Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247557
Identifier: 154247557
GI number: 154247557
Start: 4049229
End: 4050005
Strand: Direct
Name: 154247557
Synonym: Xaut_3630
Alternate gene names: NA
Gene position: 4049229-4050005 (Clockwise)
Preceding gene: 154247556
Following gene: 154247558
Centisome position: 76.27
GC content: 63.58
Gene sequence:
>777_bases ATGAGCGCGGTCCTTAAGCTCTTCGACAAGGACCCATCTCCTCGGCGGGCCTACAAATCGGCTCGGAAGGTTGAGCGCCA ATATACTGCTTCCCTGCGTAGGGTGGCGCGGCACATCGGCGAGATTGTCTCGGGCCTGAGCCCAGACGGGGAAACCACCC CGGAGGTTGCCAGCGCCATCGACATGGCATTGGAGCGCTATGCCCAGGTGCTTCAGCCATGGGCCGGGGCCGTTGCGAAC CGGATGATTACGGAAGTCGCGGCGCGTGATGAGGCGACGTGGTTCGATGTGTCCCGGAAGATGGGGCGAGCGCTCCGCAA GGAGATTGAGACGGCCCCCACGGGCAAGATCATGCGCGAGCGGCTACTTGATCAGGTGCAGCTTATCACGTCTCTACCGC GGGAGGCAGCGGAGCGGGTTCGGACGCTCGCGAATGAAGCCATCGTACAGGGCACCCGTCCTGCCGAGCTGGCGAAGGAA ATCCTGCGGACTGGAGAGGTGACGGAATCCCGCGCCATCCTGATCGCGAGAACAGAGACAAGCCGGACGGCAACCGAGCT GACGCGGGCCAGGGCCGAGCATGTGGGGTCGCCGGGATATTGGTGGCGGACCTCAGAAGACACCGATGTGCGGGACGACC ATAAGATCCTGAACGGCACGTTTGTTGAATGGTCGAAGCCCCCGATAGCGGATCGGAGAACAGGCGCCCGCGCGCACGCG GGGTGCATATATCGGTGCCGGTGCTGGCCCGAAGTGGTTATCGCTGAAGGCGCCTGA
Upstream 100 bases:
>100_bases AAATCACCGAGGCGGAGAACGAGCCGCCGCCGCTCCCTGAGATGCCCCTCGCTCCTTTGGGGGCAGAGAGCAATAAGGAG GGCGCGGGCGAGGTTCTGCC
Downstream 100 bases:
>100_bases TCTGCATTAAAAGATCTTCGATGCAGTCGGCAGCTTCCCATTCGAGCATGTCTTCTGGTGACCATATCCTAGCCACGCCG ATCTTAACAGCGGATGGCGA
Product: SPP1 family phage head morphogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVAN RMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKE ILRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA GCIYRCRCWPEVVIAEGA
Sequences:
>Translated_258_residues MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVAN RMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKE ILRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA GCIYRCRCWPEVVIAEGA >Mature_257_residues SAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVANR MITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEI LRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHAG CIYRCRCWPEVVIAEGA
Specific function: Unknown
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli plasmid IncP-alpha RP4 protein traN [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 28906; Mature: 28775
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAI CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH DMALERYAQVLQPWAGAVANRMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEILRTGEVTESRAILIARTET HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC SRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHH GCIYRCRCWPEVVIAEGA CCEEEEECCCEEEEECCC >Mature Secondary Structure SAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAI CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH DMALERYAQVLQPWAGAVANRMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEILRTGEVTESRAILIARTET HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC SRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHH GCIYRCRCWPEVVIAEGA CCEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]