Click here to switch to the map view.

The map label for this gene is zntR [H]

Identifier: 154247902

GI number: 154247902

Start: 4405898

End: 4406422

Strand: Direct

Name: zntR [H]

Synonym: Xaut_3979

Alternate gene names: 154247902

Gene position: 4405898-4406422 (Clockwise)

Preceding gene: 154247892

Following gene: 154247903

Centisome position: 82.99

GC content: 64.76

Gene sequence:

>525_bases
ATGTCCGGTCCATCATCCGAAAATTCTCCCGACCTCCTGCCCATCGGCGCGGCGGCGCGTGCCAGCGGGGTGAAGGTGCC
CACCATCCGCTTCTATGAAGAGATCGGCCTGATGCCCGCGCTGCCGCGCACCGAGGGCAACCGCCGCCTCTACAGCGCCA
CGCACCTGCGGAGGCTGGCCTTCATCCGCCACGCGCGTGAACTCGGTTTCGACATCGAGGCCATCCGTACCCTTCTGACG
CTCCAGGACCGGCCCGAGCAGTCGTGCGCGGCGGCGGACGAGATCGCCAGCGCGCGGCTGATCGAGGTGCGCAGCCGCAT
CGCCGCGCTCAGGGCGCTGGAAGCAGAACTTCAGCGCATGGTGGACGGCTGCGCCCATGGCCACGTGGCACAGTGCAGGG
TCATCGAGACGCTTTCCGATCACGGACAATGTCAATTTCATAACGGCCAGGGCGAAAACCTTGGGATCGGCCGAAATTCA
AGCGATCTCCCAAGCTTTTCGGGTACGATGACGCAGCGCTTCTAA

Upstream 100 bases:

>100_bases
GCGGAACCGGCTTTGAACGAGGGGAGCGGTCATGATGCGGCCTTTCTTTGCGTCAGCCTGCATAACCTAGATACTCTAGT
CACTAGAGGAGCAAGCCCCG

Downstream 100 bases:

>100_bases
AAGACTTGACACATCGCGGCTCTTGGGGTCTCTCATGGCCCATGCTTCGCGTCTTGGCAAAAGTCCTCATGTTGATCACC
GGTTCGGCGTTCCGCCGCGC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Zn(II)-responsive regulator of zntA [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSGPSSENSPDLLPIGAAARASGVKVPTIRFYEEIGLMPALPRTEGNRRLYSATHLRRLAFIRHARELGFDIEAIRTLLT
LQDRPEQSCAAADEIASARLIEVRSRIAALRALEAELQRMVDGCAHGHVAQCRVIETLSDHGQCQFHNGQGENLGIGRNS
SDLPSFSGTMTQRF

Sequences:

>Translated_174_residues
MSGPSSENSPDLLPIGAAARASGVKVPTIRFYEEIGLMPALPRTEGNRRLYSATHLRRLAFIRHARELGFDIEAIRTLLT
LQDRPEQSCAAADEIASARLIEVRSRIAALRALEAELQRMVDGCAHGHVAQCRVIETLSDHGQCQFHNGQGENLGIGRNS
SDLPSFSGTMTQRF
>Mature_173_residues
SGPSSENSPDLLPIGAAARASGVKVPTIRFYEEIGLMPALPRTEGNRRLYSATHLRRLAFIRHARELGFDIEAIRTLLTL
QDRPEQSCAAADEIASARLIEVRSRIAALRALEAELQRMVDGCAHGHVAQCRVIETLSDHGQCQFHNGQGENLGIGRNSS
DLPSFSGTMTQRF

Specific function: Zinc-responsive transcriptional regulator of zntA [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=131, Percent_Identity=43.5114503816794, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1786695, Length=137, Percent_Identity=30.6569343065693, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- InterPro:   IPR011788 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 19065; Mature: 18934

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPSSENSPDLLPIGAAARASGVKVPTIRFYEEIGLMPALPRTEGNRRLYSATHLRRLA
CCCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FIRHARELGFDIEAIRTLLTLQDRPEQSCAAADEIASARLIEVRSRIAALRALEAELQRM
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGCAHGHVAQCRVIETLSDHGQCQFHNGQGENLGIGRNSSDLPSFSGTMTQRF
HHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGPSSENSPDLLPIGAAARASGVKVPTIRFYEEIGLMPALPRTEGNRRLYSATHLRRLA
CCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FIRHARELGFDIEAIRTLLTLQDRPEQSCAAADEIASARLIEVRSRIAALRALEAELQRM
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGCAHGHVAQCRVIETLSDHGQCQFHNGQGENLGIGRNSSDLPSFSGTMTQRF
HHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]