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The map label for this gene is yrkJ [H]

Identifier: 154246428

GI number: 154246428

Start: 2779782

End: 2780705

Strand: Reverse

Name: yrkJ [H]

Synonym: Xaut_2487

Alternate gene names: 154246428

Gene position: 2780705-2779782 (Counterclockwise)

Preceding gene: 154246430

Following gene: 154246427

Centisome position: 52.38

GC content: 68.51

Gene sequence:

>924_bases
GTGACCATCTACCTGCCCATCGCCGAGCTTCCGATCGCCATCTTCACCGTCTTCGCAATGGGGCTGGCGGTGGGGTTCAT
CTCCGGCATGTTCGGCGTCGGCGGCGGCTTCCTGATGACGCCGCTGCTCATTTTCACCGGCGTGCCGCCGGCGGTGGCGG
TGGCGAGCGTGTCGCCCTACATGGCCGCCTCGTCCTTTTCCGGTGCCCTCTCCTACTGGCGCAAGGGCATGATGGACCTG
ACGCTCGCCGGCGTGCTGCTGAGCGGGGGCCTGGCTGGAACAGCGGCCGGGGTAATGCTGTTCCTGTGGCTGCGGGTGAT
CGGCCAGGTGGATCTCGCCATCCGCATCTCCTATGCGCTGCTGCTGGGCACAATCGGGACGCTCATGCTGGTGGAGAGCC
TGAAGGCCCTGGCGCGGATGCGCGCCGGCCAGCCGCCCACGGTGCGCCGTCCCGGCACTCGGGCCTGGTTCATGCGGCTG
CCGCTGAAGATGCGCTTCCGCCGCTCCCGCATCTATGTCTCGGCACTCCCGGTGATCGGCATCGGCTTCATCATCGGTCT
GCTCGGCGCGGTGCTGGGCGTGGGCGGTGGCTTCATCCTGGTGCCCGCACTCATCTATCTGCTGCGGGTGCCGACCCAGA
CTTCGGTGGGCACCTCGCTGGTGCTGACCCTCGTGACCATGGCGGCGGCCACCGTGCTTCATGCCGAGGCCAACGGCACC
GTGGATGCTGTGCTCGCCTTCGTGCTGATGATCGGCGGTACCATGGGTGCCCAGTTCGGCGCACGTACCGGACAGACCCT
GAAGGCAGAGCACCTGCGCCTCCTCCTCGGCATCCTGGTCCTGTCCGTGGCGGTGCGCGTCGCCGTCGACCTCGTCAGCC
GCCCGGCGGACACCTTCGCGGTCACCCGGGAGGCGCAGCCGTGA

Upstream 100 bases:

>100_bases
TTGACTGCACATCCATTTGCCCGATGCGTCCGCTTCAGCTTTCATCCGCCCTGCTCCAGCCGTATAGGCACGGACGCCGC
GCGCCAGCGAAAGTTCCCCC

Downstream 100 bases:

>100_bases
AGGAAGAGGTCGGCGCAGCCGTGAAGCAAAGCTTGGGCGCAGCCTTGAGGAGCCTGCGGATCGGCTCGGCGCTTCTCGCC
GTCATGATCGGCCTCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPYMAASSFSGALSYWRKGMMDL
TLAGVLLSGGLAGTAAGVMLFLWLRVIGQVDLAIRISYALLLGTIGTLMLVESLKALARMRAGQPPTVRRPGTRAWFMRL
PLKMRFRRSRIYVSALPVIGIGFIIGLLGAVLGVGGGFILVPALIYLLRVPTQTSVGTSLVLTLVTMAAATVLHAEANGT
VDAVLAFVLMIGGTMGAQFGARTGQTLKAEHLRLLLGILVLSVAVRVAVDLVSRPADTFAVTREAQP

Sequences:

>Translated_307_residues
MTIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPYMAASSFSGALSYWRKGMMDL
TLAGVLLSGGLAGTAAGVMLFLWLRVIGQVDLAIRISYALLLGTIGTLMLVESLKALARMRAGQPPTVRRPGTRAWFMRL
PLKMRFRRSRIYVSALPVIGIGFIIGLLGAVLGVGGGFILVPALIYLLRVPTQTSVGTSLVLTLVTMAAATVLHAEANGT
VDAVLAFVLMIGGTMGAQFGARTGQTLKAEHLRLLLGILVLSVAVRVAVDLVSRPADTFAVTREAQP
>Mature_306_residues
TIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPYMAASSFSGALSYWRKGMMDLT
LAGVLLSGGLAGTAAGVMLFLWLRVIGQVDLAIRISYALLLGTIGTLMLVESLKALARMRAGQPPTVRRPGTRAWFMRLP
LKMRFRRSRIYVSALPVIGIGFIIGLLGAVLGVGGGFILVPALIYLLRVPTQTSVGTSLVLTLVTMAAATVLHAEANGTV
DAVLAFVLMIGGTMGAQFGARTGQTLKAEHLRLLLGILVLSVAVRVAVDLVSRPADTFAVTREAQP

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32159; Mature: 32028

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPY
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHH
MAASSFSGALSYWRKGMMDLTLAGVLLSGGLAGTAAGVMLFLWLRVIGQVDLAIRISYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LLGTIGTLMLVESLKALARMRAGQPPTVRRPGTRAWFMRLPLKMRFRRSRIYVSALPVIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGFIIGLLGAVLGVGGGFILVPALIYLLRVPTQTSVGTSLVLTLVTMAAATVLHAEANGT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VDAVLAFVLMIGGTMGAQFGARTGQTLKAEHLRLLLGILVLSVAVRVAVDLVSRPADTFA
HHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
VTREAQP
ECCCCCC
>Mature Secondary Structure 
TIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPY
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHH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ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]