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The map label for this gene is yeiE [H]

Identifier: 154246599

GI number: 154246599

Start: 2951863

End: 2952804

Strand: Reverse

Name: yeiE [H]

Synonym: Xaut_2659

Alternate gene names: 154246599

Gene position: 2952804-2951863 (Counterclockwise)

Preceding gene: 154246600

Following gene: 154246598

Centisome position: 55.62

GC content: 62.53

Gene sequence:

>942_bases
ATGACCCTCGAACAACTGCGGATCTTCGTCGCCGTCGCCGAGCGGGAGCACGTCACGCAGGGCGCGCGCGATCTGAACTT
AACGCAATCGGCCACGAGCGCGGCGATCGCCGCGCTCGAGGCTCGTTATGCAACCAAGCTTTTCGATCGCGTTGGACGCC
GCATCGTTCTGACCGAGGCCGGACGACTGTTTCTCAGCGAAGCGAAGGCGGTGCTCGCCCGTGTCCATGCTGCCGAGAAG
GTCCTGACGGATCTTGCCGATCTGACCCGCGGCTCGCTCGTCATCGCAGCCAGTCAGACCATTGCGAATTACTGGCTTCC
GCCGTTCATCAAACGCTTTCGGTCGCAGTTTCCTGGCGTGGCCATCACTCTCACCATCGACAATACCGATGGCGTCGCCC
GACGGATCAATGAAGGCTTGGCTGATTTAGGGCTGGTCGAGGGCGAGATCGACGACCCGTCTGTCTCGGTCGCGCCATTC
GCCGAGGATGAGCTGGTTCTCGTCGTGCCGCCGGATCACGCGTGGGCCCATGATCCCCGGCGACAGCCGGCCGAGCTCGG
TGTCGGCCCCTGGGTTCTGCGCGAGCATGGCTCCGGCACGCGCGCCATCTTCGAAACCACCTTGTCACAATTCGGACTAG
CACCACGAGACCTCGCGATATCTCTCGAACTGCCCTCCAATGAAGCCGTCCGCTCCGCCGTCGAGGCCGGCGCTGGCGTC
ACCGTCGTGTCCGGCCTGGTGGTCAGCAACGCACTGAAGGCAGGAAGCCTCGTGCAGGTGAAGCTCGATTTGCCCAAACG
GCGCTTCTTTGCCTTGCGCCACAAGGAATTCTCCATGACGCGCGCCCAGCGCGCCTTCCTGGATTTGATCGCGCCCAAGC
CATCTTTGACGCAACGTCATGTGCCAGTTCCGTCAAGAGGGCGAAATGACCAGCTATCTTGA

Upstream 100 bases:

>100_bases
GCTAAAGGCGTTCGGCCCTTCCTGCTCGGTCTTGCATCCTTCCTGTTCATCGCGAGCTTCAGCTTGATGCTTGTGAAGAT
GACGAGTTGAGAGCCTTCCG

Downstream 100 bases:

>100_bases
TCCGGTAATTCTCGCTCGCGCGCAATTCGCGTTTCCGGTGTCGTTCCATTTCATCTTCCCTGCCTTTTCGATCGGCCTGG
CGAGCTATCTGATGGTCCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEAGRLFLSEAKAVLARVHAAEK
VLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGVAITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPF
AEDELVLVVPPDHAWAHDPRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV
TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQRHVPVPSRGRNDQLS

Sequences:

>Translated_313_residues
MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEAGRLFLSEAKAVLARVHAAEK
VLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGVAITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPF
AEDELVLVVPPDHAWAHDPRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV
TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQRHVPVPSRGRNDQLS
>Mature_312_residues
TLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEAGRLFLSEAKAVLARVHAAEKV
LTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGVAITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFA
EDELVLVVPPDHAWAHDPRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGVT
VVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQRHVPVPSRGRNDQLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=294, Percent_Identity=35.3741496598639, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI157672245, Length=295, Percent_Identity=28.8135593220339, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI145693105, Length=290, Percent_Identity=24.8275862068966, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082132, Length=266, Percent_Identity=25.187969924812, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786401, Length=309, Percent_Identity=25.2427184466019, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788748, Length=296, Percent_Identity=25.6756756756757, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787879, Length=253, Percent_Identity=29.2490118577075, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790399, Length=284, Percent_Identity=24.2957746478873, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787530, Length=251, Percent_Identity=27.8884462151394, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788296, Length=247, Percent_Identity=26.7206477732794, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788887, Length=264, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1789173, Length=256, Percent_Identity=25.78125, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787806, Length=244, Percent_Identity=25.8196721311475, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787128, Length=307, Percent_Identity=25.0814332247557, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1787589, Length=173, Percent_Identity=31.7919075144509, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790208, Length=255, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789639, Length=264, Percent_Identity=25.3787878787879, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787601, Length=174, Percent_Identity=25.8620689655172, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693193, Length=266, Percent_Identity=25.187969924812, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788626, Length=242, Percent_Identity=31.8181818181818, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34024; Mature: 33893

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA
CCHHHHEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHCCCE
AITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFAEDELVLVVPPDHAWAHDPR
EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCC
RQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV
CCCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCH
TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQRH
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VPVPSRGRNDQLS
CCCCCCCCCCCCC
>Mature Secondary Structure 
TLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA
CHHHHEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHCCCE
AITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFAEDELVLVVPPDHAWAHDPR
EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCC
RQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV
CCCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCH
TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLIAPKPSLTQRH
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VPVPSRGRNDQLS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]