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The map label for this gene is rutD [H]

Identifier: 154246236

GI number: 154246236

Start: 2558095

End: 2558886

Strand: Direct

Name: rutD [H]

Synonym: Xaut_2294

Alternate gene names: 154246236

Gene position: 2558095-2558886 (Clockwise)

Preceding gene: 154246228

Following gene: 154246237

Centisome position: 48.18

GC content: 66.29

Gene sequence:

>792_bases
ATGCCGACGACGCAGAACGACGGGCTCGAACTTGCCTATCAGGTGAGCGGGGAGGGGCCGCCGGTCCTGATCATTTCCGG
CCTGTCCGCCGAGCGCTCGTTCTGGGCTCTGGCGCGGCCGCTGCTCGCGGGCTTCACCCTCATCGAGTTCGACAACCGCG
ACATCGGCAAGAGCGCGCGGGCCAAGGGCCCGTATGACGCCGCCGACATGGCGCGCGATGCCCTCGCCGTGCTTGACGCG
GCGGGTGTCCCGAAAGCGCATGTCATCGGTCATTCCATGGGGGGAATGATCGCGCAGGAACTGGCCCTCATGGCGCCGCA
GCGCGTGGACCGGCTGGTGCTCTCCAACACCATTGCCCAGAACGATCTCTACACCACCGAGATCATGCGCCTGCTCAAGG
AGCTACGGCTCCAGCTCGACGACGAGCTGACATTCGGCGCGGCGCTCACCAGCTTCGTGCTGGGCATGGGCACGCTGAAG
AAGATCCCGCTTTTTGCTGCGGTGCAGCAATCCCTCGATGCCGGGCTCTACCAGGAGAAGGACGCCTTCCTGCGTCAGCT
CGACGTGTGCACCAAGGTGGACACCGTGGCGCGGCTCGGCCGCATCTCGGCGCCGACCCTGGCCATCTATTGCGACGATG
ACCGCATGTTCTCGCCCCACATGGTGCGGGAGCTCGCGAACGGCATCCACGGCGCGGCGCTGGATGAGATTCTCGACAGC
GGTCACTGCCCCATGGTGGAGGCCCCCGAGAACTTCGCCACCACCGTCCGCGCCTTCCTGAAGGGCAGCTGA

Upstream 100 bases:

>100_bases
GCCATATGGCGAAGAGATGACGTTTCCGGCGTCTGATCGTCTCGTCGCCGGGCCCCGGCGGATGTGGCATAGCACCAGTG
CCAGCGCATGAGGGATGCCA

Downstream 100 bases:

>100_bases
CTGGGGAGAATGCTGCCACTCGGTTGCGTCCGCGCCGGAACGCCCTAAGTAAGGCCCCGAGCGGAGCTTTTCATGCAGCA
TTCCCCGGATACCATTTACG

Product: alpha/beta hydrolase fold protein

Products: 3-oxoadipate

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPTTQNDGLELAYQVSGEGPPVLIISGLSAERSFWALARPLLAGFTLIEFDNRDIGKSARAKGPYDAADMARDALAVLDA
AGVPKAHVIGHSMGGMIAQELALMAPQRVDRLVLSNTIAQNDLYTTEIMRLLKELRLQLDDELTFGAALTSFVLGMGTLK
KIPLFAAVQQSLDAGLYQEKDAFLRQLDVCTKVDTVARLGRISAPTLAIYCDDDRMFSPHMVRELANGIHGAALDEILDS
GHCPMVEAPENFATTVRAFLKGS

Sequences:

>Translated_263_residues
MPTTQNDGLELAYQVSGEGPPVLIISGLSAERSFWALARPLLAGFTLIEFDNRDIGKSARAKGPYDAADMARDALAVLDA
AGVPKAHVIGHSMGGMIAQELALMAPQRVDRLVLSNTIAQNDLYTTEIMRLLKELRLQLDDELTFGAALTSFVLGMGTLK
KIPLFAAVQQSLDAGLYQEKDAFLRQLDVCTKVDTVARLGRISAPTLAIYCDDDRMFSPHMVRELANGIHGAALDEILDS
GHCPMVEAPENFATTVRAFLKGS
>Mature_262_residues
PTTQNDGLELAYQVSGEGPPVLIISGLSAERSFWALARPLLAGFTLIEFDNRDIGKSARAKGPYDAADMARDALAVLDAA
GVPKAHVIGHSMGGMIAQELALMAPQRVDRLVLSNTIAQNDLYTTEIMRLLKELRLQLDDELTFGAALTSFVLGMGTLKK
IPLFAAVQQSLDAGLYQEKDAFLRQLDVCTKVDTVARLGRISAPTLAIYCDDDRMFSPHMVRELANGIHGAALDEILDSG
HCPMVEAPENFATTVRAFLKGS

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.1.24

Molecular weight: Translated: 28431; Mature: 28300

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTQNDGLELAYQVSGEGPPVLIISGLSAERSFWALARPLLAGFTLIEFDNRDIGKSAR
CCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHC
AKGPYDAADMARDALAVLDAAGVPKAHVIGHSMGGMIAQELALMAPQRVDRLVLSNTIAQ
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
NDLYTTEIMRLLKELRLQLDDELTFGAALTSFVLGMGTLKKIPLFAAVQQSLDAGLYQEK
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DAFLRQLDVCTKVDTVARLGRISAPTLAIYCDDDRMFSPHMVRELANGIHGAALDEILDS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCC
GHCPMVEAPENFATTVRAFLKGS
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTTQNDGLELAYQVSGEGPPVLIISGLSAERSFWALARPLLAGFTLIEFDNRDIGKSAR
CCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHC
AKGPYDAADMARDALAVLDAAGVPKAHVIGHSMGGMIAQELALMAPQRVDRLVLSNTIAQ
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
NDLYTTEIMRLLKELRLQLDDELTFGAALTSFVLGMGTLKKIPLFAAVQQSLDAGLYQEK
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DAFLRQLDVCTKVDTVARLGRISAPTLAIYCDDDRMFSPHMVRELANGIHGAALDEILDS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCC
GHCPMVEAPENFATTVRAFLKGS
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-oxoadipate enol-lactone; H2O

Specific reaction: 3-oxoadipate enol-lactone + H2O = 3-oxoadipate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA