Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246330
Identifier: 154246330
GI number: 154246330
Start: 2667700
End: 2668872
Strand: Direct
Name: 154246330
Synonym: Xaut_2389
Alternate gene names: NA
Gene position: 2667700-2668872 (Clockwise)
Preceding gene: 154246329
Following gene: 154246332
Centisome position: 50.25
GC content: 64.54
Gene sequence:
>1173_bases ATGTTCAAGTATTTCTCGAGTAATTATCCCTGGAACCTCGCTGTCGATCTGGCCATCGAGATGGGCGCCAAGATCGGCGA GGTCGAGGCCATGTGCGGGCCACTCCAGGAGGCGGCGCGGCAGCCCGATGCGGCGGGTGTCGCCGCGTTCCGCCAAAGCT GGTGCGACATGGCGGACAAGCTGTGTGCACTGGCCGAGGAGGACGAGGCGCGCGGGCGCACCATTTCGGCCGGCGACAAA TATGGCCGTGCCGCCACCTATTATCTCACCGCCGAACGCCTGATGGCCCATGGCTCAGCCGGGCGGACGGCGCTTTATCG GCGCTTCCTTGGCGTCTTTGAGCGCGGCATAGCGCTTGCCGGCGAGAATTGCCAGCGCGTCGAGATTCCCTACCACGGCG GGCATCTCAGCGGCCTGTATGTGCGCGCCGAGGGGGCGGCCGGGCCGGCGCCGTTGCTGCTTCAGGTCAACGGCCTCGAT TCAACTAAGGAAATGAAATACCGCGTCGGGCTGCCCCACTGGCTGGCGCGGCGCGGCGTGGCATCGCTGGTCGTCGATCA GCCCGGCACCGGCGAAGCGTTGCGGTTGCATAATCTCACGGCGGTCTACAATGCGGAGGTCTGGGCCAGCCCGATCGTCG ACTGGCTTGAGACGCTGGACGACGTTGATCCCAGGCGCATCGGCATGGAGGGTGTCTCGCTGGGGGGGTACTATTGCCCG CGCGCCGTGGCCTTCGAGCCGCGCTTTGCCTGTGGCGTGGTGTGGGGCGCCAACCACGATTGGCGCGATGTCCAGAAGAA GCGGCTCCAGCGCGAGGGCAATTTCCCCGTACCGCATTATTGGGACCACGTCCGCTGGGTCTGGGGTGCCCGTGACATGG ACGATTTTGTGCGGATCGCAGAAGACGTCCATCTCGACGGCGTGCTCGATCGGATCAAGGTGCCGTTTCTGGTCACCCAC GGAGAGAAGGATTCGCAGATTCCGCTCGTCTGGGCACAGCGGACCTATGATCAACTGGTCAACAGCCCAAAGCGTGAGCT GAAGATCTTCACCGATCGCGAAGGCGGGTGTCAGCATTCCAGCTTCGACAATTCGGCCAATGCGGGCGCCTTTATCGCGG ATTGGGTGGCCGAAGTGCTGGGCGGGCGCACCGCGGCCGAGGCGGCGGAATGA
Upstream 100 bases:
>100_bases ACTGGCAATAATATTGCCGTATGTCACGCTCGCGCGGTCTGCTGGTGCCTGTGCGGTCACCTTGGATGCTGCTTCGGGTG CGGTGGTGAGGGAGAGGGTG
Downstream 100 bases:
>100_bases CCGTCGCGGAGCGGGCAACGGCGATGGTCCTCGCAAAGCAATCCGTGTTTACCCCGCTATCGGGCTCCCCGGCGCTGGTA GGGGGTGAACACGAACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE
Sequences:
>Translated_390_residues MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE >Mature_390_residues MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADKLCALAEEDEARGRTISAGDK YGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALAGENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLD STKEMKYRVGLPHWLARRGVASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIAEDVHLDGVLDRIKVPFLVTH GEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHSSFDNSANAGAFIADWVAEVLGGRTAAEAAE
Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010520 [H]
Pfam domain/function: PF06500 DUF1100 [H]
EC number: NA
Molecular weight: Translated: 43281; Mature: 43281
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADK CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LCALAEEDEARGRTISAGDKYGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALA HHHHCCCHHHCCCEECCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCEEC GENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLDSTKEMKYRVGLPHWLARRGV CCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCH ASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP HEEEECCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECC RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIA CEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCHHHHHHHH EDVHLDGVLDRIKVPFLVTHGEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHS HHHCHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCHHEEEEECCCCCCCCC SFDNSANAGAFIADWVAEVLGGRTAAEAAE CCCCCCCCCHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MFKYFSSNYPWNLAVDLAIEMGAKIGEVEAMCGPLQEAARQPDAAGVAAFRQSWCDMADK CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LCALAEEDEARGRTISAGDKYGRAATYYLTAERLMAHGSAGRTALYRRFLGVFERGIALA HHHHCCCHHHCCCEECCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCEEC GENCQRVEIPYHGGHLSGLYVRAEGAAGPAPLLLQVNGLDSTKEMKYRVGLPHWLARRGV CCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCH ASLVVDQPGTGEALRLHNLTAVYNAEVWASPIVDWLETLDDVDPRRIGMEGVSLGGYYCP HEEEECCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECC RAVAFEPRFACGVVWGANHDWRDVQKKRLQREGNFPVPHYWDHVRWVWGARDMDDFVRIA CEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCHHHHHHHH EDVHLDGVLDRIKVPFLVTHGEKDSQIPLVWAQRTYDQLVNSPKRELKIFTDREGGCQHS HHHCHHHHHHHHCCCEEEECCCCCCCCCEEEHHHHHHHHHCCCCHHEEEEECCCCCCCCC SFDNSANAGAFIADWVAEVLGGRTAAEAAE CCCCCCCCCHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11514508; 12618462 [H]