Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247646
Identifier: 154247646
GI number: 154247646
Start: 4124255
End: 4126579
Strand: Direct
Name: 154247646
Synonym: Xaut_3721
Alternate gene names: NA
Gene position: 4124255-4126579 (Clockwise)
Preceding gene: 154247645
Following gene: 154247647
Centisome position: 77.69
GC content: 67.18
Gene sequence:
>2325_bases ATGTCCATCATCGTGATGCAGCGCCTGGACCCGGCCGACCGTCTGTCGATGACGGCGCCGGCCGGGGCGAGCCTCGCCGA GATCGTGGGCCTGGCGCTGCCCACCGCGCCGGTGGAACATGTGCGGGTTCTGATCGGCGGCCATGTGATCGAGCGGGCCA ACTGGCACGTGGTGCGCCCCAAGCCCGGCGCCGAGGTGCTGGTGCGCCTGCTGCCCGGCAACTCGGGCGCGCTGCGGGCG GTGCTCACCATCGCGGTGGCCATCGCCGCCATCACGATCAGCGGCGGCCTGCTGGGGCCGCTCGCTCCCGGACTGCTCGC CGCCGGCACCCTTGGTGCCAGCCTTGCCGGTGCGGCGACGCTGGCAGTGGGCACGCTGCTGATCAACGCGCTGGTTCCGG TTCGGAAGGAACAGGCGGCCAGCGGCGACACCAGCCCGACCTATTCGATTTCCGGGATGCAAAATTCGCTCAACCCGGAC GGCACCGTGCCGCGCCTTCTCGGCGAAATGCGCTGGGCGCCGGTCTATGCCGCCAAGCCCTACACGGAGGCGAGCGGGAA CGACCGCTATATCATCGCCTTGTTCAACTGCGGCTACGGTCCCCTGGAGTTGCCGACCTCAGAGATGCGCATCGGCACCA CGCCCATATCCCAATATGACGGTGTGACGGTCGAGGTGCGCGAGGGCTATGCCACCGACAGCCCGGTGACGATCTACCCC AACCAGGTGTCCGAGGACGCCATCTCGATCCAGCTCCTCTACAATGAGGCGCATGTGCAGGTGACCGCGCCGGACGTGGA CCGCGCCTCCATCGACATTGCCTTTGCCCAGGGCCTTTATGCGGTCAGCAAGGGCAGCACGACAGCCAAATATACCTGGG GTGTCAATTTCCAGCTGCGCTATCGCAAGGTCGGTGCCGTTGCGTGGACATCTACGGGCTTCAACATCAGCGACAATCAT GTGCAGCCGCTGTTGCGCACATACTATTTCAGCTTTCCGGAGCGGGGGCAGTATGAAGTCGAGGTGAAGCGGGTGGACAT CAACTATGATGATTTCACCGCCGATCCCAACTTTGCTTACACCACCCGCTCGGATTGGGTCGCTCTGCGCGGATACCGGC CGGAATACCCGCTTAATTTTGGTAAGCCGCTCGCGCTCGTGGCCGTCAAGATCAAGGCGACGGACCAGCTGAACGGCACC CTCGACAGCTTTTCGGTGCTCGGGCGCAGCGTGCTCCCGGACTGGGATCGCGCGAGCGGGGCGTGGATCGCGCGGGCGAC CCGCAATCCCGCCAGCCATTTCCGCCACGTGCTCACCGGCAACGCGACGACCTATCCGGTCTCGACGGATGAGATGGAGG CAATCGAGGACTGGCACGAGTGGTGCGCGCTCAAGGGTCTCACCTATGACCGGGTCCACGACGCGGCAGGGTCCATGGCG GAGGTGCTGGCCGACATCGCCGCGGCGGGCCGGGCCTCGCCGCAGGACCGGGGCGGCCGGTGGGGCGTTGTGATCGACCG CATCATGGATGTGGTGCGCGGCCATATCTCGCCCCGCAACTCGTGGGGGTTCTCCGGCCGGCGCCCGCTGGCGCGCCTGC CCGATGCCTTCCGGATCAAGTTCCGGGATGAGACCAACGATTACGAGGAAGCCCAGCGTGTGGTGCCGCTGCCCGGCTTT TACGGCGAACCGGGGGTGGTGGAGGATTTGGCGCTGCCGGGCATCACGGATCCGGACCTGATCTATCGCGAGGCGCGCCG CCGCGGCTACGAACTGCTGCACCGCCCCGACACCTATGAGGTGCAGATGGATTGGGAGCACCTCGCCAACACCCGCGGCG ACCTGGTGCGGCTCTCCCATGACGTGCTGGACCGCACGCAGGTCTCGGCGCGGGTGCGCACCGTCAGCGGCTTCACCGTG ACCCTCGACGAGGTCGTCACCATGGAGGCGGGCAAGGCCTATGCCTGCCGCTTCCGGGCGGAGGATGGCACATCGATCCT GCGCAGCGTGCACACCGTTCCCGGTGAGACGCGAGCCATCTCGCTGACCGGCGCCGGCCCCATGCCCGCGCCGGGCGACC TCGCCATGTTCGGGCATGCGGCCGAGGAATCGCTGGAGTGCATCGTGAAGGGGGTGGAGATCGGCGACGACCTCACCGCC AAGCTGATCCTCATCGACCACGCGCCGCAGATCGAGGTCGAGACGGATGCAGAGACGCCGCCGGCCTGGAGCGGGCGCGT CGGCGCCGAGGCCGGCGTGAGCCTGATCACCCCGGCCGTGCCGGTGATCTTCGAGGTGCTCTCGGGCTCGATCATCGGCG GATAG
Upstream 100 bases:
>100_bases TGATGCTCCACGTCTCGGACGGCCACGACAGCCGGATCGAGGACTATCGCGGCGCCGTCTGGTCGCGCCGTCTGATCGCC ATCTATCGCCATGAGGCCCT
Downstream 100 bases:
>100_bases CAGCCTGCTAGCCCAAAAATCTCAAATAGTAGGTGCGATATGGCAACATTCGTAAAATTCAACAGCTTTGTCGAAGCTGT GATGAAGGAAAAGCATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protein Tail Component-Like Protein; Phage Tail Fiber Protein; Tail Fiber Protein Truncation
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MSIIVMQRLDPADRLSMTAPAGASLAEIVGLALPTAPVEHVRVLIGGHVIERANWHVVRPKPGAEVLVRLLPGNSGALRA VLTIAVAIAAITISGGLLGPLAPGLLAAGTLGASLAGAATLAVGTLLINALVPVRKEQAASGDTSPTYSISGMQNSLNPD GTVPRLLGEMRWAPVYAAKPYTEASGNDRYIIALFNCGYGPLELPTSEMRIGTTPISQYDGVTVEVREGYATDSPVTIYP NQVSEDAISIQLLYNEAHVQVTAPDVDRASIDIAFAQGLYAVSKGSTTAKYTWGVNFQLRYRKVGAVAWTSTGFNISDNH VQPLLRTYYFSFPERGQYEVEVKRVDINYDDFTADPNFAYTTRSDWVALRGYRPEYPLNFGKPLALVAVKIKATDQLNGT LDSFSVLGRSVLPDWDRASGAWIARATRNPASHFRHVLTGNATTYPVSTDEMEAIEDWHEWCALKGLTYDRVHDAAGSMA EVLADIAAAGRASPQDRGGRWGVVIDRIMDVVRGHISPRNSWGFSGRRPLARLPDAFRIKFRDETNDYEEAQRVVPLPGF YGEPGVVEDLALPGITDPDLIYREARRRGYELLHRPDTYEVQMDWEHLANTRGDLVRLSHDVLDRTQVSARVRTVSGFTV TLDEVVTMEAGKAYACRFRAEDGTSILRSVHTVPGETRAISLTGAGPMPAPGDLAMFGHAAEESLECIVKGVEIGDDLTA KLILIDHAPQIEVETDAETPPAWSGRVGAEAGVSLITPAVPVIFEVLSGSIIGG
Sequences:
>Translated_774_residues MSIIVMQRLDPADRLSMTAPAGASLAEIVGLALPTAPVEHVRVLIGGHVIERANWHVVRPKPGAEVLVRLLPGNSGALRA VLTIAVAIAAITISGGLLGPLAPGLLAAGTLGASLAGAATLAVGTLLINALVPVRKEQAASGDTSPTYSISGMQNSLNPD GTVPRLLGEMRWAPVYAAKPYTEASGNDRYIIALFNCGYGPLELPTSEMRIGTTPISQYDGVTVEVREGYATDSPVTIYP NQVSEDAISIQLLYNEAHVQVTAPDVDRASIDIAFAQGLYAVSKGSTTAKYTWGVNFQLRYRKVGAVAWTSTGFNISDNH VQPLLRTYYFSFPERGQYEVEVKRVDINYDDFTADPNFAYTTRSDWVALRGYRPEYPLNFGKPLALVAVKIKATDQLNGT LDSFSVLGRSVLPDWDRASGAWIARATRNPASHFRHVLTGNATTYPVSTDEMEAIEDWHEWCALKGLTYDRVHDAAGSMA EVLADIAAAGRASPQDRGGRWGVVIDRIMDVVRGHISPRNSWGFSGRRPLARLPDAFRIKFRDETNDYEEAQRVVPLPGF YGEPGVVEDLALPGITDPDLIYREARRRGYELLHRPDTYEVQMDWEHLANTRGDLVRLSHDVLDRTQVSARVRTVSGFTV TLDEVVTMEAGKAYACRFRAEDGTSILRSVHTVPGETRAISLTGAGPMPAPGDLAMFGHAAEESLECIVKGVEIGDDLTA KLILIDHAPQIEVETDAETPPAWSGRVGAEAGVSLITPAVPVIFEVLSGSIIGG >Mature_773_residues SIIVMQRLDPADRLSMTAPAGASLAEIVGLALPTAPVEHVRVLIGGHVIERANWHVVRPKPGAEVLVRLLPGNSGALRAV LTIAVAIAAITISGGLLGPLAPGLLAAGTLGASLAGAATLAVGTLLINALVPVRKEQAASGDTSPTYSISGMQNSLNPDG TVPRLLGEMRWAPVYAAKPYTEASGNDRYIIALFNCGYGPLELPTSEMRIGTTPISQYDGVTVEVREGYATDSPVTIYPN QVSEDAISIQLLYNEAHVQVTAPDVDRASIDIAFAQGLYAVSKGSTTAKYTWGVNFQLRYRKVGAVAWTSTGFNISDNHV QPLLRTYYFSFPERGQYEVEVKRVDINYDDFTADPNFAYTTRSDWVALRGYRPEYPLNFGKPLALVAVKIKATDQLNGTL DSFSVLGRSVLPDWDRASGAWIARATRNPASHFRHVLTGNATTYPVSTDEMEAIEDWHEWCALKGLTYDRVHDAAGSMAE VLADIAAAGRASPQDRGGRWGVVIDRIMDVVRGHISPRNSWGFSGRRPLARLPDAFRIKFRDETNDYEEAQRVVPLPGFY GEPGVVEDLALPGITDPDLIYREARRRGYELLHRPDTYEVQMDWEHLANTRGDLVRLSHDVLDRTQVSARVRTVSGFTVT LDEVVTMEAGKAYACRFRAEDGTSILRSVHTVPGETRAISLTGAGPMPAPGDLAMFGHAAEESLECIVKGVEIGDDLTAK LILIDHAPQIEVETDAETPPAWSGRVGAEAGVSLITPAVPVIFEVLSGSIIGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83689; Mature: 83557
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIVMQRLDPADRLSMTAPAGASLAEIVGLALPTAPVEHVRVLIGGHVIERANWHVVRP CEEEEEECCCCHHHCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCEEEECC KPGAEVLVRLLPGNSGALRAVLTIAVAIAAITISGGLLGPLAPGLLAAGTLGASLAGAAT CCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHCHHHHHHHH LAVGTLLINALVPVRKEQAASGDTSPTYSISGMQNSLNPDGTVPRLLGEMRWAPVYAAKP HHHHHHHHHHHCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC YTEASGNDRYIIALFNCGYGPLELPTSEMRIGTTPISQYDGVTVEVREGYATDSPVTIYP CCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHCCCEEEEEECCCCCCCCEEECC NQVSEDAISIQLLYNEAHVQVTAPDVDRASIDIAFAQGLYAVSKGSTTAKYTWGVNFQLR CCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEE YRKVGAVAWTSTGFNISDNHVQPLLRTYYFSFPERGQYEVEVKRVDINYDDFTADPNFAY EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEE TTRSDWVALRGYRPEYPLNFGKPLALVAVKIKATDQLNGTLDSFSVLGRSVLPDWDRASG EECCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC AWIARATRNPASHFRHVLTGNATTYPVSTDEMEAIEDWHEWCALKGLTYDRVHDAAGSMA CEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHH EVLADIAAAGRASPQDRGGRWGVVIDRIMDVVRGHISPRNSWGFSGRRPLARLPDAFRIK HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEE FRDETNDYEEAQRVVPLPGFYGEPGVVEDLALPGITDPDLIYREARRRGYELLHRPDTYE ECCCCCCHHHHHEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEE VQMDWEHLANTRGDLVRLSHDVLDRTQVSARVRTVSGFTVTLDEVVTMEAGKAYACRFRA EEECHHHHCCCCCCEEEHHHHHHHHHHHHHEEEEECCEEEEHHHEEEECCCCEEEEEEEC EDGTSILRSVHTVPGETRAISLTGAGPMPAPGDLAMFGHAAEESLECIVKGVEIGDDLTA CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCEE KLILIDHAPQIEVETDAETPPAWSGRVGAEAGVSLITPAVPVIFEVLSGSIIGG EEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SIIVMQRLDPADRLSMTAPAGASLAEIVGLALPTAPVEHVRVLIGGHVIERANWHVVRP EEEEEECCCCHHHCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCEEEECC KPGAEVLVRLLPGNSGALRAVLTIAVAIAAITISGGLLGPLAPGLLAAGTLGASLAGAAT CCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHCHHHHHHHH LAVGTLLINALVPVRKEQAASGDTSPTYSISGMQNSLNPDGTVPRLLGEMRWAPVYAAKP HHHHHHHHHHHCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC YTEASGNDRYIIALFNCGYGPLELPTSEMRIGTTPISQYDGVTVEVREGYATDSPVTIYP CCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHCCCEEEEEECCCCCCCCEEECC NQVSEDAISIQLLYNEAHVQVTAPDVDRASIDIAFAQGLYAVSKGSTTAKYTWGVNFQLR CCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEE YRKVGAVAWTSTGFNISDNHVQPLLRTYYFSFPERGQYEVEVKRVDINYDDFTADPNFAY EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEE TTRSDWVALRGYRPEYPLNFGKPLALVAVKIKATDQLNGTLDSFSVLGRSVLPDWDRASG EECCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC AWIARATRNPASHFRHVLTGNATTYPVSTDEMEAIEDWHEWCALKGLTYDRVHDAAGSMA CEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHH EVLADIAAAGRASPQDRGGRWGVVIDRIMDVVRGHISPRNSWGFSGRRPLARLPDAFRIK HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEE FRDETNDYEEAQRVVPLPGFYGEPGVVEDLALPGITDPDLIYREARRRGYELLHRPDTYE ECCCCCCHHHHHEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEE VQMDWEHLANTRGDLVRLSHDVLDRTQVSARVRTVSGFTVTLDEVVTMEAGKAYACRFRA EEECHHHHCCCCCCEEEHHHHHHHHHHHHHEEEEECCEEEEHHHEEEECCCCEEEEEEEC EDGTSILRSVHTVPGETRAISLTGAGPMPAPGDLAMFGHAAEESLECIVKGVEIGDDLTA CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCEE KLILIDHAPQIEVETDAETPPAWSGRVGAEAGVSLITPAVPVIFEVLSGSIIGG EEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA