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The map label for this gene is yfdH [C]

Identifier: 154246294

GI number: 154246294

Start: 2625399

End: 2626490

Strand: Reverse

Name: yfdH [C]

Synonym: Xaut_2352

Alternate gene names: 154246294

Gene position: 2626490-2625399 (Counterclockwise)

Preceding gene: 154246296

Following gene: 154246293

Centisome position: 49.47

GC content: 69.41

Gene sequence:

>1092_bases
ATGAGTTTGCATTCTTTGCGCGTGCCCGGCGGAAGTATCATGACACCTGATCTCAGCATCGTCGTTCCGCTCTACAACGA
GGCCGAAGGCCTGCCCTTCTTCCATGCCAACCTGAGCGCCGCCGCCGCCGCCGAAGCGCGGGCCCGCGGGCTCACCATGG
AAATCGTCTATGTGGACGACGGCAGCCGCGACGGCAGTGCCGCGCTCGCCGCCAACCTGCCGGTGCTGGGCATCGACATC
CAGGTGGTGGCGCTGTCGCGCAACTTCGGCAAGGAGGCCGCCCTCATGGCCGGCCTCGACCATGCCCGCGGCGACGCGGT
GATGTTCATGGACGGCGACGGCCAGCATCCGCCGGAGATGATCCCCACCTTCCTGCGCCTGTGGAAGGACGAGGGCTACG
ACGTGGCCTATGCGGTGAAGGCCGACCGCTCCGACGAGGCGGCGAGCCGGCGCCTGTTCGTGCGCGCCTTCTACAAGCTT
CTGAATTTCGGCGCCGCCACCGCCATCCCGGAGGATGCGGCGGACTTCCGTATCCTGTCCCCGCGCGCCGCCGCCGCCTT
GCGGCGCATGCCCGAGCGCAACCGCTTCTTCAAGGGCCTGTCGAGCTGGATCGGCTTCCGCCAGATCGCGGTGCCCTACC
GGCCGGCGCCGCGCGCCCACGGCTCCACCTCCTGGAGCTTCCTGCGGCTGCTCGGCCTGTCTATGGAGGCCCTGACTTCG
TTCTCGCCGGCGCCGCTGCGCCTTGCCGCTGCGTTCGGCGCCATATTGGCGGGCCTCGCCCTGTTCTATGGCAGCTGGAT
CGTGGTGGAACGGCTCGTCTGGGGCATCCCGCTGCCGGGCTATCCCTCCATCGTGGTGGGCCTGATGGTGATCGGCGGCA
CGCAGCTTCTGGTGATGGGGCTGATGGGCGAGTACATCGCCCGCATCCTCTCCGAGATCAAGGCGCGCCCGGTCTATTAC
GTGGCCGACCACGTGCTCAACCGCGCCGCGGCCGACGCCGCCGGCCACCCGCTGGCGGGACAGCCCATAGTCGGGCAGTC
CTTCGCGGGCCCCGGCCACCCCTCGGCGCTGGCGTCGAGGGCCGAGCCATGA

Upstream 100 bases:

>100_bases
TGGGGGGAATGATCGAGCTGACCCGTTAACGCGGAGGAACAGCGGAGGTTCCGCATCCTCGCAAAAATTTTCTGCTCCCT
TTCGGGGCGGAGGCGGCTAG

Downstream 100 bases:

>100_bases
AGCATGTGGTGCTCTGCGCCGACGACTACGCCATCTCGCCCGGCGTGTCGGAGGCCATCCGCCGGCTGATCACGGCGCGC
CGGATCAACGCCACCTCGGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSLHSLRVPGGSIMTPDLSIVVPLYNEAEGLPFFHANLSAAAAAEARARGLTMEIVYVDDGSRDGSAALAANLPVLGIDI
QVVALSRNFGKEAALMAGLDHARGDAVMFMDGDGQHPPEMIPTFLRLWKDEGYDVAYAVKADRSDEAASRRLFVRAFYKL
LNFGAATAIPEDAADFRILSPRAAAALRRMPERNRFFKGLSSWIGFRQIAVPYRPAPRAHGSTSWSFLRLLGLSMEALTS
FSPAPLRLAAAFGAILAGLALFYGSWIVVERLVWGIPLPGYPSIVVGLMVIGGTQLLVMGLMGEYIARILSEIKARPVYY
VADHVLNRAAADAAGHPLAGQPIVGQSFAGPGHPSALASRAEP

Sequences:

>Translated_363_residues
MSLHSLRVPGGSIMTPDLSIVVPLYNEAEGLPFFHANLSAAAAAEARARGLTMEIVYVDDGSRDGSAALAANLPVLGIDI
QVVALSRNFGKEAALMAGLDHARGDAVMFMDGDGQHPPEMIPTFLRLWKDEGYDVAYAVKADRSDEAASRRLFVRAFYKL
LNFGAATAIPEDAADFRILSPRAAAALRRMPERNRFFKGLSSWIGFRQIAVPYRPAPRAHGSTSWSFLRLLGLSMEALTS
FSPAPLRLAAAFGAILAGLALFYGSWIVVERLVWGIPLPGYPSIVVGLMVIGGTQLLVMGLMGEYIARILSEIKARPVYY
VADHVLNRAAADAAGHPLAGQPIVGQSFAGPGHPSALASRAEP
>Mature_362_residues
SLHSLRVPGGSIMTPDLSIVVPLYNEAEGLPFFHANLSAAAAAEARARGLTMEIVYVDDGSRDGSAALAANLPVLGIDIQ
VVALSRNFGKEAALMAGLDHARGDAVMFMDGDGQHPPEMIPTFLRLWKDEGYDVAYAVKADRSDEAASRRLFVRAFYKLL
NFGAATAIPEDAADFRILSPRAAAALRRMPERNRFFKGLSSWIGFRQIAVPYRPAPRAHGSTSWSFLRLLGLSMEALTSF
SPAPLRLAAAFGAILAGLALFYGSWIVVERLVWGIPLPGYPSIVVGLMVIGGTQLLVMGLMGEYIARILSEIKARPVYYV
ADHVLNRAAADAAGHPLAGQPIVGQSFAGPGHPSALASRAEP

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=120, Percent_Identity=34.1666666666667, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=37.5, Blast_Score=227, Evalue=8e-61,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=32.0512820512821, Blast_Score=158, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6325441, Length=122, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585265, Length=120, Percent_Identity=32.5, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38851; Mature: 38720

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHSLRVPGGSIMTPDLSIVVPLYNEAEGLPFFHANLSAAAAAEARARGLTMEIVYVDD
CCCCCEECCCCCEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEEC
GSRDGSAALAANLPVLGIDIQVVALSRNFGKEAALMAGLDHARGDAVMFMDGDGQHPPEM
CCCCCCEEEEECCCEEECEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
IPTFLRLWKDEGYDVAYAVKADRSDEAASRRLFVRAFYKLLNFGAATAIPEDAADFRILS
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
PRAAAALRRMPERNRFFKGLSSWIGFRQIAVPYRPAPRAHGSTSWSFLRLLGLSMEALTS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHC
FSPAPLRLAAAFGAILAGLALFYGSWIVVERLVWGIPLPGYPSIVVGLMVIGGTQLLVMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
LMGEYIARILSEIKARPVYYVADHVLNRAAADAAGHPLAGQPIVGQSFAGPGHPSALASR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AEP
CCC
>Mature Secondary Structure 
SLHSLRVPGGSIMTPDLSIVVPLYNEAEGLPFFHANLSAAAAAEARARGLTMEIVYVDD
CCCCEECCCCCEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEEC
GSRDGSAALAANLPVLGIDIQVVALSRNFGKEAALMAGLDHARGDAVMFMDGDGQHPPEM
CCCCCCEEEEECCCEEECEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
IPTFLRLWKDEGYDVAYAVKADRSDEAASRRLFVRAFYKLLNFGAATAIPEDAADFRILS
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
PRAAAALRRMPERNRFFKGLSSWIGFRQIAVPYRPAPRAHGSTSWSFLRLLGLSMEALTS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHC
FSPAPLRLAAAFGAILAGLALFYGSWIVVERLVWGIPLPGYPSIVVGLMVIGGTQLLVMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
LMGEYIARILSEIKARPVYYVADHVLNRAAADAAGHPLAGQPIVGQSFAGPGHPSALASR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AEP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]