TDSGLLRSRIEGQRTAYCLDRAAISALKGEIDALFSALLPPGDCGAPPAGRTEDR

Sequences:

>Translated_135_residues
MNMTPFPHPGGPDAADPPQAGSERPVEDRAALAERLRALAHPVRLRVLETLAGQDRCVCGEIVRGLPLAQSTVSQHLKVL
TDSGLLRSRIEGQRTAYCLDRAAISALKGEIDALFSALLPPGDCGAPPAGRTEDR
>Mature_135_residues
MNMTPFPHPGGPDAADPPQAGSERPVEDRAALAERLRALAHPVRLRVLETLAGQDRCVCGEIVRGLPLAQSTVSQHLKVL
TDSGLLRSRIEGQRTAYCLDRAAISALKGEIDALFSALLPPGDCGAPPAGRTEDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14342; Mature: 14342

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTPFPHPGGPDAADPPQAGSERPVEDRAALAERLRALAHPVRLRVLETLAGQDRCVCG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EIVRGLPLAQSTVSQHLKVLTDSGLLRSRIEGQRTAYCLDRAAISALKGEIDALFSALLP
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDCGAPPAGRTEDR
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MNMTPFPHPGGPDAADPPQAGSERPVEDRAALAERLRALAHPVRLRVLETLAGQDRCVCG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EIVRGLPLAQSTVSQHLKVLTDSGLLRSRIEGQRTAYCLDRAAISALKGEIDALFSALLP
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDCGAPPAGRTEDR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA