Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246713
Identifier: 154246713
GI number: 154246713
Start: 3071118
End: 3072239
Strand: Reverse
Name: 154246713
Synonym: Xaut_2774
Alternate gene names: NA
Gene position: 3072239-3071118 (Counterclockwise)
Preceding gene: 154246714
Following gene: 154246709
Centisome position: 57.87
GC content: 68.09
Gene sequence:
>1122_bases ATGACCACATCCCGGAACGACGACACCCCCGACGCCCGGACCAGCCGTCGCACAGTCCTGCGCTACGGCCTTGCCGGCGC CGCCGCCACCGCCTTCGGCGGCCTGGGCGGACACGTGCTCGCCGCCAATCTCCTCGGCGCGCCGGCGCCCATCGGCACGG CGGTGGACGCGCAGTTTCCCCTCTGCCTCACCGCCGCCGACGGCCCCGCTCCCACCGGCCCCCTGCGCCAGCTGAAGCTG GCCTGGAACGCCAGCGCCATCTGCACCGCCGCAGCCCCGGTGGCCAAGGAAACCGGCATCTTCGCCAGGCACGGCCTCGA CGTGGAGTTCGTCAATTTCGGCAGCTCCACCGAGCAGTTGCTGGAAGCCATCGCCACCGGCAAGGCGGATGCGGGCATCG GCATGGCCCTGCGCTGGCTGAAGCCGCTGGAGCAGGGCTTCGACGTGAAGATCACCGCCGGCGTCCACGGCGGTTGCATG CGCCTGTTGGGCGATGCCGGCGCCGGCATCACCAGCATCGCATCGCTCAAGGGCAAGACCATCGCGGTCTCGGACCAGGC CTCGCCGGGCAAGAACTTCTTCTCCATCTACCTCGCCCAGAACGGTATCGACCCGTTCAAGGACGTGGAATGGCGCCAAT ATCCGCTGGAGGCGCTGCCGCTCGCCATCGACAAGGGCGAGGCCCATGCCCTGGCCGACGCCGATCCGCGCACCTGGATC TGGATCAAGGAATCCAAGGGTAAGCTAGTGGAACTGGCCACCAACCTCTCGGATAAATATGCCGACCGCACCTGCTGCAT CATCGGCGTGCGCGGCAGCCTCATCCGCGACGAAAAGCCGGTGGCCGCTGCCCTCACCCGCGCCATCCTGGAGGGCGCCC ATCAGGTAGGCGTCGATCCCGCGCTCGCCGCGCGCGTTTTCTCCGGCTACGGCGGCAAGGGCTCGGTGGACGACCTGGTC GCCATGCTGACCAGCCAGGACCACCACCACAGCCCCATCGGCGGTGACCTGACCAGGCAGATCGCCCTCTATGCGGACGA GCTGAAGCTGGTGCAGGTCTTCAAGCCCAACACCAACACCCAGCGCTTCGCCGAGAAGGTCTATGCCGACGTGCTGAGCT GA
Upstream 100 bases:
>100_bases CGGCCGCAAGCGTAGGGCGAACCGCAAGGCCCGATCGGCCGGCCATCGCCCAGCGCCCCCATTCCTTTTCAGGTCCCGGT TCTTTCAGGAGCTTCCAACC
Downstream 100 bases:
>100_bases CGGACGCGGCCGGTCCCGCTCCACCCACGCGGTCGGAGCGGGACCGGAACGGGATCGGCAGGAAAGGCGAGTGCCACAAA GGCAAGGGGCCGGAACGTGC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Protein; Tat Pathway Signal Sequence Domain-Containing Protein; NLPA Lipoprotein; Nitrate Transport Protein NrtA; Lipoprotein
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTTSRNDDTPDARTSRRTVLRYGLAGAAATAFGGLGGHVLAANLLGAPAPIGTAVDAQFPLCLTAADGPAPTGPLRQLKL AWNASAICTAAAPVAKETGIFARHGLDVEFVNFGSSTEQLLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGVHGGCM RLLGDAGAGITSIASLKGKTIAVSDQASPGKNFFSIYLAQNGIDPFKDVEWRQYPLEALPLAIDKGEAHALADADPRTWI WIKESKGKLVELATNLSDKYADRTCCIIGVRGSLIRDEKPVAAALTRAILEGAHQVGVDPALAARVFSGYGGKGSVDDLV AMLTSQDHHHSPIGGDLTRQIALYADELKLVQVFKPNTNTQRFAEKVYADVLS
Sequences:
>Translated_373_residues MTTSRNDDTPDARTSRRTVLRYGLAGAAATAFGGLGGHVLAANLLGAPAPIGTAVDAQFPLCLTAADGPAPTGPLRQLKL AWNASAICTAAAPVAKETGIFARHGLDVEFVNFGSSTEQLLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGVHGGCM RLLGDAGAGITSIASLKGKTIAVSDQASPGKNFFSIYLAQNGIDPFKDVEWRQYPLEALPLAIDKGEAHALADADPRTWI WIKESKGKLVELATNLSDKYADRTCCIIGVRGSLIRDEKPVAAALTRAILEGAHQVGVDPALAARVFSGYGGKGSVDDLV AMLTSQDHHHSPIGGDLTRQIALYADELKLVQVFKPNTNTQRFAEKVYADVLS >Mature_372_residues TTSRNDDTPDARTSRRTVLRYGLAGAAATAFGGLGGHVLAANLLGAPAPIGTAVDAQFPLCLTAADGPAPTGPLRQLKLA WNASAICTAAAPVAKETGIFARHGLDVEFVNFGSSTEQLLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGVHGGCMR LLGDAGAGITSIASLKGKTIAVSDQASPGKNFFSIYLAQNGIDPFKDVEWRQYPLEALPLAIDKGEAHALADADPRTWIW IKESKGKLVELATNLSDKYADRTCCIIGVRGSLIRDEKPVAAALTRAILEGAHQVGVDPALAARVFSGYGGKGSVDDLVA MLTSQDHHHSPIGGDLTRQIALYADELKLVQVFKPNTNTQRFAEKVYADVLS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39239; Mature: 39108
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSRNDDTPDARTSRRTVLRYGLAGAAATAFGGLGGHVLAANLLGAPAPIGTAVDAQFP CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC LCLTAADGPAPTGPLRQLKLAWNASAICTAAAPVAKETGIFARHGLDVEFVNFGSSTEQL EEEEECCCCCCCCHHHHEEEEECCCCHHHHCCCCHHHCCCEEECCCCEEEEECCCCHHHH LEAIATGKADAGIGMALRWLKPLEQGFDVKITAGVHGGCMRLLGDAGAGITSIASLKGKT HHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHCCCCE IAVSDQASPGKNFFSIYLAQNGIDPFKDVEWRQYPLEALPLAIDKGEAHALADADPRTWI EEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCEEEECCCCCEECCCCCCEEE WIKESKGKLVELATNLSDKYADRTCCIIGVRGSLIRDEKPVAAALTRAILEGAHQVGVDP EEECCCCCEEEEHHCCHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH ALAARVFSGYGGKGSVDDLVAMLTSQDHHHSPIGGDLTRQIALYADELKLVQVFKPNTNT HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCH QRFAEKVYADVLS HHHHHHHHHHHCC >Mature Secondary Structure TTSRNDDTPDARTSRRTVLRYGLAGAAATAFGGLGGHVLAANLLGAPAPIGTAVDAQFP CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC LCLTAADGPAPTGPLRQLKLAWNASAICTAAAPVAKETGIFARHGLDVEFVNFGSSTEQL EEEEECCCCCCCCHHHHEEEEECCCCHHHHCCCCHHHCCCEEECCCCEEEEECCCCHHHH LEAIATGKADAGIGMALRWLKPLEQGFDVKITAGVHGGCMRLLGDAGAGITSIASLKGKT HHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHCCCCE IAVSDQASPGKNFFSIYLAQNGIDPFKDVEWRQYPLEALPLAIDKGEAHALADADPRTWI EEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCEEEECCCCCEECCCCCCEEE WIKESKGKLVELATNLSDKYADRTCCIIGVRGSLIRDEKPVAAALTRAILEGAHQVGVDP EEECCCCCEEEEHHCCHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH ALAARVFSGYGGKGSVDDLVAMLTSQDHHHSPIGGDLTRQIALYADELKLVQVFKPNTNT HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCH QRFAEKVYADVLS HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA