Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246339
Identifier: 154246339
GI number: 154246339
Start: 2675632
End: 2676423
Strand: Direct
Name: 154246339
Synonym: Xaut_2398
Alternate gene names: NA
Gene position: 2675632-2676423 (Clockwise)
Preceding gene: 154246338
Following gene: 154246346
Centisome position: 50.4
GC content: 65.03
Gene sequence:
>792_bases ATGCCCCTTCCGTTTCCCAAGTTCCGCCTGCTGGACCTTTCTGTGACACTCGCGAACAACCCCTTCACCGACCCGCCGGG ATACGGCCCGGAGATCGTGTATCTCGACCATGACCGGGGGGCCGATGATTTCGCGAAGATCTTCCCCGGCCTTGCCAAGG AGGATTTTCCCGGCGGCGAGGGCCCGGCGGCTGAGCTCCTGCACGTCTCCGCCCACAACGGCACCCATATGGATGCGCCC TGGCACTATGCCTCGACCATGGATGGCGGCGCGCCGGCCAGCACGATCGAGCAACTGCCGCTCGAGTGGTGCTTCCAGCC GGGGGTGAAGCTCGATTTCCGGCAGATGCCCGATGGTCATATCGTCACCGCCGCCGACATCGCGGCCGAGCTGGACAGGA TCGGCCATGAGCTGGCCCCGCTGGACATTGTAGTGGTGAACACCGCCGCCGGCGCGAGATATGGCCAGCCCGGCTATATC GATGTGGGCTGCGGCATGGGACGGGAGGCGACGCTTTACCTGCTCGAACGTGGCGTGCGGGTGGTGGGCACCGACGCCTG GAGCTGGGACCCACCGTTCTCCTTCACGCGGCAGCGCTATTTGGAAACCGGCGATGCCAGTCTGATCTGGGAAGGCCACA AGGCGGGCCGCGACATCGGCTACGGCCAGATGGAGAAGCTGACCAATCTCGATCTCCTGCCGCCCGACGGCTTCTGGATC TCCTGCTTTCCCTACAAGATCGAGCGTGGATCGGCGGGCTTCATCCGCGCGGTCGCCTTCCTGCCAGAGTAG
Upstream 100 bases:
>100_bases GGCTTCGCACACGACGGCTCGGCGCTTCGGCTGGTCGCAGCGGCGCTGGCCGCGGATTGAGCCGGTCATTTCTTCCCCGA CCCGACACAGGAAAAACGAG
Downstream 100 bases:
>100_bases GGTCGTGCGGCTGAGCGGAACAGCAAAGTATCGTAAGGTGATTATTTCTTTTCAAAATTCCCATTCGGAATTAGATGCAG TAATGGGCTGGCGCCTGACA
Product: cyclase family protein
Products: NA
Alternate protein names: Cyclase; Polyketide Cyclase; Cyclase Superfamily Protein
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPLPFPKFRLLDLSVTLANNPFTDPPGYGPEIVYLDHDRGADDFAKIFPGLAKEDFPGGEGPAAELLHVSAHNGTHMDAP WHYASTMDGGAPASTIEQLPLEWCFQPGVKLDFRQMPDGHIVTAADIAAELDRIGHELAPLDIVVVNTAAGARYGQPGYI DVGCGMGREATLYLLERGVRVVGTDAWSWDPPFSFTRQRYLETGDASLIWEGHKAGRDIGYGQMEKLTNLDLLPPDGFWI SCFPYKIERGSAGFIRAVAFLPE
Sequences:
>Translated_263_residues MPLPFPKFRLLDLSVTLANNPFTDPPGYGPEIVYLDHDRGADDFAKIFPGLAKEDFPGGEGPAAELLHVSAHNGTHMDAP WHYASTMDGGAPASTIEQLPLEWCFQPGVKLDFRQMPDGHIVTAADIAAELDRIGHELAPLDIVVVNTAAGARYGQPGYI DVGCGMGREATLYLLERGVRVVGTDAWSWDPPFSFTRQRYLETGDASLIWEGHKAGRDIGYGQMEKLTNLDLLPPDGFWI SCFPYKIERGSAGFIRAVAFLPE >Mature_262_residues PLPFPKFRLLDLSVTLANNPFTDPPGYGPEIVYLDHDRGADDFAKIFPGLAKEDFPGGEGPAAELLHVSAHNGTHMDAPW HYASTMDGGAPASTIEQLPLEWCFQPGVKLDFRQMPDGHIVTAADIAAELDRIGHELAPLDIVVVNTAAGARYGQPGYID VGCGMGREATLYLLERGVRVVGTDAWSWDPPFSFTRQRYLETGDASLIWEGHKAGRDIGYGQMEKLTNLDLLPPDGFWIS CFPYKIERGSAGFIRAVAFLPE
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28801; Mature: 28670
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPFPKFRLLDLSVTLANNPFTDPPGYGPEIVYLDHDRGADDFAKIFPGLAKEDFPGGE CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCC GPAAELLHVSAHNGTHMDAPWHYASTMDGGAPASTIEQLPLEWCFQPGVKLDFRQMPDGH CCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCEEEHEECCCCC IVTAADIAAELDRIGHELAPLDIVVVNTAAGARYGQPGYIDVGCGMGREATLYLLERGVR EEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE VVGTDAWSWDPPFSFTRQRYLETGDASLIWEGHKAGRDIGYGQMEKLTNLDLLPPDGFWI EEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEE SCFPYKIERGSAGFIRAVAFLPE EEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure PLPFPKFRLLDLSVTLANNPFTDPPGYGPEIVYLDHDRGADDFAKIFPGLAKEDFPGGE CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCC GPAAELLHVSAHNGTHMDAPWHYASTMDGGAPASTIEQLPLEWCFQPGVKLDFRQMPDGH CCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCEEEHEECCCCC IVTAADIAAELDRIGHELAPLDIVVVNTAAGARYGQPGYIDVGCGMGREATLYLLERGVR EEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE VVGTDAWSWDPPFSFTRQRYLETGDASLIWEGHKAGRDIGYGQMEKLTNLDLLPPDGFWI EEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEE SCFPYKIERGSAGFIRAVAFLPE EEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA