Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246260
Identifier: 154246260
GI number: 154246260
Start: 2589059
End: 2591584
Strand: Reverse
Name: 154246260
Synonym: Xaut_2318
Alternate gene names: NA
Gene position: 2591584-2589059 (Counterclockwise)
Preceding gene: 154246261
Following gene: 154246258
Centisome position: 48.82
GC content: 70.03
Gene sequence:
>2526_bases ATGACGCGACTCTGGACCGGCGTCTCGGCCGCCGTCCTCTCCGCCGCCCTGCTCTGGAGCACGAGCGGCCAGGCCCAGCC CGCACCGGCGTCCCAGGGCCAGGATGCAGCCGGCCAGCAGGCGCCCCTAGCGTGGCCGCGGGACTTTCCTCTCCCCGGCG ATCAGCTGCTCCAGCTCTACCAGCCCCAGATCGACAGCTGGACCGGCGATGTGATGTCCGGCCGCGCGGCAGTGGCCATC GGCCCCAAGTCCGGCACGCCCACCTACGGCATGGTGCGATTCTCGGCCCGCGTCGCCGTCGACAAGCCGGCCGGCCTCGT CCACCTCGCCACCATCTCCATCGAAGGGGTGGAGGTGCCCACCGAGCCGGCCAAGGCCTCCCTCATCCGCTCCACGCTTC AGTCGCGCCTGCCGGCCAACGGCATGACCGTGCCGCTCGACCAGTTGCAGGCGAGCTACGCGGTGAACCAGGAACTGGCG AAGCTCAAGTCCCAGCCGGTGGACAACACCCCGCCCCAGATCCTGTTCGCCACCACCACCACCGTGCTGGTGCCCGTGGC TGGCACGCCGGTGCTGCGGCCCATCTCCGGCGCGCCCACCTTCCAGCGCGTGGCCAACACCCGCCCGCTGCTGCTGCTTG ACGAGGCCGGCACCTATCATCTGGAGGCGGGCGGCCACTGGTATGAGAGCCCCAGCCTCACCGGCACCTGGATCCTGACG CCGCAGATTTCGGATGCGCTCTCCGCCGCCGCCAAGGCCGCGACCCAGGAGCAGGCCGCCGACCCGCTGCTCGACGCCAA GGGCAAGCCCATCAATCCGGCCCCCGCCATCCTCGTCGCCACCCAGCCGGCGGAACTGATCCAGTCCAACGGCCCGCCGC AGATGCTGCCGGTGGCCGGCACCAACCTGCTGTCCATGAACAATGCCGACCACGCGGTGTTCATGGAGACCACCTCCAAC ACCTATTACATCCTGCTCTCCGGCCGCTGGTTCCGCGCGCCCGACCTCAAGGGGCCCTGGGCCTTCGTGGCCAGCGATGC GCTGCCGAAGGATTTCGCGAAGATCTCGCCCAATGATCCCAAGGCCAACGTGCTGGTCTCGGTGGCCGGCACGCCGCAGG CCAAGGAGGCGGTGATCGCCGCCACCATCCCGCAGACCGCCACCGTGAAGCGGGACGTGCCCCTGAAGGTGGCCTTCGAT GGGGCGCCGCGCTTCGAGCCCATCCCCGGCACCGGCCTCCACTACGCCATCAACACCCCGACGCCGGTGATCCAGCTCGA TACCGAGCGCTATTATGCGGTGAACAACGGCATCTGGTTCGTCGCCGAGACCGCCACCGGCCCGTGGCGCGTGGCCGACG TGGTGCCGGACGTGATCTACACGATCCCGGTCTCCTCGCCGCTCCATTACGTCACCTATGTGCGGATCTATGCCTCCACC CCGGAAGCGGTGGTGGTGGGCTATACGCCGGGCTACATGGGCGTTGTCGTCGCGCCGGGCGGCACCGTGGTCTACGGCAC CGGCTACACCTGCCCGGGCTATGTGGGCACCTACTGGTTCTCCTGCCCGGTCACCTATGGCGTCGGCGCCGGCTTCGCCC TCGGCGTGGCGGACGGCTTTGCCTTCGGCTTCGCCGCCGGCTGGCCCTGGGGCGCGGCGGTGACGCCCTATTGGGGTCCG TACTGGCACCCCTACGGCCCCTATCCCTATGGTCCTTATGGCCCTTGGGGTGGCCACTGGGGCTATACCAACATCAACCA GACCAATCTCTATGGCCGCTGGGGCGGCGCCGCCACGGTGAACCACGCCTGGGGCACCACCTGGAACGGCACCGAATGGT CCGGCCGCGACTGGCACGGCACCACCGCGGGCGGCACCGGCTTCACCGGCCGCTCGGCCGCCGCGTTCAATCCCTATACG GGCAACTACGCCGCCGGCGCCGAGAATGCCCGCTACAATCCCACCACCGGCGCCCGGGGCGAATCCCGCGCCGGGGTGGA AGGCAACGCCTATACGGGCAATGCCGCCGCAGGCCGCGAATCGGCGGGCTTCAACCCCACAACCGGCACCGGCCACGCCT CCCAGACCGCTGTTACCGACCATGACGGCAAGGTGAGCGTGGACAGCCGGGGGGTCGCCGGCAACGTGAAGACCGGCAAC GCGGTCGCCTGGAACAACGGCCACGTGGCCGTGGACCATGACGGCAACGTCTACCAGCACAGCGACACCGGCTGGGCCAA GAACACCGGCTCGGGCTGGCAGAACGTGGACCGCACCGCCGACACCAGCCGCCTCGACGCGGAAGAGCATGCCCGTTCCG TGAGCCAGCAGCGGGTGTCGAGCTACGGCGGCGACCACTACGGCGGTGAAGGCTACGGCGGCGGCGAACGCTTCGGTGGC GGCTTCGAGGGCGGCGAGCGTTATGGCTCGGGCGGCTTCGACCGGGGCTTCGGCGGATTCGGCGGCGGCGACCGCTTCGG TGGTGGAGGCTTCCGGGGCGGCTTCGGCGGCGGCTTCCGTCGCTGA
Upstream 100 bases:
>100_bases AATGGAACGGTGGTTAGCGCCGCCTCAAGGTACCGCTGACGCTTGCCTGAGAACATGCTAGTCGTCCTGCCGCCCCGACG GATCGGAAGGAAGTGACTTC
Downstream 100 bases:
>100_bases GTTGATCGGACGGGCCGGCGAGCAGCACGCCCGTCCCTCGACTCCCGGAAAGCGAGCACCCCGCGACTTCCGGGCCGGGG GTGCTCCGCTATCCTCGGTC
Product: carbohydrate-binding family V/XII protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 841; Mature: 840
Protein sequence:
>841_residues MTRLWTGVSAAVLSAALLWSTSGQAQPAPASQGQDAAGQQAPLAWPRDFPLPGDQLLQLYQPQIDSWTGDVMSGRAAVAI GPKSGTPTYGMVRFSARVAVDKPAGLVHLATISIEGVEVPTEPAKASLIRSTLQSRLPANGMTVPLDQLQASYAVNQELA KLKSQPVDNTPPQILFATTTTVLVPVAGTPVLRPISGAPTFQRVANTRPLLLLDEAGTYHLEAGGHWYESPSLTGTWILT PQISDALSAAAKAATQEQAADPLLDAKGKPINPAPAILVATQPAELIQSNGPPQMLPVAGTNLLSMNNADHAVFMETTSN TYYILLSGRWFRAPDLKGPWAFVASDALPKDFAKISPNDPKANVLVSVAGTPQAKEAVIAATIPQTATVKRDVPLKVAFD GAPRFEPIPGTGLHYAINTPTPVIQLDTERYYAVNNGIWFVAETATGPWRVADVVPDVIYTIPVSSPLHYVTYVRIYAST PEAVVVGYTPGYMGVVVAPGGTVVYGTGYTCPGYVGTYWFSCPVTYGVGAGFALGVADGFAFGFAAGWPWGAAVTPYWGP YWHPYGPYPYGPYGPWGGHWGYTNINQTNLYGRWGGAATVNHAWGTTWNGTEWSGRDWHGTTAGGTGFTGRSAAAFNPYT GNYAAGAENARYNPTTGARGESRAGVEGNAYTGNAAAGRESAGFNPTTGTGHASQTAVTDHDGKVSVDSRGVAGNVKTGN AVAWNNGHVAVDHDGNVYQHSDTGWAKNTGSGWQNVDRTADTSRLDAEEHARSVSQQRVSSYGGDHYGGEGYGGGERFGG GFEGGERYGSGGFDRGFGGFGGGDRFGGGGFRGGFGGGFRR
Sequences:
>Translated_841_residues MTRLWTGVSAAVLSAALLWSTSGQAQPAPASQGQDAAGQQAPLAWPRDFPLPGDQLLQLYQPQIDSWTGDVMSGRAAVAI GPKSGTPTYGMVRFSARVAVDKPAGLVHLATISIEGVEVPTEPAKASLIRSTLQSRLPANGMTVPLDQLQASYAVNQELA KLKSQPVDNTPPQILFATTTTVLVPVAGTPVLRPISGAPTFQRVANTRPLLLLDEAGTYHLEAGGHWYESPSLTGTWILT PQISDALSAAAKAATQEQAADPLLDAKGKPINPAPAILVATQPAELIQSNGPPQMLPVAGTNLLSMNNADHAVFMETTSN TYYILLSGRWFRAPDLKGPWAFVASDALPKDFAKISPNDPKANVLVSVAGTPQAKEAVIAATIPQTATVKRDVPLKVAFD GAPRFEPIPGTGLHYAINTPTPVIQLDTERYYAVNNGIWFVAETATGPWRVADVVPDVIYTIPVSSPLHYVTYVRIYAST PEAVVVGYTPGYMGVVVAPGGTVVYGTGYTCPGYVGTYWFSCPVTYGVGAGFALGVADGFAFGFAAGWPWGAAVTPYWGP YWHPYGPYPYGPYGPWGGHWGYTNINQTNLYGRWGGAATVNHAWGTTWNGTEWSGRDWHGTTAGGTGFTGRSAAAFNPYT GNYAAGAENARYNPTTGARGESRAGVEGNAYTGNAAAGRESAGFNPTTGTGHASQTAVTDHDGKVSVDSRGVAGNVKTGN AVAWNNGHVAVDHDGNVYQHSDTGWAKNTGSGWQNVDRTADTSRLDAEEHARSVSQQRVSSYGGDHYGGEGYGGGERFGG GFEGGERYGSGGFDRGFGGFGGGDRFGGGGFRGGFGGGFRR >Mature_840_residues TRLWTGVSAAVLSAALLWSTSGQAQPAPASQGQDAAGQQAPLAWPRDFPLPGDQLLQLYQPQIDSWTGDVMSGRAAVAIG PKSGTPTYGMVRFSARVAVDKPAGLVHLATISIEGVEVPTEPAKASLIRSTLQSRLPANGMTVPLDQLQASYAVNQELAK LKSQPVDNTPPQILFATTTTVLVPVAGTPVLRPISGAPTFQRVANTRPLLLLDEAGTYHLEAGGHWYESPSLTGTWILTP QISDALSAAAKAATQEQAADPLLDAKGKPINPAPAILVATQPAELIQSNGPPQMLPVAGTNLLSMNNADHAVFMETTSNT YYILLSGRWFRAPDLKGPWAFVASDALPKDFAKISPNDPKANVLVSVAGTPQAKEAVIAATIPQTATVKRDVPLKVAFDG APRFEPIPGTGLHYAINTPTPVIQLDTERYYAVNNGIWFVAETATGPWRVADVVPDVIYTIPVSSPLHYVTYVRIYASTP EAVVVGYTPGYMGVVVAPGGTVVYGTGYTCPGYVGTYWFSCPVTYGVGAGFALGVADGFAFGFAAGWPWGAAVTPYWGPY WHPYGPYPYGPYGPWGGHWGYTNINQTNLYGRWGGAATVNHAWGTTWNGTEWSGRDWHGTTAGGTGFTGRSAAAFNPYTG NYAAGAENARYNPTTGARGESRAGVEGNAYTGNAAAGRESAGFNPTTGTGHASQTAVTDHDGKVSVDSRGVAGNVKTGNA VAWNNGHVAVDHDGNVYQHSDTGWAKNTGSGWQNVDRTADTSRLDAEEHARSVSQQRVSSYGGDHYGGEGYGGGERFGGG FEGGERYGSGGFDRGFGGFGGGDRFGGGGFRGGFGGGFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88291; Mature: 88159
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLWTGVSAAVLSAALLWSTSGQAQPAPASQGQDAAGQQAPLAWPRDFPLPGDQLLQLY CCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QPQIDSWTGDVMSGRAAVAIGPKSGTPTYGMVRFSARVAVDKPAGLVHLATISIEGVEVP CCCCCCCCCHHHCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCC TEPAKASLIRSTLQSRLPANGMTVPLDQLQASYAVNQELAKLKSQPVDNTPPQILFATTT CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE TVLVPVAGTPVLRPISGAPTFQRVANTRPLLLLDEAGTYHLEAGGHWYESPSLTGTWILT EEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEECCCCEECCCCCCEEEEEC PQISDALSAAAKAATQEQAADPLLDAKGKPINPAPAILVATQPAELIQSNGPPQMLPVAG CCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEECC TNLLSMNNADHAVFMETTSNTYYILLSGRWFRAPDLKGPWAFVASDALPKDFAKISPNDP CEEEEECCCCCEEEEEECCCEEEEEEECCEEECCCCCCCEEEEECCCCCHHHHHCCCCCC KANVLVSVAGTPQAKEAVIAATIPQTATVKRDVPLKVAFDGAPRFEPIPGTGLHYAINTP CCEEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEECCC TPVIQLDTERYYAVNNGIWFVAETATGPWRVADVVPDVIYTIPVSSPLHYVTYVRIYAST CCEEEECCCEEEEEECCEEEEEECCCCCEEHHHHCCCEEEEECCCCCCEEEEEEEEEECC PEAVVVGYTPGYMGVVVAPGGTVVYGTGYTCPGYVGTYWFSCPVTYGVGAGFALGVADGF CCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCEEECCCCCEEEEHHCCH AFGFAAGWPWGAAVTPYWGPYWHPYGPYPYGPYGPWGGHWGYTNINQTNLYGRWGGAATV HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE NHAWGTTWNGTEWSGRDWHGTTAGGTGFTGRSAAAFNPYTGNYAAGAENARYNPTTGARG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESRAGVEGNAYTGNAAAGRESAGFNPTTGTGHASQTAVTDHDGKVSVDSRGVAGNVKTGN CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCC AVAWNNGHVAVDHDGNVYQHSDTGWAKNTGSGWQNVDRTADTSRLDAEEHARSVSQQRVS EEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH SYGGDHYGGEGYGGGERFGGGFEGGERYGSGGFDRGFGGFGGGDRFGGGGFRGGFGGGFR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C >Mature Secondary Structure TRLWTGVSAAVLSAALLWSTSGQAQPAPASQGQDAAGQQAPLAWPRDFPLPGDQLLQLY CEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QPQIDSWTGDVMSGRAAVAIGPKSGTPTYGMVRFSARVAVDKPAGLVHLATISIEGVEVP CCCCCCCCCHHHCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCC TEPAKASLIRSTLQSRLPANGMTVPLDQLQASYAVNQELAKLKSQPVDNTPPQILFATTT CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE TVLVPVAGTPVLRPISGAPTFQRVANTRPLLLLDEAGTYHLEAGGHWYESPSLTGTWILT EEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEECCCCEECCCCCCEEEEEC PQISDALSAAAKAATQEQAADPLLDAKGKPINPAPAILVATQPAELIQSNGPPQMLPVAG CCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEECC TNLLSMNNADHAVFMETTSNTYYILLSGRWFRAPDLKGPWAFVASDALPKDFAKISPNDP CEEEEECCCCCEEEEEECCCEEEEEEECCEEECCCCCCCEEEEECCCCCHHHHHCCCCCC KANVLVSVAGTPQAKEAVIAATIPQTATVKRDVPLKVAFDGAPRFEPIPGTGLHYAINTP CCEEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEECCC TPVIQLDTERYYAVNNGIWFVAETATGPWRVADVVPDVIYTIPVSSPLHYVTYVRIYAST CCEEEECCCEEEEEECCEEEEEECCCCCEEHHHHCCCEEEEECCCCCCEEEEEEEEEECC PEAVVVGYTPGYMGVVVAPGGTVVYGTGYTCPGYVGTYWFSCPVTYGVGAGFALGVADGF CCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCEEECCCCCEEEEHHCCH AFGFAAGWPWGAAVTPYWGPYWHPYGPYPYGPYGPWGGHWGYTNINQTNLYGRWGGAATV HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE NHAWGTTWNGTEWSGRDWHGTTAGGTGFTGRSAAAFNPYTGNYAAGAENARYNPTTGARG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESRAGVEGNAYTGNAAAGRESAGFNPTTGTGHASQTAVTDHDGKVSVDSRGVAGNVKTGN CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCC AVAWNNGHVAVDHDGNVYQHSDTGWAKNTGSGWQNVDRTADTSRLDAEEHARSVSQQRVS EEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH SYGGDHYGGEGYGGGERFGGGFEGGERYGSGGFDRGFGGFGGGDRFGGGGFRGGFGGGFR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA