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The map label for this gene is fdx4 [H]

Identifier: 154246274

GI number: 154246274

Start: 2605766

End: 2606119

Strand: Direct

Name: fdx4 [H]

Synonym: Xaut_2332

Alternate gene names: 154246274

Gene position: 2605766-2606119 (Clockwise)

Preceding gene: 154246273

Following gene: 154246278

Centisome position: 49.08

GC content: 64.97

Gene sequence:

>354_bases
ATGTCCGAAGCTGCTGAAAGCGAAGTTCTCGATATCCCGCAGGTCTATACGCACCACGTGTTCTGCTGCTTCACCCAGCG
GCCGCCGCAGCATCCGCGCGGCTCGTGCGGGGCCAATGGCGCGGCGCCCCTTTGGGACCGTCTCGCCAAGAAGCTGGAGG
CGTCGGGCCGTCGCGACATCGCCATGACCTCCGCCGGCTGTCTCAGCTTCTGCCAGGCCGGCCCCATCATGGTCGTCTAT
CCGCAGGGCATCTGGTACACGCCCAAGTCCCCGGAAGACATTGACGAGATCGTCACCTCCCACCTCCTCGGCGGCAAGCC
GGTGGAACGGCTGATCATCGTTCCGCGCATCTGA

Upstream 100 bases:

>100_bases
TCGCACTAATATAATGGTGTAACGAGACTTTTCAGGCTCTGGCAGATCCGGCACACATTTTGAATGGCTCCAGACCAGCC
CCACCGAGCCGTGAGCCGTC

Downstream 100 bases:

>100_bases
ATCATGCCTGACGGCGCCGCCCAGCGGGGCCGTCAGGAGCGTTCGGCGAGGCGGAAGGTGAGCCGCACGCAGGTGCCCTT
GTCCCGCGCATCCAGGGTGG

Product: ferredoxin, 2Fe-2S (AaFd4)

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSEAAESEVLDIPQVYTHHVFCCFTQRPPQHPRGSCGANGAAPLWDRLAKKLEASGRRDIAMTSAGCLSFCQAGPIMVVY
PQGIWYTPKSPEDIDEIVTSHLLGGKPVERLIIVPRI

Sequences:

>Translated_117_residues
MSEAAESEVLDIPQVYTHHVFCCFTQRPPQHPRGSCGANGAAPLWDRLAKKLEASGRRDIAMTSAGCLSFCQAGPIMVVY
PQGIWYTPKSPEDIDEIVTSHLLGGKPVERLIIVPRI
>Mature_116_residues
SEAAESEVLDIPQVYTHHVFCCFTQRPPQHPRGSCGANGAAPLWDRLAKKLEASGRRDIAMTSAGCLSFCQAGPIMVVYP
QGIWYTPKSPEDIDEIVTSHLLGGKPVERLIIVPRI

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12831; Mature: 12700

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAAESEVLDIPQVYTHHVFCCFTQRPPQHPRGSCGANGAAPLWDRLAKKLEASGRRDI
CCCCCCCHHCCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
AMTSAGCLSFCQAGPIMVVYPQGIWYTPKSPEDIDEIVTSHLLGGKPVERLIIVPRI
EECHHHHHHHHCCCCEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCC
>Mature Secondary Structure 
SEAAESEVLDIPQVYTHHVFCCFTQRPPQHPRGSCGANGAAPLWDRLAKKLEASGRRDI
CCCCCCHHCCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
AMTSAGCLSFCQAGPIMVVYPQGIWYTPKSPEDIDEIVTSHLLGGKPVERLIIVPRI
EECHHHHHHHHCCCCEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]