Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yetM [H]
Identifier: 154246334
GI number: 154246334
Start: 2670516
End: 2671646
Strand: Direct
Name: yetM [H]
Synonym: Xaut_2393
Alternate gene names: 154246334
Gene position: 2670516-2671646 (Clockwise)
Preceding gene: 154246333
Following gene: 154246335
Centisome position: 50.3
GC content: 65.96
Gene sequence:
>1131_bases ATGCCGGTGAGCTGCAAACGCATCCTAATCATCGGCGGCGGCTTCTCGGGCATGGCCGCGGCCATCGAACTGCGGAAGCG CGGCGCGGCCATCGATGTAGTCGAGATCGATCCCGGCTGGCGCACATATGGCGCGGGCATTACGTTGGGCGCGCCCACGC TCCGCGCTTTAGACACGCTGGGCGTTCTTGATGAATTCCTCCAGCATGGCTACGCATCGGACGAGACCGAATTGCTCTCC AGCGCAGGGCATCCGATCGCCCGGCTGCCGACACCGCGCCTGGCGCGGTCGGATGTTCCGGGAGCAGGGGCGATCATGCG CCCCGTCCTGGCCCGCATCCTGGCGCAGGTGACCCTGCGCTCCGGAGCTGAGGTGCGGCTCGGCGTCACCTTCAAGACGA TCGCGCAGACCGACGCCGGCGTGGACGTTACCTTCAGCGACGGCACGCGCGGCACCTATGATCTCGTCGTCGGAGCCGAT GGCCTGTATTCGAAGACCCGCAGCATCCTTTATCCTGCTGCGCCCGCGCCGCGCTACACTGGGCAGTGCGTCTGGCGTGC CGTGCTACCGCGGCCGCCAGAGGTGTCCAAGGCGATCATGTGGCTGGGCGCCAAGGTCAAGGCGGGCGTCAACCCGGTCT CGCGGGAGGAGATGTACCTGTTCGTCACCGAGGATCGCCCCTCGAATGACCGGGTCGACCCTGCGGATTTCCTGAAGTTG CTCAAGGCGTTGATCGTCCCATTCACCGCGCCCGTCATGCAGATGGTGCGCGAGAGCCTCAATGAGGCCTCGCAGATCGT CTATCGCCCGCTCGAAGCTCTGCTCTTGCCGCGGCCGTGGTCTCAAGGACGGGTAGCGCTGATCGGCGATGCCGCCCACG CCACCACGCCGCACCTTGCATCGGGAGCCTGCATCGGGATTGAGGACGCGATCGTGCTGGCCCAGGAACTGGAGCGCTGC GACAGCATCACGGACGGGCTCGCCGCCTTTGAAGCGCGGCGCTGGGAGCGCTGTCGGATGGTGGTTGAGAACTCGGTCCG GCTCGGCGAAATCGAGATTTCGGGCGGCAGTCCCGAAGAGCATGGGCAGATCATGCACCAATCGATGACGGCACTCGCTG CCCCGATCTAG
Upstream 100 bases:
>100_bases CTTGGCGCAGCGCTTGGCCTGTCGCTGGAAATGGTTTCGGTCACGGTCAATGCGGCCGGCGACGTACTTCTTGAACAAGA GAACAAGGGAGAGGAATGAC
Downstream 100 bases:
>100_bases GGGCTTGACCGCGTCAAGGGATCCCGCCGGAAGCGGGGTTCTCTTGCCGGAGATAATCAAACAAAATCAATGCTATGACG AGTATCGCGGCCCGCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPVSCKRILIIGGGFSGMAAAIELRKRGAAIDVVEIDPGWRTYGAGITLGAPTLRALDTLGVLDEFLQHGYASDETELLS SAGHPIARLPTPRLARSDVPGAGAIMRPVLARILAQVTLRSGAEVRLGVTFKTIAQTDAGVDVTFSDGTRGTYDLVVGAD GLYSKTRSILYPAAPAPRYTGQCVWRAVLPRPPEVSKAIMWLGAKVKAGVNPVSREEMYLFVTEDRPSNDRVDPADFLKL LKALIVPFTAPVMQMVRESLNEASQIVYRPLEALLLPRPWSQGRVALIGDAAHATTPHLASGACIGIEDAIVLAQELERC DSITDGLAAFEARRWERCRMVVENSVRLGEIEISGGSPEEHGQIMHQSMTALAAPI
Sequences:
>Translated_376_residues MPVSCKRILIIGGGFSGMAAAIELRKRGAAIDVVEIDPGWRTYGAGITLGAPTLRALDTLGVLDEFLQHGYASDETELLS SAGHPIARLPTPRLARSDVPGAGAIMRPVLARILAQVTLRSGAEVRLGVTFKTIAQTDAGVDVTFSDGTRGTYDLVVGAD GLYSKTRSILYPAAPAPRYTGQCVWRAVLPRPPEVSKAIMWLGAKVKAGVNPVSREEMYLFVTEDRPSNDRVDPADFLKL LKALIVPFTAPVMQMVRESLNEASQIVYRPLEALLLPRPWSQGRVALIGDAAHATTPHLASGACIGIEDAIVLAQELERC DSITDGLAAFEARRWERCRMVVENSVRLGEIEISGGSPEEHGQIMHQSMTALAAPI >Mature_375_residues PVSCKRILIIGGGFSGMAAAIELRKRGAAIDVVEIDPGWRTYGAGITLGAPTLRALDTLGVLDEFLQHGYASDETELLSS AGHPIARLPTPRLARSDVPGAGAIMRPVLARILAQVTLRSGAEVRLGVTFKTIAQTDAGVDVTFSDGTRGTYDLVVGADG LYSKTRSILYPAAPAPRYTGQCVWRAVLPRPPEVSKAIMWLGAKVKAGVNPVSREEMYLFVTEDRPSNDRVDPADFLKLL KALIVPFTAPVMQMVRESLNEASQIVYRPLEALLLPRPWSQGRVALIGDAAHATTPHLASGACIGIEDAIVLAQELERCD SITDGLAAFEARRWERCRMVVENSVRLGEIEISGGSPEEHGQIMHQSMTALAAPI
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 40425; Mature: 40294
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSCKRILIIGGGFSGMAAAIELRKRGAAIDVVEIDPGWRTYGAGITLGAPTLRALDTL CCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCEEECCCEEECCCHHHHHHHH GVLDEFLQHGYASDETELLSSAGHPIARLPTPRLARSDVPGAGAIMRPVLARILAQVTLR HHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHC SGAEVRLGVTFKTIAQTDAGVDVTFSDGTRGTYDLVVGADGLYSKTRSILYPAAPAPRYT CCCEEEEEEEEHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCC GQCVWRAVLPRPPEVSKAIMWLGAKVKAGVNPVSREEMYLFVTEDRPSNDRVDPADFLKL CHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LKALIVPFTAPVMQMVRESLNEASQIVYRPLEALLLPRPWSQGRVALIGDAAHATTPHLA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC SGACIGIEDAIVLAQELERCDSITDGLAAFEARRWERCRMVVENSVRLGEIEISGGSPEE CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHH HGQIMHQSMTALAAPI HHHHHHHHHHHHHCCC >Mature Secondary Structure PVSCKRILIIGGGFSGMAAAIELRKRGAAIDVVEIDPGWRTYGAGITLGAPTLRALDTL CCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCEEECCCEEECCCHHHHHHHH GVLDEFLQHGYASDETELLSSAGHPIARLPTPRLARSDVPGAGAIMRPVLARILAQVTLR HHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHC SGAEVRLGVTFKTIAQTDAGVDVTFSDGTRGTYDLVVGADGLYSKTRSILYPAAPAPRYT CCCEEEEEEEEHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCC GQCVWRAVLPRPPEVSKAIMWLGAKVKAGVNPVSREEMYLFVTEDRPSNDRVDPADFLKL CHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LKALIVPFTAPVMQMVRESLNEASQIVYRPLEALLLPRPWSQGRVALIGDAAHATTPHLA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC SGACIGIEDAIVLAQELERCDSITDGLAAFEARRWERCRMVVENSVRLGEIEISGGSPEE CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHH HGQIMHQSMTALAAPI HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]