Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154247557

Identifier: 154247557

GI number: 154247557

Start: 4049229

End: 4050005

Strand: Direct

Name: 154247557

Synonym: Xaut_3630

Alternate gene names: NA

Gene position: 4049229-4050005 (Clockwise)

Preceding gene: 154247556

Following gene: 154247558

Centisome position: 76.27

GC content: 63.58

Gene sequence:

>777_bases
ATGAGCGCGGTCCTTAAGCTCTTCGACAAGGACCCATCTCCTCGGCGGGCCTACAAATCGGCTCGGAAGGTTGAGCGCCA
ATATACTGCTTCCCTGCGTAGGGTGGCGCGGCACATCGGCGAGATTGTCTCGGGCCTGAGCCCAGACGGGGAAACCACCC
CGGAGGTTGCCAGCGCCATCGACATGGCATTGGAGCGCTATGCCCAGGTGCTTCAGCCATGGGCCGGGGCCGTTGCGAAC
CGGATGATTACGGAAGTCGCGGCGCGTGATGAGGCGACGTGGTTCGATGTGTCCCGGAAGATGGGGCGAGCGCTCCGCAA
GGAGATTGAGACGGCCCCCACGGGCAAGATCATGCGCGAGCGGCTACTTGATCAGGTGCAGCTTATCACGTCTCTACCGC
GGGAGGCAGCGGAGCGGGTTCGGACGCTCGCGAATGAAGCCATCGTACAGGGCACCCGTCCTGCCGAGCTGGCGAAGGAA
ATCCTGCGGACTGGAGAGGTGACGGAATCCCGCGCCATCCTGATCGCGAGAACAGAGACAAGCCGGACGGCAACCGAGCT
GACGCGGGCCAGGGCCGAGCATGTGGGGTCGCCGGGATATTGGTGGCGGACCTCAGAAGACACCGATGTGCGGGACGACC
ATAAGATCCTGAACGGCACGTTTGTTGAATGGTCGAAGCCCCCGATAGCGGATCGGAGAACAGGCGCCCGCGCGCACGCG
GGGTGCATATATCGGTGCCGGTGCTGGCCCGAAGTGGTTATCGCTGAAGGCGCCTGA

Upstream 100 bases:

>100_bases
AAATCACCGAGGCGGAGAACGAGCCGCCGCCGCTCCCTGAGATGCCCCTCGCTCCTTTGGGGGCAGAGAGCAATAAGGAG
GGCGCGGGCGAGGTTCTGCC

Downstream 100 bases:

>100_bases
TCTGCATTAAAAGATCTTCGATGCAGTCGGCAGCTTCCCATTCGAGCATGTCTTCTGGTGACCATATCCTAGCCACGCCG
ATCTTAACAGCGGATGGCGA

Product: SPP1 family phage head morphogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVAN
RMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKE
ILRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA
GCIYRCRCWPEVVIAEGA

Sequences:

>Translated_258_residues
MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVAN
RMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKE
ILRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA
GCIYRCRCWPEVVIAEGA
>Mature_257_residues
SAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAIDMALERYAQVLQPWAGAVANR
MITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRERLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEI
LRTGEVTESRAILIARTETSRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHAG
CIYRCRCWPEVVIAEGA

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli plasmid IncP-alpha RP4 protein traN [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006528 [H]

Pfam domain/function: PF04233 Phage_Mu_F [H]

EC number: NA

Molecular weight: Translated: 28906; Mature: 28775

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAI
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DMALERYAQVLQPWAGAVANRMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEILRTGEVTESRAILIARTET
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
SRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHH
GCIYRCRCWPEVVIAEGA
CCEEEEECCCEEEEECCC
>Mature Secondary Structure 
SAVLKLFDKDPSPRRAYKSARKVERQYTASLRRVARHIGEIVSGLSPDGETTPEVASAI
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DMALERYAQVLQPWAGAVANRMITEVAARDEATWFDVSRKMGRALRKEIETAPTGKIMRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RLLDQVQLITSLPREAAERVRTLANEAIVQGTRPAELAKEILRTGEVTESRAILIARTET
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
SRTATELTRARAEHVGSPGYWWRTSEDTDVRDDHKILNGTFVEWSKPPIADRRTGARAHA
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHH
GCIYRCRCWPEVVIAEGA
CCEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]