Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247924
Identifier: 154247924
GI number: 154247924
Start: 4430986
End: 4431774
Strand: Direct
Name: 154247924
Synonym: Xaut_4002
Alternate gene names: NA
Gene position: 4430986-4431774 (Clockwise)
Preceding gene: 154247923
Following gene: 154247925
Centisome position: 83.46
GC content: 55.64
Gene sequence:
>789_bases TTGCCGGGACCATCAGAGAAGACGATCCGACGACTGTTCGCAATGTCGGGAAACATGTGCACATTTCCGGGATGCTCATC CCGAATATTCGAAGCGACGGGAACAGTGACCGGCGAGGTCTGCCATATTCGGGCTCAAAGCTCAGGTGGCCCTCGGTTTG ATAGCACGCAGACAGAGGACGCACGGCACGCCTTCGCGAATTTGATCCTGCTATGCCGCCGGCACCATAAGATCATTGAC GCGGAGCCCGGACTCTATTCGGTCGACACTTTGGAGGAGATCAAGACGATCCAGGAAGAACATCTCGGCCGCCCCAAGCA GGAAACGGATGGTTTCTTTGCCAAGGTTCTGCTTAACGCGATGTCGCGTATTGAGACCAGAAACAATACGGGCAATGTGG TCATCGGTAGCCTTGGCGCAATCGTGGCCGGAACCCTGAATTTCAAGGGTTCGGGAAAAGCTCCTAGGTTCCAGACCGCG GCCGGGACAATCGGTGCCGATCAGGAAGCAAGCCGATATGTCCAATATCTGATCAGGCAATACAATCAATTCGCCTCGGC CGACACCTCGCGGGCGACGAAATTCAACCATGCCGTGATTTCGAAGAATATCGAGTCCAGGTTCCGCTCCTCCTGGCGGG ACACGGCGATGGAGAGGTTCGCCGAGGTCTGCGTGTATCTCCAGGAGCGGATCAGGAAGACTCGAGTCGCCAAGTCAAAC TCGGTGAAAGGGCACCGATCATTCTCAACATTCGAAGATTACACACGAGAGACCAAGCGCGCGCCATAG
Upstream 100 bases:
>100_bases CCGTATCGTGCTGAGGCTGTTTCCCGACATTTTTGCGCGACGCGCCATCGACGCGGACAACGCGTCGGCGTCTTGAACAC AGCATGAATGGGAGAGCATA
Downstream 100 bases:
>100_bases GAGGGCTTTCCAAGCTTGGCTCTGACCTGAGCCCCAGAACCTCCTCCAGATTTGGGTAGAGTCCGTCGATCACGGAGACG GACGATGCGAGCCTCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPGPSEKTIRRLFAMSGNMCTFPGCSSRIFEATGTVTGEVCHIRAQSSGGPRFDSTQTEDARHAFANLILLCRRHHKIID AEPGLYSVDTLEEIKTIQEEHLGRPKQETDGFFAKVLLNAMSRIETRNNTGNVVIGSLGAIVAGTLNFKGSGKAPRFQTA AGTIGADQEASRYVQYLIRQYNQFASADTSRATKFNHAVISKNIESRFRSSWRDTAMERFAEVCVYLQERIRKTRVAKSN SVKGHRSFSTFEDYTRETKRAP
Sequences:
>Translated_262_residues MPGPSEKTIRRLFAMSGNMCTFPGCSSRIFEATGTVTGEVCHIRAQSSGGPRFDSTQTEDARHAFANLILLCRRHHKIID AEPGLYSVDTLEEIKTIQEEHLGRPKQETDGFFAKVLLNAMSRIETRNNTGNVVIGSLGAIVAGTLNFKGSGKAPRFQTA AGTIGADQEASRYVQYLIRQYNQFASADTSRATKFNHAVISKNIESRFRSSWRDTAMERFAEVCVYLQERIRKTRVAKSN SVKGHRSFSTFEDYTRETKRAP >Mature_261_residues PGPSEKTIRRLFAMSGNMCTFPGCSSRIFEATGTVTGEVCHIRAQSSGGPRFDSTQTEDARHAFANLILLCRRHHKIIDA EPGLYSVDTLEEIKTIQEEHLGRPKQETDGFFAKVLLNAMSRIETRNNTGNVVIGSLGAIVAGTLNFKGSGKAPRFQTAA GTIGADQEASRYVQYLIRQYNQFASADTSRATKFNHAVISKNIESRFRSSWRDTAMERFAEVCVYLQERIRKTRVAKSNS VKGHRSFSTFEDYTRETKRAP
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29267; Mature: 29136
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPSEKTIRRLFAMSGNMCTFPGCSSRIFEATGTVTGEVCHIRAQSSGGPRFDSTQTED CCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHH ARHAFANLILLCRRHHKIIDAEPGLYSVDTLEEIKTIQEEHLGRPKQETDGFFAKVLLNA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MSRIETRNNTGNVVIGSLGAIVAGTLNFKGSGKAPRFQTAAGTIGADQEASRYVQYLIRQ HHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH YNQFASADTSRATKFNHAVISKNIESRFRSSWRDTAMERFAEVCVYLQERIRKTRVAKSN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVKGHRSFSTFEDYTRETKRAP CCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PGPSEKTIRRLFAMSGNMCTFPGCSSRIFEATGTVTGEVCHIRAQSSGGPRFDSTQTED CCCHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHH ARHAFANLILLCRRHHKIIDAEPGLYSVDTLEEIKTIQEEHLGRPKQETDGFFAKVLLNA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MSRIETRNNTGNVVIGSLGAIVAGTLNFKGSGKAPRFQTAAGTIGADQEASRYVQYLIRQ HHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH YNQFASADTSRATKFNHAVISKNIESRFRSSWRDTAMERFAEVCVYLQERIRKTRVAKSN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVKGHRSFSTFEDYTRETKRAP CCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA