Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247836
Identifier: 154247836
GI number: 154247836
Start: 4330327
End: 4331499
Strand: Direct
Name: 154247836
Synonym: Xaut_3913
Alternate gene names: NA
Gene position: 4330327-4331499 (Clockwise)
Preceding gene: 154247834
Following gene: 154247838
Centisome position: 81.57
GC content: 63.68
Gene sequence:
>1173_bases ATGCGTTTGTTCCGCTGTGCCGTTTGCGACCAGCTTCTCTATTTTGAGAATCGCCGCTGCGAAAAGTGCGGTCACGAACT CGGCTATGTCCCGGAGGCCAACGAGATCACCCCCCTGGAAGCCGATGGCGATGCTTATCGGTCGGTCGGCCATATCGACG CTCGCTACAAGTTCTGCGCCAATGCGGCCCATGATGCCTGCAACTGGCTGATGCCGGCGGATCAGGACGAGGAATATTGC CTCGCCTGCCGCCACAACCGCACGGTGCCGGATCTGACGGTGCCGGAAAACCTGCGCAAATGGCGCAAGATGGAAATGGC CAAGCACCGGCTGGTCTATTCGCTGCTGCGCCTCAACCTGCCGCTGGAGAACAACAAGGATCGCGAGGGCGGGCTGTGCT TCGACTTCCTCGCCGACATGCCGGACGCGCAGGCCCCCAATGTGATGACCGGGCATGATGAGGGCCTGATCACCATCGCC CTCGTCGAGGCCGACGATGCCGAGCGGGAGCAGCGCAAGAACGAGCTGGGCGAGCTCTACCGCACCGTGCTGGGGCATTT CCGCCACGAGGTGGGTCATTATTACTGGAACCGCCTGGTGCGAGACGCCGGCCGGCTCAACGCTTTTCGCGCCGTGTTCG GAGACGAGACAGCCGATTACGGGGAGGCGCTGAAGACCTATTACGGCACCACGCCTCCGGCCGACTGGCAGATGAATTAT GTCTCGGCCTATGCCACCGCGCATCCGTGGGAAGACTTTGCCGAGACCTTCAAGCATTACATCCACATCGTGGACACGCT GGAAATGGCGGCGGCGTTCGGCGTGGAAGTCCATCCCGGCCTGGATAACACCGGGGAGCTGGGCGCCCAGGTGGATTTCA ACCCCTACCAGGCCTGCCCGGTGCAGCAGATGGTGGATTCCTGGCTGCCCATCGCCTTCGCCCTCAACAATCTCAACCGC TGCCTCGGCATGTCGGATGCCTATCCGTTCATCCTCGGCCCCGGCGTGATCGCGAAGCTGGGCTTCATCCATAACCTGGC CCACCGCCAGGTGGCGGCGGACCCTGCTGCCGACCCGGCGGCACCCGTTCCGGAAGATATGGAGATCCCGAAGGGGCGCG GCGAGAGCGCCGAGGATGCGCCCGAGGGCAAGCCGGCGCCTGCGGCGGCGTAA
Upstream 100 bases:
>100_bases CGGTGCGGAATGGGAACCTCCCACGCCTCAGGGGGTTCTCAGGGCGCCGGCCGCACAGAACGTGTGCCCGAAGCACAGTG ACCGCCCCTGGGAGATAAAG
Downstream 100 bases:
>100_bases CCAATCGGTAGCCAGGGGGAGGGTGCAACGGCCCTCCGCCTGATGAGAAGAAAGGGCGAGTGCGCCAGAGCCCGGTGCAC TCGCCCTTTCTATTTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MRLFRCAVCDQLLYFENRRCEKCGHELGYVPEANEITPLEADGDAYRSVGHIDARYKFCANAAHDACNWLMPADQDEEYC LACRHNRTVPDLTVPENLRKWRKMEMAKHRLVYSLLRLNLPLENNKDREGGLCFDFLADMPDAQAPNVMTGHDEGLITIA LVEADDAEREQRKNELGELYRTVLGHFRHEVGHYYWNRLVRDAGRLNAFRAVFGDETADYGEALKTYYGTTPPADWQMNY VSAYATAHPWEDFAETFKHYIHIVDTLEMAAAFGVEVHPGLDNTGELGAQVDFNPYQACPVQQMVDSWLPIAFALNNLNR CLGMSDAYPFILGPGVIAKLGFIHNLAHRQVAADPAADPAAPVPEDMEIPKGRGESAEDAPEGKPAPAAA
Sequences:
>Translated_390_residues MRLFRCAVCDQLLYFENRRCEKCGHELGYVPEANEITPLEADGDAYRSVGHIDARYKFCANAAHDACNWLMPADQDEEYC LACRHNRTVPDLTVPENLRKWRKMEMAKHRLVYSLLRLNLPLENNKDREGGLCFDFLADMPDAQAPNVMTGHDEGLITIA LVEADDAEREQRKNELGELYRTVLGHFRHEVGHYYWNRLVRDAGRLNAFRAVFGDETADYGEALKTYYGTTPPADWQMNY VSAYATAHPWEDFAETFKHYIHIVDTLEMAAAFGVEVHPGLDNTGELGAQVDFNPYQACPVQQMVDSWLPIAFALNNLNR CLGMSDAYPFILGPGVIAKLGFIHNLAHRQVAADPAADPAAPVPEDMEIPKGRGESAEDAPEGKPAPAAA >Mature_390_residues MRLFRCAVCDQLLYFENRRCEKCGHELGYVPEANEITPLEADGDAYRSVGHIDARYKFCANAAHDACNWLMPADQDEEYC LACRHNRTVPDLTVPENLRKWRKMEMAKHRLVYSLLRLNLPLENNKDREGGLCFDFLADMPDAQAPNVMTGHDEGLITIA LVEADDAEREQRKNELGELYRTVLGHFRHEVGHYYWNRLVRDAGRLNAFRAVFGDETADYGEALKTYYGTTPPADWQMNY VSAYATAHPWEDFAETFKHYIHIVDTLEMAAAFGVEVHPGLDNTGELGAQVDFNPYQACPVQQMVDSWLPIAFALNNLNR CLGMSDAYPFILGPGVIAKLGFIHNLAHRQVAADPAADPAAPVPEDMEIPKGRGESAEDAPEGKPAPAAA
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 43732; Mature: 43732
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFRCAVCDQLLYFENRRCEKCGHELGYVPEANEITPLEADGDAYRSVGHIDARYKFCA CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH NAAHDACNWLMPADQDEEYCLACRHNRTVPDLTVPENLRKWRKMEMAKHRLVYSLLRLNL HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PLENNKDREGGLCFDFLADMPDAQAPNVMTGHDEGLITIALVEADDAEREQRKNELGELY CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHH RTVLGHFRHEVGHYYWNRLVRDAGRLNAFRAVFGDETADYGEALKTYYGTTPPADWQMNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHH VSAYATAHPWEDFAETFKHYIHIVDTLEMAAAFGVEVHPGLDNTGELGAQVDFNPYQACP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEECCCCCCCCC VQQMVDSWLPIAFALNNLNRCLGMSDAYPFILGPGVIAKLGFIHNLAHRQVAADPAADPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCC APVPEDMEIPKGRGESAEDAPEGKPAPAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLFRCAVCDQLLYFENRRCEKCGHELGYVPEANEITPLEADGDAYRSVGHIDARYKFCA CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH NAAHDACNWLMPADQDEEYCLACRHNRTVPDLTVPENLRKWRKMEMAKHRLVYSLLRLNL HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PLENNKDREGGLCFDFLADMPDAQAPNVMTGHDEGLITIALVEADDAEREQRKNELGELY CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHH RTVLGHFRHEVGHYYWNRLVRDAGRLNAFRAVFGDETADYGEALKTYYGTTPPADWQMNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHH VSAYATAHPWEDFAETFKHYIHIVDTLEMAAAFGVEVHPGLDNTGELGAQVDFNPYQACP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEECCCCCCCCC VQQMVDSWLPIAFALNNLNRCLGMSDAYPFILGPGVIAKLGFIHNLAHRQVAADPAADPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCC APVPEDMEIPKGRGESAEDAPEGKPAPAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]