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The map label for this gene is soxC [H]

Identifier: 154246707

GI number: 154246707

Start: 3065303

End: 3066526

Strand: Reverse

Name: soxC [H]

Synonym: Xaut_2768

Alternate gene names: 154246707

Gene position: 3066526-3065303 (Counterclockwise)

Preceding gene: 154246708

Following gene: 154246706

Centisome position: 57.76

GC content: 68.63

Gene sequence:

>1224_bases
ATGACCCAGATCGACGACGCCTGGGGCGCCGGCCCCACCACCCGCTACGAAGAGCTGGCGCAGCGCTTCCGGCCGGTCTT
TCGCCGCATCCGCGAGAGCGCGGTGGAGCGCGAGCTGACCCACCGCCTCCCGCGCGAGGAGATTTCATGGCTCAAGGATT
CCGGCTTCACCACCTTGCGCCTGACGCAGGACGAGGGCGGCTTCGGCGCCAGCCTGCCGGAGCTGTTCAACCTCTTGATC
GAGCTCTCGGCCGCCGACCCCAACGTGACCAATGCGCTGCGGGCCCATTTCGGCTTCACCGAGGAGGTGCTGAACTCCCC
CTCCAAGGATTATCGCGACCGCTGGGTGAAGCGCATCGCCGCCAGGCAGACCTCGGGCAGCGGATTTTCCGAGGCCGGCG
ACACCAAGGTCGGCCATTTCTCCACCCGCGTGGTACGCGAAGGCGACAAGTGGCGCATCGACGGCGAGAAATACTACACC
ACCGGCTCCCTCTTCGCCGACTGGATCAATCTCGGCGCCGATGACGAGAACGGCGAGCTCATCCTGGTCCAGGTGCCCAC
CGACGCGCCGGGCGTGACCATCGTCGACGACTGGGACGGCTTCGGCCAGCAGCTCACCGCCTCCGGCACGACGAAGTTCG
AGGGCGTCACCATCTCCGACGACCTCGTCAATCCGCAGCGCAAGCGCTTCCGCTATTCGGTCGCCTTCTACCAGTTGGTG
CACCTGGCGACGCTCGCCGGCATCGGCCGGGCGGCGGCGGCGGACGTGGCCCAGCTCGTCGGCGCCCGCAAGCGTGTGTT
CAGCCACGGCAATGCCGATCGCGTCGGGGCCGATCCGCAAATCCTCCAGGTGGTGGGCAAGGTGCGGGCCAACGCCTATG
GCGCCGGCGCCACCGTGCTGAAGGCCGCCGAGGCGCTCCAGCGGGTCTATGAAACCCGCGATACTAAGGCCGCCGAAACC
CAGGACCTCTCCGTCGCGGTGGCGGACCTGGAGGTGAACCAGGGCGTGACCGTGGTCACCTCCCTGATCCTCGACGCCAC
CACCCTGCTGTTCGACGCACTGGGCGCCTCGGCGGCGAAGCGCGGCGTCGGCCTCGACCGGCACTGGCGCAACGCGCGCA
CCCTGTCCTCCCACAATCCGCGCATCTACCGCGAACGCATCGTCGGCGACTTCGCGGTGAACGGCACCTGGCCCCCCGGC
CCTTACCGCATCGGCACGCCCTGA

Upstream 100 bases:

>100_bases
ACTCATCGCCGCGCGCCACGGCGTGCCCTTTCCCCATTGAACATCACCCGCCCCGCCCGGCGGGACCGATTGCAAAGGAC
CCGATCATGAGGACCCAGTC

Downstream 100 bases:

>100_bases
GCGGAACGGCGCCCCGCGCCCGTTCCGAACCGTCTCATCCTCTCTCACCATCAGACAGGGGCGTGCGTCATCCGATCTGC
CCGCCGTCAGGCAGGTCGGC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTQIDDAWGAGPTTRYEELAQRFRPVFRRIRESAVERELTHRLPREEISWLKDSGFTTLRLTQDEGGFGASLPELFNLLI
ELSAADPNVTNALRAHFGFTEEVLNSPSKDYRDRWVKRIAARQTSGSGFSEAGDTKVGHFSTRVVREGDKWRIDGEKYYT
TGSLFADWINLGADDENGELILVQVPTDAPGVTIVDDWDGFGQQLTASGTTKFEGVTISDDLVNPQRKRFRYSVAFYQLV
HLATLAGIGRAAAADVAQLVGARKRVFSHGNADRVGADPQILQVVGKVRANAYGAGATVLKAAEALQRVYETRDTKAAET
QDLSVAVADLEVNQGVTVVTSLILDATTLLFDALGASAAKRGVGLDRHWRNARTLSSHNPRIYRERIVGDFAVNGTWPPG
PYRIGTP

Sequences:

>Translated_407_residues
MTQIDDAWGAGPTTRYEELAQRFRPVFRRIRESAVERELTHRLPREEISWLKDSGFTTLRLTQDEGGFGASLPELFNLLI
ELSAADPNVTNALRAHFGFTEEVLNSPSKDYRDRWVKRIAARQTSGSGFSEAGDTKVGHFSTRVVREGDKWRIDGEKYYT
TGSLFADWINLGADDENGELILVQVPTDAPGVTIVDDWDGFGQQLTASGTTKFEGVTISDDLVNPQRKRFRYSVAFYQLV
HLATLAGIGRAAAADVAQLVGARKRVFSHGNADRVGADPQILQVVGKVRANAYGAGATVLKAAEALQRVYETRDTKAAET
QDLSVAVADLEVNQGVTVVTSLILDATTLLFDALGASAAKRGVGLDRHWRNARTLSSHNPRIYRERIVGDFAVNGTWPPG
PYRIGTP
>Mature_406_residues
TQIDDAWGAGPTTRYEELAQRFRPVFRRIRESAVERELTHRLPREEISWLKDSGFTTLRLTQDEGGFGASLPELFNLLIE
LSAADPNVTNALRAHFGFTEEVLNSPSKDYRDRWVKRIAARQTSGSGFSEAGDTKVGHFSTRVVREGDKWRIDGEKYYTT
GSLFADWINLGADDENGELILVQVPTDAPGVTIVDDWDGFGQQLTASGTTKFEGVTISDDLVNPQRKRFRYSVAFYQLVH
LATLAGIGRAAAADVAQLVGARKRVFSHGNADRVGADPQILQVVGKVRANAYGAGATVLKAAEALQRVYETRDTKAAETQ
DLSVAVADLEVNQGVTVVTSLILDATTLLFDALGASAAKRGVGLDRHWRNARTLSSHNPRIYRERIVGDFAVNGTWPPGP
YRIGTP

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44706; Mature: 44575

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIDDAWGAGPTTRYEELAQRFRPVFRRIRESAVERELTHRLPREEISWLKDSGFTTLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEE
LTQDEGGFGASLPELFNLLIELSAADPNVTNALRAHFGFTEEVLNSPSKDYRDRWVKRIA
EECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
ARQTSGSGFSEAGDTKVGHFSTRVVREGDKWRIDGEKYYTTGSLFADWINLGADDENGEL
HHCCCCCCCCCCCCCCCCHHHHHHEECCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCE
ILVQVPTDAPGVTIVDDWDGFGQQLTASGTTKFEGVTISDDLVNPQRKRFRYSVAFYQLV
EEEECCCCCCCEEEEECCCCCCCEEECCCCCEECCEEECHHHCCHHHHHHHHHHHHHHHH
HLATLAGIGRAAAADVAQLVGARKRVFSHGNADRVGADPQILQVVGKVRANAYGAGATVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
KAAEALQRVYETRDTKAAETQDLSVAVADLEVNQGVTVVTSLILDATTLLFDALGASAAK
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGVGLDRHWRNARTLSSHNPRIYRERIVGDFAVNGTWPPGPYRIGTP
HCCCCCHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCEECCCC
>Mature Secondary Structure 
TQIDDAWGAGPTTRYEELAQRFRPVFRRIRESAVERELTHRLPREEISWLKDSGFTTLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEE
LTQDEGGFGASLPELFNLLIELSAADPNVTNALRAHFGFTEEVLNSPSKDYRDRWVKRIA
EECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
ARQTSGSGFSEAGDTKVGHFSTRVVREGDKWRIDGEKYYTTGSLFADWINLGADDENGEL
HHCCCCCCCCCCCCCCCCHHHHHHEECCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCE
ILVQVPTDAPGVTIVDDWDGFGQQLTASGTTKFEGVTISDDLVNPQRKRFRYSVAFYQLV
EEEECCCCCCCEEEEECCCCCCCEEECCCCCEECCEEECHHHCCHHHHHHHHHHHHHHHH
HLATLAGIGRAAAADVAQLVGARKRVFSHGNADRVGADPQILQVVGKVRANAYGAGATVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
KAAEALQRVYETRDTKAAETQDLSVAVADLEVNQGVTVVTSLILDATTLLFDALGASAAK
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGVGLDRHWRNARTLSSHNPRIYRERIVGDFAVNGTWPPGPYRIGTP
HCCCCCHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]