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The map label for this gene is ybbF [C]

Identifier: 154248029

GI number: 154248029

Start: 4544521

End: 4545330

Strand: Direct

Name: ybbF [C]

Synonym: Xaut_4108

Alternate gene names: 154248029

Gene position: 4544521-4545330 (Clockwise)

Preceding gene: 154248028

Following gene: 154248030

Centisome position: 85.6

GC content: 63.09

Gene sequence:

>810_bases
GTGAGCGACAGTCCCCAAGCGCGCCGCTTCCGCGCCCTTTTCATTTCCGATGTCCATCTCGGCACCAAGGGCTGCCAGGC
GGATCTCCTCATCGACTTCCTCAAGTACCACGACGCCGACACCATCTATTTGGTGGGCGATATCGTGGACGGCTGGCGGC
TGAAGTCCTCCTGGTACTGGCCGCAGAAGCACAACGACGTGGTGCAGAAGCTGCTGCGCAAGGGCCGCAAGGGCACGCGC
ATGGTCTATCTGCCCGGCAACCACGACGAATTCCTGCGCGATTATTACGGCACCCATTTCGGCGGCATCGAGGTGGTGGA
AACCGCCATCCACGAGGCCGCAGACGGCAAGCGCTACCTCGTCATCCATGGCGACGTGTTCGACGTGGTGGTGCGGCACG
CCAAGTGGCTCGCCTTCCTCGGCGACTGGGCCTATTCCGCCGCGCTGACCACCAACACCTATGTGAACAAGGTGCGTCGC
CGGCTCGGCCTCACCTACTGGTCGCTGAGCCAGTGGGCGAAGCTGAAGGTGAAGAACGCCGTCAACTACATCGGCAAGTT
CGAGGAAGCGGTGGCCGACGAGGCCAAGCGCAACGGGGTGGACGGCGTCATCTGCGGTCATATCCACCACGCGGTCATTC
ACGACCAGTTCGGCGTCAGCTATGTGAATTGCGGCGACTGGGTGGAAAGCTGCACCGCCATCGCCGAATATGAAGACGGC
CACTTGGAGATCATCTGCTGGACGCGGAACCTCCAGAAGGCCCCGGCGGAGCAGCAGGACATGGTCGAGGGGGCGCGCGC
GGCGGCTTGA

Upstream 100 bases:

>100_bases
CAAGGTCAGTTGTCGAGACTTCGACGTCGAAAGGCCGTCGCAAGTCGCCTGCCCGGTGAGGGAAGTTCCCCAGCGGCAGG
TCAAGGCGGGAGGTGATTGC

Downstream 100 bases:

>100_bases
TGCGGGTTCTTGTGGCCACCGATGCGTGGCATCCACAGATCAACGGTGTGGTGCGCTCCCTGGAGTACACCGCAAATGAA
GCGGCCGCCCTCGGTGCAGA

Product: metallophosphoesterase

Products: 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1; UMP [C]

Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSDSPQARRFRALFISDVHLGTKGCQADLLIDFLKYHDADTIYLVGDIVDGWRLKSSWYWPQKHNDVVQKLLRKGRKGTR
MVYLPGNHDEFLRDYYGTHFGGIEVVETAIHEAADGKRYLVIHGDVFDVVVRHAKWLAFLGDWAYSAALTTNTYVNKVRR
RLGLTYWSLSQWAKLKVKNAVNYIGKFEEAVADEAKRNGVDGVICGHIHHAVIHDQFGVSYVNCGDWVESCTAIAEYEDG
HLEIICWTRNLQKAPAEQQDMVEGARAAA

Sequences:

>Translated_269_residues
MSDSPQARRFRALFISDVHLGTKGCQADLLIDFLKYHDADTIYLVGDIVDGWRLKSSWYWPQKHNDVVQKLLRKGRKGTR
MVYLPGNHDEFLRDYYGTHFGGIEVVETAIHEAADGKRYLVIHGDVFDVVVRHAKWLAFLGDWAYSAALTTNTYVNKVRR
RLGLTYWSLSQWAKLKVKNAVNYIGKFEEAVADEAKRNGVDGVICGHIHHAVIHDQFGVSYVNCGDWVESCTAIAEYEDG
HLEIICWTRNLQKAPAEQQDMVEGARAAA
>Mature_268_residues
SDSPQARRFRALFISDVHLGTKGCQADLLIDFLKYHDADTIYLVGDIVDGWRLKSSWYWPQKHNDVVQKLLRKGRKGTRM
VYLPGNHDEFLRDYYGTHFGGIEVVETAIHEAADGKRYLVIHGDVFDVVVRHAKWLAFLGDWAYSAALTTNTYVNKVRRR
LGLTYWSLSQWAKLKVKNAVNYIGKFEEAVADEAKRNGVDGVICGHIHHAVIHDQFGVSYVNCGDWVESCTAIAEYEDGH
LEIICWTRNLQKAPAEQQDMVEGARAAA

Specific function: Lipid A biosynthesis [C]

COG id: COG2908

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30571; Mature: 30440

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSPQARRFRALFISDVHLGTKGCQADLLIDFLKYHDADTIYLVGDIVDGWRLKSSWYW
CCCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCC
PQKHNDVVQKLLRKGRKGTRMVYLPGNHDEFLRDYYGTHFGGIEVVETAIHEAADGKRYL
CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
VIHGDVFDVVVRHAKWLAFLGDWAYSAALTTNTYVNKVRRRLGLTYWSLSQWAKLKVKNA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VNYIGKFEEAVADEAKRNGVDGVICGHIHHAVIHDQFGVSYVNCGDWVESCTAIAEYEDG
HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCC
HLEIICWTRNLQKAPAEQQDMVEGARAAA
CEEEEEEECCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SDSPQARRFRALFISDVHLGTKGCQADLLIDFLKYHDADTIYLVGDIVDGWRLKSSWYW
CCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCC
PQKHNDVVQKLLRKGRKGTRMVYLPGNHDEFLRDYYGTHFGGIEVVETAIHEAADGKRYL
CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
VIHGDVFDVVVRHAKWLAFLGDWAYSAALTTNTYVNKVRRRLGLTYWSLSQWAKLKVKNA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VNYIGKFEEAVADEAKRNGVDGVICGHIHHAVIHDQFGVSYVNCGDWVESCTAIAEYEDG
HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCC
HLEIICWTRNLQKAPAEQQDMVEGARAAA
CEEEEEEECCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; UDP-2,3-bis(3-hydroxymyristoyl)glucosamine [C]

Specific reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1 + UMP [C]

General reaction: Lipid A biosynthesis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA