Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154246330

Identifier: 154246330

GI number: 154246330

Start: 2667700

End: 2668872

Strand: Direct

Name: 154246330

Synonym: Xaut_2389

Alternate gene names: NA

Gene position: 2667700-2668872 (Clockwise)

Preceding gene: 154246329

Following gene: 154246332

Centisome position: 50.25

GC content: 64.54

Gene sequence:

>1173_bases
ATGTTCAAGTATTTCTCGAGTAATTATCCCTGGAACCTCGCTGTCGATCTGGCCATCGAGATGGGCGCCAAGATCGGCGA
GGTCGAGGCCATGTGCGGGCCACTCCAGGAGGCGGCGCGGCAGCCCGATGCGGCGGGTGTCGCCGCGTTCCGCCAAAGCT
GGTGCGACATGGCGGACAAGCTGTGTGCACTGGCCGAGGAGGACGAGGCGCGCGGGCGCACCATTTCGGCCGGCGACAAA
TATGGCCGTGCCGCCACCTATTATCTCACCGCCGAACGCCTGATGGCCCATGGCTCAGCCGGGCGGACGGCGCTTTATCG
GCGCTTCCTTGGCGTCTTTGAGCGCGGCATAGCGCTTGCCGGCGAGAATTGCCAGCGCGTCGAGATTCCCTACCACGGCG
GGCATCTCAGCGGCCTGTATGTGCGCGCCGAGGGGGCGGCCGGGCCGGCGCCGTTGCTGCTTCAGGTCAACGGCCTCGAT
TCAACTAAGGAAATGAAATACCGCGTCGGGCTGCCCCACTGGCTGGCGCGGCGCGGCGTGGCATCGCTGGTCGTCGATCA
GCCCGGCACCGGCGAAGCGTTGCGGTTGCATAATCTCACGGCGGTCTACAATGCGGAGGTCTGGGCCAGCCCGATCGTCG
ACTGGCTTGAGACGCTGGACGACGTTGATCCCAGGCGCATCGGCATGGAGGGTGTCTCGCTGGGGGGGTACTATTGCCCG
CGCGCCGTGGCCTTCGAGCCGCGCTTTGCCTGTGGCGTGGTGTGGGGCGCCAACCACGATTGGCGCGATGTCCAGAAGAA
GCGGCTCCAGCGCGAGGGCAATTTCCCCGTACCGCATTATTGGGACCACGTCCGCTGGGTCTGGGGTGCCCGTGACATGG
ACGATTTTGTGCGGATCGCAGAAGACGTCCATCTCGACGGCGTGCTCGATCGGATCAAGGTGCCGTTTCTGGTCACCCAC
GGAGAGAAGGATTCGCAGATTCCGCTCGTCTGGGCACAGCGGACCTATGATCAACTGGTCAACAGCCCAAAGCGTGAGCT
GAAGATCTTCACCGATCGCGAAGGCGGGTGTCAGCATTCCAGCTTCGACAATTCGGCCAATGCGGGCGCCTTTATCGCGG
ATTGGGTGGCCGAAGTGCTGGGCGGGCGCACCGCGGCCGAGGCGGCGGAATGA

Upstream 100 bases:

>100_bases
ACTGGCAATAATATTGCCGTATGTCACGCTCGCGCGGTCTGCTGGTGCCTGTGCGGTCACCTTGGATGCTGCTTCGGGTG
CGGTGGTGAGGGAGAGGGTG

Downstream 100 bases:

>100_bases
CCGTCGCGGAGCGGGCAACGGCGATGGTCCTCGCAAAGCAATCCGTGTTTACCCCGCTATCGGGCTCCCCGGCGCTGGTA
GGGGGTGAACACGAACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK
YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD
STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP
RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH
GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE

Sequences:

>Translated_390_residues
MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK
YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD
STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP
RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH
GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE
>Mature_390_residues
MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK
YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD
STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP
RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH
GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE

Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0255 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010520 [H]

Pfam domain/function: PF06500 DUF1100 [H]

EC number: NA

Molecular weight: Translated: 43281; Mature: 43281

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADK
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LCALAEEDEARGRTISAGDKYGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALA
HHHHCCCHHHCCCEECCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCEEC
GENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLDSTKEMKYRVGLPHWLARRGV
CCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCH
ASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP
HEEEECCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECC
RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIA
CEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCHHHHHHHH
EDVHLDGVLDRIKVPFLVTHGEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHS
HHHCHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCHHEEEEECCCCCCCCC
SFDNSANAGAFIADWVAEVLGGRTAAEAAE
CCCCCCCCCHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADK
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LCALAEEDEARGRTISAGDKYGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALA
HHHHCCCHHHCCCEECCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCEEC
GENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLDSTKEMKYRVGLPHWLARRGV
CCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCH
ASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP
HEEEECCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECC
RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIA
CEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCHHHHHHHH
EDVHLDGVLDRIKVPFLVTHGEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHS
HHHCHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCHHEEEEECCCCCCCCC
SFDNSANAGAFIADWVAEVLGGRTAAEAAE
CCCCCCCCCHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11514508; 12618462 [H]