Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247555
Identifier: 154247555
GI number: 154247555
Start: 4045709
End: 4047781
Strand: Direct
Name: 154247555
Synonym: Xaut_3628
Alternate gene names: NA
Gene position: 4045709-4047781 (Clockwise)
Preceding gene: 154247554
Following gene: 154247556
Centisome position: 76.21
GC content: 60.11
Gene sequence:
>2073_bases ATGATGGGCCTATCCAGATCCTCGTCTACCCTGAGGACCGCTCCGTTTGAACTAACAGGCCGCCAGAGGGAAGCCCTTCG GCTCCTTGGAGGCCCGCAGCGGCATACGATGCTTGCGGGTGGCGCGAGGTCGGGCAAGACGTTCCTTCTTACGCGTGGCG TTGTCGTTAGGGCGCTGAAGGCTCCAGAGAGCCGGCACGCTATCCTGAGGTTCAGGGCAAACGCAGTTCGGTCGTCTGTA GCGCTGGACACACTGCCTAAGGTCACCAGCCTGTGCTTCCCTGGCCTGAAGCTTGTCGAGCACCGGCAGGATGGGTTCTT TGAGCTTCCGAACGGCTCTCAGATCTGGCTAGGTGGTCTGGACGACAAGGAGCGGGTTGAAAAGATCCTCGGGCAGGAAT ATTGCTTGGACCCAGAATCCCTCGTTCTCGCGGCTGACCTGCGTTGGGTCCCGGCGCACACTCTCAATGTCGGCGATCAG ATCGTTGGGTTCCCGGAAGACCTGCGCGGAAACCAGACGCTGGAGCGCTCCAGCGTTGAGCGCACCGAGATTATAGAGGC GCATAAATATCGGGTCGTCACGGATCGTGGGGAGACGATTGTCTCGGCGCAGCACAAATTCGTCTACGGCAAGCCCCGCA CGCACAACCGCTTGCGATGGGTCGACGCGCAAAACTTAAAACCGGGTGACTGGATCAAGTTTGCCGCGTCGCCTTGGGCT GAGAAAAAGGATTACACCGGCGGGTGGCTAGCGGGCATTTATGACGGTGAAGGGTGCATCTCCCAGACGGACACTTACAC CCACTGTCAGGTTGCCCAGAAGCCTGGCCTTGTCCTCGACGCCATTCGAGAAGGTCTTGCGGAAATTGGCGTGATCGCCA ATGAGTCGCCGCAATCGGCCAGCGGCGTAGTCAACCTGCATTGTGCTGGCATGTGGCAGGCTATGCGGCTGCTTGGCATG GTCCGCCCACGCCGGCTGATGCCAAAATCTGCTAAGGTTTGGGAGGGACGGCGGGCATTCAACACGCGCGGCGACCACCA TTATGCGAAGGTCGTGTCGGTGGAGTACATTGGCCGTGGACCGGTCGTGTCGCTCGGCACCAGCACCAAAACGCTGATTG CTGACGGGTTCTTGGGCCATAATTGCACCCTCTATTTTAACGAGTGCTCGCAGATCCCTTATAGCTCTATCCTAGTCGCC CGCACCCGTTTGGCGCAGGTTGTGCCGGGCCTGATGCAGCGTGCACTTTATGACCTGAACCCAGCCGGGACGGGGCATTG GACCTACCGCGAGTTTATCGAGGGGCGCGACCCGATCAGCGGTGCGCCGCTTAGTGCCCCGGACAATTTTCAGCATATGT TCCTCAACCCTGGGGACAATGCCAAGAACCTGTCACCTGAGTTCCTGAGGAGCCTTGAGGCGCTGCCAGAAAAGCAGCGG CGTCGGTTTTTCGATGGCATGTACGTCGCGGAGATCGACGGCGCGCTTTGGACGCTTGATCTAATTGAGCGGTGCCGGTC AGAGCCAATCGCTCCTGGCGATCACCGGCTGAGGCGCATCGTCATCGGGGTTGACCCATCGGGGGCTGCGAACAAGGAAG ACGCGAGGTCCGATGAAATCGGCATTGTCGTCGCAGGCATGATGGACGACGGGACGGCGGTCATCCTTGAGGATGGTACT GTCCGGGACGGGCCGTCAGGCTGGGGCAAGGTCGTCGCTGGCCTCTACCATAAGTGGGGTGCTGACCGGGTGATCGCAGA GCGAAACTATGGCGGTGCCATGGTTGAGTTCGTGATCCTCACGGCGGACAAAAGCATTCCGGTTTCGGTGATTACAGCGT CGCGTGGGAAGCACATCCGAGCTGAGCCGGTGTCCGCGCTCTACGAGCAGGGCAAGGTGAGGCACGCGGGCCGGTTTCCT GAGATGGAAGACCAGTTCACCAACTTTTCGACATCCGGATACATGGGCGACCGGTCCCCGGATCGCGCCGACGCGGCTGT GTGGGCGCTCACCGAACTGATGCTCGACCCCGACCAGTTCGACCCCAATAAGTGGATCAAGGCCTTTTCATGA
Upstream 100 bases:
>100_bases GAAGGATTGGTCGGCTACCTGAAGCGGGTGGCGAAAGAGGACGTGAAGGCATTTTCGTCCCTGCTTGGAAAGGTCCTCCC GTTGCAGGTGACAGGCGACA
Downstream 100 bases:
>100_bases ACCGAGCCGCACGCAAGGCAGCAATCCGGGCGCAGGGGGCAGAGAAGCCCAGCGCCCCGCTGCATGATGCGGCGCCGAAG GCGGACAGCTACCAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MMGLSRSSSTLRTAPFELTGRQREALRLLGGPQRHTMLAGGARSGKTFLLTRGVVVRALKAPESRHAILRFRANAVRSSV ALDTLPKVTSLCFPGLKLVEHRQDGFFELPNGSQIWLGGLDDKERVEKILGQEYCLDPESLVLAADLRWVPAHTLNVGDQ IVGFPEDLRGNQTLERSSVERTEIIEAHKYRVVTDRGETIVSAQHKFVYGKPRTHNRLRWVDAQNLKPGDWIKFAASPWA EKKDYTGGWLAGIYDGEGCISQTDTYTHCQVAQKPGLVLDAIREGLAEIGVIANESPQSASGVVNLHCAGMWQAMRLLGM VRPRRLMPKSAKVWEGRRAFNTRGDHHYAKVVSVEYIGRGPVVSLGTSTKTLIADGFLGHNCTLYFNECSQIPYSSILVA RTRLAQVVPGLMQRALYDLNPAGTGHWTYREFIEGRDPISGAPLSAPDNFQHMFLNPGDNAKNLSPEFLRSLEALPEKQR RRFFDGMYVAEIDGALWTLDLIERCRSEPIAPGDHRLRRIVIGVDPSGAANKEDARSDEIGIVVAGMMDDGTAVILEDGT VRDGPSGWGKVVAGLYHKWGADRVIAERNYGGAMVEFVILTADKSIPVSVITASRGKHIRAEPVSALYEQGKVRHAGRFP EMEDQFTNFSTSGYMGDRSPDRADAAVWALTELMLDPDQFDPNKWIKAFS
Sequences:
>Translated_690_residues MMGLSRSSSTLRTAPFELTGRQREALRLLGGPQRHTMLAGGARSGKTFLLTRGVVVRALKAPESRHAILRFRANAVRSSV ALDTLPKVTSLCFPGLKLVEHRQDGFFELPNGSQIWLGGLDDKERVEKILGQEYCLDPESLVLAADLRWVPAHTLNVGDQ IVGFPEDLRGNQTLERSSVERTEIIEAHKYRVVTDRGETIVSAQHKFVYGKPRTHNRLRWVDAQNLKPGDWIKFAASPWA EKKDYTGGWLAGIYDGEGCISQTDTYTHCQVAQKPGLVLDAIREGLAEIGVIANESPQSASGVVNLHCAGMWQAMRLLGM VRPRRLMPKSAKVWEGRRAFNTRGDHHYAKVVSVEYIGRGPVVSLGTSTKTLIADGFLGHNCTLYFNECSQIPYSSILVA RTRLAQVVPGLMQRALYDLNPAGTGHWTYREFIEGRDPISGAPLSAPDNFQHMFLNPGDNAKNLSPEFLRSLEALPEKQR RRFFDGMYVAEIDGALWTLDLIERCRSEPIAPGDHRLRRIVIGVDPSGAANKEDARSDEIGIVVAGMMDDGTAVILEDGT VRDGPSGWGKVVAGLYHKWGADRVIAERNYGGAMVEFVILTADKSIPVSVITASRGKHIRAEPVSALYEQGKVRHAGRFP EMEDQFTNFSTSGYMGDRSPDRADAAVWALTELMLDPDQFDPNKWIKAFS >Mature_690_residues MMGLSRSSSTLRTAPFELTGRQREALRLLGGPQRHTMLAGGARSGKTFLLTRGVVVRALKAPESRHAILRFRANAVRSSV ALDTLPKVTSLCFPGLKLVEHRQDGFFELPNGSQIWLGGLDDKERVEKILGQEYCLDPESLVLAADLRWVPAHTLNVGDQ IVGFPEDLRGNQTLERSSVERTEIIEAHKYRVVTDRGETIVSAQHKFVYGKPRTHNRLRWVDAQNLKPGDWIKFAASPWA EKKDYTGGWLAGIYDGEGCISQTDTYTHCQVAQKPGLVLDAIREGLAEIGVIANESPQSASGVVNLHCAGMWQAMRLLGM VRPRRLMPKSAKVWEGRRAFNTRGDHHYAKVVSVEYIGRGPVVSLGTSTKTLIADGFLGHNCTLYFNECSQIPYSSILVA RTRLAQVVPGLMQRALYDLNPAGTGHWTYREFIEGRDPISGAPLSAPDNFQHMFLNPGDNAKNLSPEFLRSLEALPEKQR RRFFDGMYVAEIDGALWTLDLIERCRSEPIAPGDHRLRRIVIGVDPSGAANKEDARSDEIGIVVAGMMDDGTAVILEDGT VRDGPSGWGKVVAGLYHKWGADRVIAERNYGGAMVEFVILTADKSIPVSVITASRGKHIRAEPVSALYEQGKVRHAGRFP EMEDQFTNFSTSGYMGDRSPDRADAAVWALTELMLDPDQFDPNKWIKAFS
Specific function: Unknown
COG id: COG5323
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76385; Mature: 76385
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGLSRSSSTLRTAPFELTGRQREALRLLGGPQRHTMLAGGARSGKTFLLTRGVVVRALK CCCCCCCCCCEEECCCEECCCHHHHHHHHCCCCHHEEEECCCCCCCEEEEECHHHHHHHC APESRHAILRFRANAVRSSVALDTLPKVTSLCFPGLKLVEHRQDGFFELPNGSQIWLGGL CCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCEEEEECC DDKERVEKILGQEYCLDPESLVLAADLRWVPAHTLNVGDQIVGFPEDLRGNQTLERSSVE CCHHHHHHHHCHHHCCCHHHEEEEECCEECCCEECCCCCHHCCCCHHCCCCCCHHHHCCH RTEIIEAHKYRVVTDRGETIVSAQHKFVYGKPRTHNRLRWVDAQNLKPGDWIKFAASPWA HHHHHHHHCEEEEECCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCCC EKKDYTGGWLAGIYDGEGCISQTDTYTHCQVAQKPGLVLDAIREGLAEIGVIANESPQSA CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEECCCCCCC SGVVNLHCAGMWQAMRLLGMVRPRRLMPKSAKVWEGRRAFNTRGDHHYAKVVSVEYIGRG CCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCHHHCCCHHCCCCCCCEEEEEEEEEEECCC PVVSLGTSTKTLIADGFLGHNCTLYFNECSQIPYSSILVARTRLAQVVPGLMQRALYDLN CEEEECCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PAGTGHWTYREFIEGRDPISGAPLSAPDNFQHMFLNPGDNAKNLSPEFLRSLEALPEKQR CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHH RRFFDGMYVAEIDGALWTLDLIERCRSEPIAPGDHRLRRIVIGVDPSGAANKEDARSDEI HHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC GIVVAGMMDDGTAVILEDGTVRDGPSGWGKVVAGLYHKWGADRVIAERNYGGAMVEFVIL EEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEE TADKSIPVSVITASRGKHIRAEPVSALYEQGKVRHAGRFPEMEDQFTNFSTSGYMGDRSP ECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC DRADAAVWALTELMLDPDQFDPNKWIKAFS CHHHHHHHHHHHHHCCCCCCCCHHHHCCCC >Mature Secondary Structure MMGLSRSSSTLRTAPFELTGRQREALRLLGGPQRHTMLAGGARSGKTFLLTRGVVVRALK CCCCCCCCCCEEECCCEECCCHHHHHHHHCCCCHHEEEECCCCCCCEEEEECHHHHHHHC APESRHAILRFRANAVRSSVALDTLPKVTSLCFPGLKLVEHRQDGFFELPNGSQIWLGGL CCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCEEEEECC DDKERVEKILGQEYCLDPESLVLAADLRWVPAHTLNVGDQIVGFPEDLRGNQTLERSSVE CCHHHHHHHHCHHHCCCHHHEEEEECCEECCCEECCCCCHHCCCCHHCCCCCCHHHHCCH RTEIIEAHKYRVVTDRGETIVSAQHKFVYGKPRTHNRLRWVDAQNLKPGDWIKFAASPWA HHHHHHHHCEEEEECCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCCC EKKDYTGGWLAGIYDGEGCISQTDTYTHCQVAQKPGLVLDAIREGLAEIGVIANESPQSA CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEECCCCCCC SGVVNLHCAGMWQAMRLLGMVRPRRLMPKSAKVWEGRRAFNTRGDHHYAKVVSVEYIGRG CCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCHHHCCCHHCCCCCCCEEEEEEEEEEECCC PVVSLGTSTKTLIADGFLGHNCTLYFNECSQIPYSSILVARTRLAQVVPGLMQRALYDLN CEEEECCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PAGTGHWTYREFIEGRDPISGAPLSAPDNFQHMFLNPGDNAKNLSPEFLRSLEALPEKQR CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHH RRFFDGMYVAEIDGALWTLDLIERCRSEPIAPGDHRLRRIVIGVDPSGAANKEDARSDEI HHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC GIVVAGMMDDGTAVILEDGTVRDGPSGWGKVVAGLYHKWGADRVIAERNYGGAMVEFVIL EEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEE TADKSIPVSVITASRGKHIRAEPVSALYEQGKVRHAGRFPEMEDQFTNFSTSGYMGDRSP ECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC DRADAAVWALTELMLDPDQFDPNKWIKAFS CHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA