Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is hisA
Identifier: 154246232
GI number: 154246232
Start: 2555476
End: 2556213
Strand: Reverse
Name: hisA
Synonym: Xaut_2290
Alternate gene names: 154246232
Gene position: 2556213-2555476 (Counterclockwise)
Preceding gene: 154246233
Following gene: 154246231
Centisome position: 48.15
GC content: 69.38
Gene sequence:
>738_bases GTGGCATCCGTGATCCTTTTTCCGGCCATCGACCTCAAGGACGGCCTCGCCGTGCGCCTCGAACAGGGCGACATGGCGCG GGCCACCGTGTTCAACCGCGATCCCGCCGCCCAGGCCGCGGAGTTCGAGACCCTCGGCTTTCGCTACCTCCATCTCGTGG ACCTTGACGGCGCCTTCGCTGGCAAGCCGGTCAACGCGGCGGCGGTGGAGCGGATTTTGGAGACGGTCTCCATTCCCGTG CAGCTCGGCGGCGGCATCCGCGACCTGAAGACCGTCGAGGCCTGGCTGGAGAAGGGGGTGACCCGCGTCATCCTTGGCAC CGCCGCGGTGCGCGACCCGGACTTCGTGAAGCAGGCGGCGAAGGCCCATCCCGGCCGCATCGTGGTGGGCCTTGATGCCC GCGATGGCCGCGTCGCCGTGGAGGGCTGGGCCGAGACCTCGGACATTGCCGCCGTGGACATCGCCAAAAGGTTCGAGGAT GCCGGCGTCACCGCCATCATCTACACCGACATCGCCCGCGACGGCCTGCTCAAGGGGCTGAACCTCGACGCCACCGTGGC GCTGGCGGAAGCGGTCAACCTGCCGGTGATCGCCTCGGGCGGCCTTGCCTCGCTCGCCGATATCGAGGCGCTGCTCACGC CGCGCGCGAAAAAGCTGGAAGGCGCCATTACCGGCCGCGCCCTCTATGATGGCCGGCTCGATGCCCGCGAGGCGCTGGCG CTGGTGGCGGGACGATAG
Upstream 100 bases:
>100_bases CCATCACCGCCATGGTCGCGCGCGACAACGTGGCCGGCACCCAGTTCCATCCCGAGAAGAGCCAGAGGCTCGGCCTCGCG CTCCTCGCGAATTTCCTGAA
Downstream 100 bases:
>100_bases GTGTGCCATGCTGAAAGTCCGCGTCATCCCCTGCCTCGACGTGAAGGACGGCCGCGTGGTGAAGGGTGTCCAGTTCGTGG ACCTGCGCGACGCCGGCGAT
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MASVILFPAIDLKDGLAVRLEQGDMARATVFNRDPAAQAAEFETLGFRYLHLVDLDGAFAGKPVNAAAVERILETVSIPV QLGGGIRDLKTVEAWLEKGVTRVILGTAAVRDPDFVKQAAKAHPGRIVVGLDARDGRVAVEGWAETSDIAAVDIAKRFED AGVTAIIYTDIARDGLLKGLNLDATVALAEAVNLPVIASGGLASLADIEALLTPRAKKLEGAITGRALYDGRLDAREALA LVAGR
Sequences:
>Translated_245_residues MASVILFPAIDLKDGLAVRLEQGDMARATVFNRDPAAQAAEFETLGFRYLHLVDLDGAFAGKPVNAAAVERILETVSIPV QLGGGIRDLKTVEAWLEKGVTRVILGTAAVRDPDFVKQAAKAHPGRIVVGLDARDGRVAVEGWAETSDIAAVDIAKRFED AGVTAIIYTDIARDGLLKGLNLDATVALAEAVNLPVIASGGLASLADIEALLTPRAKKLEGAITGRALYDGRLDAREALA LVAGR >Mature_244_residues ASVILFPAIDLKDGLAVRLEQGDMARATVFNRDPAAQAAEFETLGFRYLHLVDLDGAFAGKPVNAAAVERILETVSIPVQ LGGGIRDLKTVEAWLEKGVTRVILGTAAVRDPDFVKQAAKAHPGRIVVGLDARDGRVAVEGWAETSDIAAVDIAKRFEDA GVTAIIYTDIARDGLLKGLNLDATVALAEAVNLPVIASGGLASLADIEALLTPRAKKLEGAITGRALYDGRLDAREALAL VAGR
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=248, Percent_Identity=35.8870967741936, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788336, Length=250, Percent_Identity=24, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_XANP2 (A7IHP0)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001417190.1 - ProteinModelPortal: A7IHP0 - SMR: A7IHP0 - STRING: A7IHP0 - GeneID: 5420798 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_2290 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: XAUT78245:XAUT_2290-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25743; Mature: 25612
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: ACT_SITE 11-11 ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVILFPAIDLKDGLAVRLEQGDMARATVFNRDPAAQAAEFETLGFRYLHLVDLDGAFA CCCEEEEECEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCCC GKPVNAAAVERILETVSIPVQLGGGIRDLKTVEAWLEKGVTRVILGTAAVRDPDFVKQAA CCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEEEHHCCCCHHHHHHHH KAHPGRIVVGLDARDGRVAVEGWAETSDIAAVDIAKRFEDAGVTAIIYTDIARDGLLKGL HCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECHHHHHHHCCC NLDATVALAEAVNLPVIASGGLASLADIEALLTPRAKKLEGAITGRALYDGRLDAREALA CCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHEECCEEECCCCCHHHHHH LVAGR HHCCC >Mature Secondary Structure ASVILFPAIDLKDGLAVRLEQGDMARATVFNRDPAAQAAEFETLGFRYLHLVDLDGAFA CCEEEEECEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCCC GKPVNAAAVERILETVSIPVQLGGGIRDLKTVEAWLEKGVTRVILGTAAVRDPDFVKQAA CCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEEEHHCCCCHHHHHHHH KAHPGRIVVGLDARDGRVAVEGWAETSDIAAVDIAKRFEDAGVTAIIYTDIARDGLLKGL HCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECHHHHHHHCCC NLDATVALAEAVNLPVIASGGLASLADIEALLTPRAKKLEGAITGRALYDGRLDAREALA CCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHEECCEEECCCCCHHHHHH LVAGR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA