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The map label for this gene is nrtC [H]

Identifier: 154246446

GI number: 154246446

Start: 2800093

End: 2801226

Strand: Reverse

Name: nrtC [H]

Synonym: Xaut_2505

Alternate gene names: 154246446

Gene position: 2801226-2800093 (Counterclockwise)

Preceding gene: 154246447

Following gene: 154246445

Centisome position: 52.76

GC content: 70.9

Gene sequence:

>1134_bases
ATGAGACGGCTCGCCATGGGGTTCATCCCCCTCACCGACGCGGCGGTGCTGATCGCCGCCGCGGAGCGCGGCTTCGCCAT
GGCGGAGGGCATCGAGATCGAGCTGCACAAGGAGGTGTCCTGGGCCAACATCCGCGACAAGGTGAATGTGGGCCTGCTCG
ACGGCGCCCATATGCTGGGCCCGCTGGCCATCGCCTCCTCGCTGGGCCTCGGTCATGTGCGGGTGCCGCTGGTGGTGCCG
TTCGCGCTTAATCTCAACGGCAGCGCCGTCACCATCGACAAGCACGTCTACGCCGCCATGGCCGAGGTGGGGGAAGACCT
CGCAACCGCCCTCGGCGCGGCGCAGGCGCTGGGCAAGGTGGTGCGCCAGCGCAAGGCCGAGGGCCGCGACCCGCTCACCT
TCGCCTCGGTCTATGCCTTCTCCACCCACACCTACCTGCTGCGCCACTTCCTGACCGGCGGCGGCATCGACCCGGACCGG
GACGTGCGCTTCGTGGTGGTGCCGCCCCCGTTCATGGCCGAGAGCCTGCGCGGCGGGCTCATCCATGGCTTCTCCGTGGG
CTCGCCCTGGAATTCTGTGGCGGTGGACGCCGACGTGGGGCGCATCGCGGTGCTGGGCGCCGAGATCTTCGGCTGGGTGC
CGGAAAAGGTGCTGGGGGTGCACGCCCGCTTCGCCAATGCCGAGCCCGAGCTGCTGCACCGCCTGGTGCGCGCGCTTTAC
GCCGCCGCCCGCTGGTGCGAGGACCCGGCCAACCACGACGACCTCGCCCGGCTTCTGAGCGAGCCGCGCCATCTCAACCT
GCCCGCCGACGTGCTGAAGCGCACCCTGGACGGCCGGCTGCATTCGGCCCCCGGCGGCCGGCTGCGCGCGCATCCCGACT
ATCTGGTGCTCAACCGCGACGGCGCCAACCGGCCCGAGCGCGACCATGCCCTGTGGATGTATGCCCAGATCGTCGCCGCA
GGCCAGGGCGAGTTCGCCGCCGACGCGGCGCGCGAAGCCATGGGCGTGTACCGGCCGGACATCTTCGATGCGGCGGTCGG
CCCGGTGGCGGTGAAGCATCCGGAACCGGATTGCGTCGCCACCCAGTTCGGCGCCGTGTTCGATGCGCGGGCATTCCTGG
GCGATGGGAGTTAG

Upstream 100 bases:

>100_bases
AAGAGGCCGCCTACGGCCTGCTGCGCCGCACCGCCATGAACGAGAAGAAGCGCATCGCCGACATTGCCCAGTCCATCATC
ACCGCTGCGGAGCTCCTGCG

Downstream 100 bases:

>100_bases
GCGCGCAGCCAGGACCCGAAGACCGCTGCGAATGGGTTCGAAACAGCCCCTCGATGCCCACCGCAGCGCACAATTTGAAT
GCAGGTGCATCGCACCCATG

Product: putative nitrate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRRLAMGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAVTIDKHVYAAMAEVGEDLATALGAAQALGKVVRQRKAEGRDPLTFASVYAFSTHTYLLRHFLTGGGIDPDR
DVRFVVVPPPFMAESLRGGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPELLHRLVRALY
AAARWCEDPANHDDLARLLSEPRHLNLPADVLKRTLDGRLHSAPGGRLRAHPDYLVLNRDGANRPERDHALWMYAQIVAA
GQGEFAADAAREAMGVYRPDIFDAAVGPVAVKHPEPDCVATQFGAVFDARAFLGDGS

Sequences:

>Translated_377_residues
MRRLAMGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAVTIDKHVYAAMAEVGEDLATALGAAQALGKVVRQRKAEGRDPLTFASVYAFSTHTYLLRHFLTGGGIDPDR
DVRFVVVPPPFMAESLRGGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPELLHRLVRALY
AAARWCEDPANHDDLARLLSEPRHLNLPADVLKRTLDGRLHSAPGGRLRAHPDYLVLNRDGANRPERDHALWMYAQIVAA
GQGEFAADAAREAMGVYRPDIFDAAVGPVAVKHPEPDCVATQFGAVFDARAFLGDGS
>Mature_377_residues
MRRLAMGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAVTIDKHVYAAMAEVGEDLATALGAAQALGKVVRQRKAEGRDPLTFASVYAFSTHTYLLRHFLTGGGIDPDR
DVRFVVVPPPFMAESLRGGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPELLHRLVRALY
AAARWCEDPANHDDLARLLSEPRHLNLPADVLKRTLDGRLHSAPGGRLRAHPDYLVLNRDGANRPERDHALWMYAQIVAA
GQGEFAADAAREAMGVYRPDIFDAAVGPVAVKHPEPDCVATQFGAVFDARAFLGDGS

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 40475; Mature: 40475

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAMGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLG
CCCCEECCEEHHHHHHHHHHHHCCCEECCCCEEEEECCCCHHCCCCCCCEEEECCHHHHH
PLAIASSLGLGHVRVPLVVPFALNLNGSAVTIDKHVYAAMAEVGEDLATALGAAQALGKV
HHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQRKAEGRDPLTFASVYAFSTHTYLLRHFLTGGGIDPDRDVRFVVVPPPFMAESLRGGL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCE
IHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPELLHRLVRALY
EEEECCCCCCCCEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AAARWCEDPANHDDLARLLSEPRHLNLPADVLKRTLDGRLHSAPGGRLRAHPDYLVLNRD
HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCCCCCEECCCCEEEEECC
GANRPERDHALWMYAQIVAAGQGEFAADAAREAMGVYRPDIFDAAVGPVAVKHPEPDCVA
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCHHH
TQFGAVFDARAFLGDGS
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRLAMGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLG
CCCCEECCEEHHHHHHHHHHHHCCCEECCCCEEEEECCCCHHCCCCCCCEEEECCHHHHH
PLAIASSLGLGHVRVPLVVPFALNLNGSAVTIDKHVYAAMAEVGEDLATALGAAQALGKV
HHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQRKAEGRDPLTFASVYAFSTHTYLLRHFLTGGGIDPDRDVRFVVVPPPFMAESLRGGL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCE
IHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPELLHRLVRALY
EEEECCCCCCCCEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AAARWCEDPANHDDLARLLSEPRHLNLPADVLKRTLDGRLHSAPGGRLRAHPDYLVLNRD
HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCCCCCEECCCCEEEEECC
GANRPERDHALWMYAQIVAAGQGEFAADAAREAMGVYRPDIFDAAVGPVAVKHPEPDCVA
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCHHH
TQFGAVFDARAFLGDGS
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]