Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247576
Identifier: 154247576
GI number: 154247576
Start: 4067108
End: 4067770
Strand: Direct
Name: 154247576
Synonym: Xaut_3649
Alternate gene names: NA
Gene position: 4067108-4067770 (Clockwise)
Preceding gene: 154247575
Following gene: 154247577
Centisome position: 76.61
GC content: 57.47
Gene sequence:
>663_bases ATGGATACCAGATCACGGTACGAGGACCTTCGCGAGGCTATTGAGACAACAGTTGAAAACCGCCTTGTTGAGCTGCGTAC AGCAGAACATGCGACGGTCGTCTCGTGGGACCCCGTAAAACAGACGATGGTCGCCCAGCCCACCAATAAGGCGCTCATTC GGAAGCCAGATGGGACCAAGGAATGGGTGCAGATGCCCCAGATTCCGGACGTGAAGATACATTATCCATCGGGCAACGGC ATTACCGTCACGCACCCTCTCAAGGAGGGAGACGAGGTTCTTCTTATTATGGCGTCCCGCTCTCCGGATGTCTGGCAGCA GAGCGGCGGCGACCAGCAGATCATCGATACCCGGCTTCATGACCTATCCAACGCCTTCTGCATCCCGGGGTTCAAGTCGG ACGCCAAGGCTCTGGAAAATGTCTCGCCGGACTCCACCCAGATCCGTTCCGACGACGGGCAGACGGTAATCGACATTAAG GGTGGGTCGGTCGCTCTAAAGGCGCAGAATACTGAAGTTCAGGTTACGAACGACGCCGCGACCATGAAGAAGGGCGATAT GAAGATCATCGTCTCCTCCTCCCGCGTCGATCTTGGGGGCACTGGAGGTCAGGCCGTCATGACTGAGGGCGGCCCGTCCA CCAAAGTGTTCGCGGTGATCTGA
Upstream 100 bases:
>100_bases CGGAGTTCTACACAGACGTTCTGTGCCGTTCCTATGCCCATGGGACTTCTCCTGCTGCTGGCGCGCGCGGGCTCGGCGAC CCCTCCGGGAGCAACTGAAC
Downstream 100 bases:
>100_bases TGCGTTACCGGAAACTTGACGTAAACGGCGACATGATGTTTGGCCGGGGGCAGGCTGATTTCTATCGAGATGTCCCCGAA GCCCCTGCGCAGGCCGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Phage Protein
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MDTRSRYEDLREAIETTVENRLVELRTAEHATVVSWDPVKQTMVAQPTNKALIRKPDGTKEWVQMPQIPDVKIHYPSGNG ITVTHPLKEGDEVLLIMASRSPDVWQQSGGDQQIIDTRLHDLSNAFCIPGFKSDAKALENVSPDSTQIRSDDGQTVIDIK GGSVALKAQNTEVQVTNDAATMKKGDMKIIVSSSRVDLGGTGGQAVMTEGGPSTKVFAVI
Sequences:
>Translated_220_residues MDTRSRYEDLREAIETTVENRLVELRTAEHATVVSWDPVKQTMVAQPTNKALIRKPDGTKEWVQMPQIPDVKIHYPSGNG ITVTHPLKEGDEVLLIMASRSPDVWQQSGGDQQIIDTRLHDLSNAFCIPGFKSDAKALENVSPDSTQIRSDDGQTVIDIK GGSVALKAQNTEVQVTNDAATMKKGDMKIIVSSSRVDLGGTGGQAVMTEGGPSTKVFAVI >Mature_220_residues MDTRSRYEDLREAIETTVENRLVELRTAEHATVVSWDPVKQTMVAQPTNKALIRKPDGTKEWVQMPQIPDVKIHYPSGNG ITVTHPLKEGDEVLLIMASRSPDVWQQSGGDQQIIDTRLHDLSNAFCIPGFKSDAKALENVSPDSTQIRSDDGQTVIDIK GGSVALKAQNTEVQVTNDAATMKKGDMKIIVSSSRVDLGGTGGQAVMTEGGPSTKVFAVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23912; Mature: 23912
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRSRYEDLREAIETTVENRLVELRTAEHATVVSWDPVKQTMVAQPTNKALIRKPDGTK CCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCHHHHEECCCCCCEEEECCCCCH EWVQMPQIPDVKIHYPSGNGITVTHPLKEGDEVLLIMASRSPDVWQQSGGDQQIIDTRLH HHHCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHH DLSNAFCIPGFKSDAKALENVSPDSTQIRSDDGQTVIDIKGGSVALKAQNTEVQVTNDAA HCCCCEECCCCCCHHHHHHCCCCCCCEEECCCCCEEEEECCCEEEEEECCCEEEEECCHH TMKKGDMKIIVSSSRVDLGGTGGQAVMTEGGPSTKVFAVI HEECCCEEEEEECCEEEECCCCCCEEEECCCCCCEEEEEC >Mature Secondary Structure MDTRSRYEDLREAIETTVENRLVELRTAEHATVVSWDPVKQTMVAQPTNKALIRKPDGTK CCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCHHHHEECCCCCCEEEECCCCCH EWVQMPQIPDVKIHYPSGNGITVTHPLKEGDEVLLIMASRSPDVWQQSGGDQQIIDTRLH HHHCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHH DLSNAFCIPGFKSDAKALENVSPDSTQIRSDDGQTVIDIKGGSVALKAQNTEVQVTNDAA HCCCCEECCCCCCHHHHHHCCCCCCCEEECCCCCEEEEECCCEEEEEECCCEEEEECCHH TMKKGDMKIIVSSSRVDLGGTGGQAVMTEGGPSTKVFAVI HEECCCEEEEEECCEEEECCCCCCEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA