Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247677
Identifier: 154247677
GI number: 154247677
Start: 4156686
End: 4157693
Strand: Direct
Name: 154247677
Synonym: Xaut_3753
Alternate gene names: NA
Gene position: 4156686-4157693 (Clockwise)
Preceding gene: 154247676
Following gene: 154247679
Centisome position: 78.3
GC content: 70.34
Gene sequence:
>1008_bases ATGCCCATCAGCACCCCTGCGCGGCTTCTGGCCTCCGTCGCCTCCCTCGCCCTCATCGCCGCCACTGGCCCGGCGCTCGC CCAGAGCCAGTCGGTGGGCACCGCCGCCGCGGTCAACCCGCGCTCCACCGGCTCGGGGACGCGCACGCTGGAGCTCGGCT CCAACATCGTCCATCGCGAGCGCATCGAGACCAGCAGCACCGGCAGCGTCCAGGTCCTGTTCGTGGACAAGACCACGCTG AACATCGGCCCCAATTCCAACCTCCTGATCGACGAGTTCGTCTACGACCCCAACGCCAAGAAGGGGTCTATGGCCATTTC CCTCACCAAGGGCGCGGTGCGCTTCGTGGGCGGCAATGCCAGCCATTCGGACGGGGCGGAGGTGAAGACCCCGGTGGCCA CCATCGGCATTCGTGGCGGCGTCGCGGCCATCCTCCATCGCGACGGCGAGACCCAGGCCATCCTCCAGTTCGGCACGCTG ACCATCGTCGGGCCTTCGGGCGAGACGGTGGTGGTGCGCCGGCCCGGCTTCATGGTCACGGTCAACCGCGCCGGCATCAC CGGGCCAACCCGCGTGCCGCAGGGCCAGATCGACGCCATCATCGCCCAGACCCGCAGCCGCACCGGCCAGAACGGCGGTC GCCCCGAGCCGACGCCGGACGTGACCGGCATCGACCGCGGTTCCAGCCATCCCTGTTCCATCCCGGTGCAGGGCCAGACC ACCATGGATCTGGCCGCCGCCTCCTGCCGCTATGTGAACACCGACCTGAAGGGCGAGGCAGACCTGATCGCCCAACAGGC GGCGCAGCAGAACCAGGCGAACGTGCTCATTCCCCTCGTGCCGCAGGCGCCGTGCCCGCCCTATAGTTACAATTGCGGCG GCGGCGGTCCGGGTGGCTATTTCGCGGTGGGGCCGGTGGTGGTGCCGCAGCTGCCGCAGGGCAATCCCGGCGGCATCGGC GGCGGCATCGGTGGCTTCGGCCGCCCGCGCGGCGTCCTGGCCGACTGA
Upstream 100 bases:
>100_bases GGTCCAGTACAGCTGGTCGCAGTCGACGCTGCCGAACTACGCGTTCGACAATTTCAGCGTCACCGTCGGCCCGAACGTCC GGTTCTGAGGAGCGCCGCAC
Downstream 100 bases:
>100_bases GCGGGCATCGACCGAACCCGGCGCTGCGGCGCCAGCGGCCGCGGCCTGACCAGTGGCCGCGGGGCGCTGCCAGGGCCCGA CTGAAAACTTGCCAGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MPISTPARLLASVASLALIAATGPALAQSQSVGTAAAVNPRSTGSGTRTLELGSNIVHRERIETSSTGSVQVLFVDKTTL NIGPNSNLLIDEFVYDPNAKKGSMAISLTKGAVRFVGGNASHSDGAEVKTPVATIGIRGGVAAILHRDGETQAILQFGTL TIVGPSGETVVVRRPGFMVTVNRAGITGPTRVPQGQIDAIIAQTRSRTGQNGGRPEPTPDVTGIDRGSSHPCSIPVQGQT TMDLAAASCRYVNTDLKGEADLIAQQAAQQNQANVLIPLVPQAPCPPYSYNCGGGGPGGYFAVGPVVVPQLPQGNPGGIG GGIGGFGRPRGVLAD
Sequences:
>Translated_335_residues MPISTPARLLASVASLALIAATGPALAQSQSVGTAAAVNPRSTGSGTRTLELGSNIVHRERIETSSTGSVQVLFVDKTTL NIGPNSNLLIDEFVYDPNAKKGSMAISLTKGAVRFVGGNASHSDGAEVKTPVATIGIRGGVAAILHRDGETQAILQFGTL TIVGPSGETVVVRRPGFMVTVNRAGITGPTRVPQGQIDAIIAQTRSRTGQNGGRPEPTPDVTGIDRGSSHPCSIPVQGQT TMDLAAASCRYVNTDLKGEADLIAQQAAQQNQANVLIPLVPQAPCPPYSYNCGGGGPGGYFAVGPVVVPQLPQGNPGGIG GGIGGFGRPRGVLAD >Mature_334_residues PISTPARLLASVASLALIAATGPALAQSQSVGTAAAVNPRSTGSGTRTLELGSNIVHRERIETSSTGSVQVLFVDKTTLN IGPNSNLLIDEFVYDPNAKKGSMAISLTKGAVRFVGGNASHSDGAEVKTPVATIGIRGGVAAILHRDGETQAILQFGTLT IVGPSGETVVVRRPGFMVTVNRAGITGPTRVPQGQIDAIIAQTRSRTGQNGGRPEPTPDVTGIDRGSSHPCSIPVQGQTT MDLAAASCRYVNTDLKGEADLIAQQAAQQNQANVLIPLVPQAPCPPYSYNCGGGGPGGYFAVGPVVVPQLPQGNPGGIGG GIGGFGRPRGVLAD
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34068; Mature: 33937
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISTPARLLASVASLALIAATGPALAQSQSVGTAAAVNPRSTGSGTRTLELGSNIVHRE CCCCCHHHHHHHHHHHHEEEECCCHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHH RIETSSTGSVQVLFVDKTTLNIGPNSNLLIDEFVYDPNAKKGSMAISLTKGAVRFVGGNA HCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEECCCC SHSDGAEVKTPVATIGIRGGVAAILHRDGETQAILQFGTLTIVGPSGETVVVRRPGFMVT CCCCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEECEEEEECCCCCEEEEECCCEEEE VNRAGITGPTRVPQGQIDAIIAQTRSRTGQNGGRPEPTPDVTGIDRGSSHPCSIPVQGQT EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC TMDLAAASCRYVNTDLKGEADLIAQQAAQQNQANVLIPLVPQAPCPPYSYNCGGGGPGGY HHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC FAVGPVVVPQLPQGNPGGIGGGIGGFGRPRGVLAD EEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PISTPARLLASVASLALIAATGPALAQSQSVGTAAAVNPRSTGSGTRTLELGSNIVHRE CCCCHHHHHHHHHHHHEEEECCCHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHH RIETSSTGSVQVLFVDKTTLNIGPNSNLLIDEFVYDPNAKKGSMAISLTKGAVRFVGGNA HCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEECCCC SHSDGAEVKTPVATIGIRGGVAAILHRDGETQAILQFGTLTIVGPSGETVVVRRPGFMVT CCCCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEECEEEEECCCCCEEEEECCCEEEE VNRAGITGPTRVPQGQIDAIIAQTRSRTGQNGGRPEPTPDVTGIDRGSSHPCSIPVQGQT EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC TMDLAAASCRYVNTDLKGEADLIAQQAAQQNQANVLIPLVPQAPCPPYSYNCGGGGPGGY HHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC FAVGPVVVPQLPQGNPGGIGGGIGGFGRPRGVLAD EEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA