Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247843
Identifier: 154247843
GI number: 154247843
Start: 4339321
End: 4339776
Strand: Direct
Name: 154247843
Synonym: Xaut_3920
Alternate gene names: NA
Gene position: 4339321-4339776 (Clockwise)
Preceding gene: 154247838
Following gene: 154247848
Centisome position: 81.74
GC content: 73.9
Gene sequence:
>456_bases ATGTCTTCTCTCCTCCGGGCGAAGCTTATGGCGCTGGCCGTGGCGGCTGCGACCGTCACCGGCGCGGCGGCGCCGGGCCA GGCCGCCGCCATCGGCACGGGCGCGCTGGCGCTCGCGCCGGGCCACGCCGCCTCCGTCACCGATGTGGGCTATTGGTACG GCGGGCGCTACTATCACGGACGCTACCGCGGTCCGTATTACGGTGGCGGGTGCTGGAATTGCGGCCGGAACAATGGCGCG GCGGTGGGTGCCGGCGTCGCCCTCGGAATCCTGGGGGCTGCGGCCATCGCCGGTGCTGCCTCCGCCCCGCCTCCGACCGT CTATTATGAGGAGCCGCCGCCGGTCTATTACGAGCCGGCGCCGCGCGTCTATCTGGAGCCGGCCCCCGAGCCGCGCCCGC GCAGCTGCTGGGTCACCACCGGTCCCGGCGGCGCCGGCTACTGGTCGCCCTGCTGA
Upstream 100 bases:
>100_bases GTGCGAAGTCTCGCCGAGCCTGAGATGGAACCGGGACTGCCGGTTCCAGAGTTTATGATCTTGGGGCCTTCAGGGCCTGC GACGTTTGGGAGTTGCTGTC
Downstream 100 bases:
>100_bases GGCGAGAGGGCTTTCTCGGCAAGATGGACAAGGGCGGCTTCGGCCGCCCTTTTGCTTTTGCGCCGATGCTTTGCGCCGGC CGTTCAGGCCAGGAGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSSLLRAKLMALAVAAATVTGAAAPGQAAAIGTGALALAPGHAASVTDVGYWYGGRYYHGRYRGPYYGGGCWNCGRNNGA AVGAGVALGILGAAAIAGAASAPPPTVYYEEPPPVYYEPAPRVYLEPAPEPRPRSCWVTTGPGGAGYWSPC
Sequences:
>Translated_151_residues MSSLLRAKLMALAVAAATVTGAAAPGQAAAIGTGALALAPGHAASVTDVGYWYGGRYYHGRYRGPYYGGGCWNCGRNNGA AVGAGVALGILGAAAIAGAASAPPPTVYYEEPPPVYYEPAPRVYLEPAPEPRPRSCWVTTGPGGAGYWSPC >Mature_150_residues SSLLRAKLMALAVAAATVTGAAAPGQAAAIGTGALALAPGHAASVTDVGYWYGGRYYHGRYRGPYYGGGCWNCGRNNGAA VGAGVALGILGAAAIAGAASAPPPTVYYEEPPPVYYEPAPRVYLEPAPEPRPRSCWVTTGPGGAGYWSPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15245; Mature: 15114
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLRAKLMALAVAAATVTGAAAPGQAAAIGTGALALAPGHAASVTDVGYWYGGRYYHG CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCCCCEECCCEEECC RYRGPYYGGGCWNCGRNNGAAVGAGVALGILGAAAIAGAASAPPPTVYYEEPPPVYYEPA CCCCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCC PRVYLEPAPEPRPRSCWVTTGPGGAGYWSPC CEEEECCCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SSLLRAKLMALAVAAATVTGAAAPGQAAAIGTGALALAPGHAASVTDVGYWYGGRYYHG CHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCCCCEECCCEEECC RYRGPYYGGGCWNCGRNNGAAVGAGVALGILGAAAIAGAASAPPPTVYYEEPPPVYYEPA CCCCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCC PRVYLEPAPEPRPRSCWVTTGPGGAGYWSPC CEEEECCCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA