Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is opgH [H]
Identifier: 154246259
GI number: 154246259
Start: 2587049
End: 2588869
Strand: Direct
Name: opgH [H]
Synonym: Xaut_2317
Alternate gene names: 154246259
Gene position: 2587049-2588869 (Clockwise)
Preceding gene: 154246254
Following gene: 154246262
Centisome position: 48.73
GC content: 70.57
Gene sequence:
>1821_bases ATGTCTTCGAGGTCCGGTCCACCGCCTGAAGTGAGCCCCGCCGCTGATTTCACCCCGGCCCTGCTCCAGCCGATGGCGGC CCTCGCCCGGCGCCGGATGTTCATGCTGGTGGCCAACGCCCTGACGCTGCTGGTGGTGCTGGCGGGGGTCGCCGCGCTGG GCGCCCATGGCGGATTTACCATTGTGGATGGCCTCATCCTCCTGTGCGCCCTCGCCATAACGCCTTGGAACGCCATCGGG TTCTGGAACGCGATCACCGGGCTCGCGCTGCTGCACGCCCGTCGGCGCGGGGTGGAGGCGGCGGCGCCCTTCCTCGCCCC GGAGCCGCAGGGGCCGCTCACCGCGCGCACCGCCATTCTGCTCACCGTGCGCAATGAGGATCCGGCGCGGGCGCTGGCGC GCCTCAGGGCGGTGAAGGCCGACCTCGACGCCAGCGGCCACGGCGCCCTGTTCGATTTCCATGTGCTCAGCGACACCTCG CGCCCGGAGATCGCGGCGGCGGAAGAGGCGGCGGTGGCGGCGTGGCGGAGCGAGGAGGGAGCGTCCCGCATCTTTTATCG CCGCCGGGCGGAGAACACCGATTTCAAGGCTGGCAACATCCGCGATTTCTGCCTCTCCGCCGGCGCGCGCTACGACTTCA TGCTGCCGTTGGATGCCGACAGCCTCATGGGCGCGTCCACCATCCTGCGCATGGCGCGCCTGATGGCGGCCCATCCGCGC CTCGGCATCCTGCAGAGCCTGGTTGTGGGGCTCCCGGCAAAGAGCGCCTTTGCCCGCATGTTCCAGTTCGGCATGCGTCA CGGCATGCGCTGCTACACCCTCGGCGCCTCCTGGTGGGCGGGGGAGTGCGGTCCTTTCTGGGGCCACAACGCGCTGATCC GCATCGCCCCGTTCCGCGCCTTCTGCCATCTGCCGCACCTGCCCGGCGCTCCGCCTTTGGGCGGGCCGATCCTCTCCCAC GACCAGGTGGAAGCGGCCTTGATGCGCCGGGCCGGCTATGAGGTGCGTGTCCTGCCGGTGGAGAGCGAGAGCTATGAGGA GAACCCGCCGGCCGTCACCGACTTCGTGTCGCGCGACCTGCGCTGGTGCCTCGGCAACCTGCAATATCTGCGGCTGCTGG CGCAGCCCGGCTTTGCCGCTAGCCTCAAGCCCATGAGCAGGTTCCAACTGGTCTGGGCCATCCTCATGTTCGTGACCGTG CCGGCCCATCCGCTGTTGATCGCGCTTTTGCCGTTCGCGGCGGCGCAGGCGGCGGGGATGCCGGATTATCCCGCCGGCCT CGCCATGGGGCTTTATGGCGGCATGCTGCTGCTGGCGCTGGCGCCGAAGCTTGCCGGCGTCGCCGACGTGGCGCTGACGC CGGGCGGCGTCGCGCGCTATGGCGGGGCAGGGCGCTTTGCCGTGTCGGTGGTGGTGGAGCTGGTGTTTTCGTTCTTGCTC TCGGCCATCACCGCGCTGGCGGTGACCCTGGAGATCGGCCGGCTGATGCTGGGTCGCGCCCGCTCCGGCTGGATGGCGCA AGCCCGCGACGGCCATGGGGTGAGCTGGGGTGCAGCGGCGCGGGCCCTCTGGCCGCAGACGGTGTTCGGCGTTGCGGTGA CGGCGGGGCTCGCTGTGGTGTCACCCGGCCTGATCTTGTGGGCGGCGCCGGTGCTGGCGGGCTATGTGCTCGCCATTCCG TTCACGGTGGCCACCGCCGATCCCCGCTTTGCCCGTTTCGCGGTCAGGACCCGCCTGTGCGCCGTGCCGGAGGAATTCGC GCCCACCGACGTGCAGCGCATTCTTTCGGGCGAAAGCCGGCGCGCGCGGGTCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCTTTCGTATAGCGCTTGCGGATACTGCCGTGGCCTTGCCGGCGGCGGGTGCGGGATGCGTTTTCAGCCTTGAGCCGGG TCCGGCAGTTGGAGCTATGC
Downstream 100 bases:
>100_bases AGCGGTTGGCTTGGCCGGGCCGGCCGGCGGCATAAAGTCCCGATCGACCCAGTCAGGGTTGCGCCTTGCTGGTGCCCCCG AGGATAGCGGACCGAGGATA
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MSSRSGPPPEVSPAADFTPALLQPMAALARRRMFMLVANALTLLVVLAGVAALGAHGGFTIVDGLILLCALAITPWNAIG FWNAITGLALLHARRRGVEAAAPFLAPEPQGPLTARTAILLTVRNEDPARALARLRAVKADLDASGHGALFDFHVLSDTS RPEIAAAEEAAVAAWRSEEGASRIFYRRRAENTDFKAGNIRDFCLSAGARYDFMLPLDADSLMGASTILRMARLMAAHPR LGILQSLVVGLPAKSAFARMFQFGMRHGMRCYTLGASWWAGECGPFWGHNALIRIAPFRAFCHLPHLPGAPPLGGPILSH DQVEAALMRRAGYEVRVLPVESESYEENPPAVTDFVSRDLRWCLGNLQYLRLLAQPGFAASLKPMSRFQLVWAILMFVTV PAHPLLIALLPFAAAQAAGMPDYPAGLAMGLYGGMLLLALAPKLAGVADVALTPGGVARYGGAGRFAVSVVVELVFSFLL SAITALAVTLEIGRLMLGRARSGWMAQARDGHGVSWGAAARALWPQTVFGVAVTAGLAVVSPGLILWAAPVLAGYVLAIP FTVATADPRFARFAVRTRLCAVPEEFAPTDVQRILSGESRRARVAA
Sequences:
>Translated_606_residues MSSRSGPPPEVSPAADFTPALLQPMAALARRRMFMLVANALTLLVVLAGVAALGAHGGFTIVDGLILLCALAITPWNAIG FWNAITGLALLHARRRGVEAAAPFLAPEPQGPLTARTAILLTVRNEDPARALARLRAVKADLDASGHGALFDFHVLSDTS RPEIAAAEEAAVAAWRSEEGASRIFYRRRAENTDFKAGNIRDFCLSAGARYDFMLPLDADSLMGASTILRMARLMAAHPR LGILQSLVVGLPAKSAFARMFQFGMRHGMRCYTLGASWWAGECGPFWGHNALIRIAPFRAFCHLPHLPGAPPLGGPILSH DQVEAALMRRAGYEVRVLPVESESYEENPPAVTDFVSRDLRWCLGNLQYLRLLAQPGFAASLKPMSRFQLVWAILMFVTV PAHPLLIALLPFAAAQAAGMPDYPAGLAMGLYGGMLLLALAPKLAGVADVALTPGGVARYGGAGRFAVSVVVELVFSFLL SAITALAVTLEIGRLMLGRARSGWMAQARDGHGVSWGAAARALWPQTVFGVAVTAGLAVVSPGLILWAAPVLAGYVLAIP FTVATADPRFARFAVRTRLCAVPEEFAPTDVQRILSGESRRARVAA >Mature_605_residues SSRSGPPPEVSPAADFTPALLQPMAALARRRMFMLVANALTLLVVLAGVAALGAHGGFTIVDGLILLCALAITPWNAIGF WNAITGLALLHARRRGVEAAAPFLAPEPQGPLTARTAILLTVRNEDPARALARLRAVKADLDASGHGALFDFHVLSDTSR PEIAAAEEAAVAAWRSEEGASRIFYRRRAENTDFKAGNIRDFCLSAGARYDFMLPLDADSLMGASTILRMARLMAAHPRL GILQSLVVGLPAKSAFARMFQFGMRHGMRCYTLGASWWAGECGPFWGHNALIRIAPFRAFCHLPHLPGAPPLGGPILSHD QVEAALMRRAGYEVRVLPVESESYEENPPAVTDFVSRDLRWCLGNLQYLRLLAQPGFAASLKPMSRFQLVWAILMFVTVP AHPLLIALLPFAAAQAAGMPDYPAGLAMGLYGGMLLLALAPKLAGVADVALTPGGVARYGGAGRFAVSVVVELVFSFLLS AITALAVTLEIGRLMLGRARSGWMAQARDGHGVSWGAAARALWPQTVFGVAVTAGLAVVSPGLILWAAPVLAGYVLAIPF TVATADPRFARFAVRTRLCAVPEEFAPTDVQRILSGESRRARVAA
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=564, Percent_Identity=32.6241134751773, Blast_Score=268, Evalue=8e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 64568; Mature: 64437
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRSGPPPEVSPAADFTPALLQPMAALARRRMFMLVANALTLLVVLAGVAALGAHGGFT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IVDGLILLCALAITPWNAIGFWNAITGLALLHARRRGVEAAAPFLAPEPQGPLTARTAIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEE LTVRNEDPARALARLRAVKADLDASGHGALFDFHVLSDTSRPEIAAAEEAAVAAWRSEEG EEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCC ASRIFYRRRAENTDFKAGNIRDFCLSAGARYDFMLPLDADSLMGASTILRMARLMAAHPR HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC LGILQSLVVGLPAKSAFARMFQFGMRHGMRCYTLGASWWAGECGPFWGHNALIRIAPFRA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECHHH FCHLPHLPGAPPLGGPILSHDQVEAALMRRAGYEVRVLPVESESYEENPPAVTDFVSRDL HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH RWCLGNLQYLRLLAQPGFAASLKPMSRFQLVWAILMFVTVPAHPLLIALLPFAAAQAAGM HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC PDYPAGLAMGLYGGMLLLALAPKLAGVADVALTPGGVARYGGAGRFAVSVVVELVFSFLL CCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH SAITALAVTLEIGRLMLGRARSGWMAQARDGHGVSWGAAARALWPQTVFGVAVTAGLAVV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SPGLILWAAPVLAGYVLAIPFTVATADPRFARFAVRTRLCAVPEEFAPTDVQRILSGESR CCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCC RARVAA CCCCCC >Mature Secondary Structure SSRSGPPPEVSPAADFTPALLQPMAALARRRMFMLVANALTLLVVLAGVAALGAHGGFT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IVDGLILLCALAITPWNAIGFWNAITGLALLHARRRGVEAAAPFLAPEPQGPLTARTAIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEE LTVRNEDPARALARLRAVKADLDASGHGALFDFHVLSDTSRPEIAAAEEAAVAAWRSEEG EEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCC ASRIFYRRRAENTDFKAGNIRDFCLSAGARYDFMLPLDADSLMGASTILRMARLMAAHPR HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC LGILQSLVVGLPAKSAFARMFQFGMRHGMRCYTLGASWWAGECGPFWGHNALIRIAPFRA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECHHH FCHLPHLPGAPPLGGPILSHDQVEAALMRRAGYEVRVLPVESESYEENPPAVTDFVSRDL HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH RWCLGNLQYLRLLAQPGFAASLKPMSRFQLVWAILMFVTVPAHPLLIALLPFAAAQAAGM HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC PDYPAGLAMGLYGGMLLLALAPKLAGVADVALTPGGVARYGGAGRFAVSVVVELVFSFLL CCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH SAITALAVTLEIGRLMLGRARSGWMAQARDGHGVSWGAAARALWPQTVFGVAVTAGLAVV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SPGLILWAAPVLAGYVLAIPFTVATADPRFARFAVRTRLCAVPEEFAPTDVQRILSGESR CCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCC RARVAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]