Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is hxuB [H]

Identifier: 154246223

GI number: 154246223

Start: 2541737

End: 2543524

Strand: Reverse

Name: hxuB [H]

Synonym: Xaut_2281

Alternate gene names: 154246223

Gene position: 2543524-2541737 (Counterclockwise)

Preceding gene: 154246224

Following gene: 154246222

Centisome position: 47.91

GC content: 67.06

Gene sequence:

>1788_bases
ATGACCCGTTCCAGGATTTCCGCCGGCTCGTCCCGGCCAGGACACACGCGTGTTCCAGGCACCGCGAGCGCTTCAGGCCT
CGCCCTCGCGGCGGCGGTCGGGATGCTCGTCCCGGCATCGGCCCTCGCCCAGGGCCTGCCCTTCAACATCGGCGATGCGG
TGCGTGACGCGCAGCAGTCCCAGCAGGCCGCGCCCCAGCCGCAGCAGGCCGCGCCTTTGGTGCTGCCGAAGCTCGCCGAG
CCGCAGCTGGTGCTGCCGGACAAGTCCACCCTCCACGTGCGCCACATCGCCGTCACCGGCACCGAGGGGCTGGCCGTCAG
CGAGGAAAAGCTGCGCGCTGTTCTGGCGCCCTATGAAGGCAGAAAGCTTTCCCTCGCCGAGATCTACGCCGCCGCCGACA
AGGTCACCGCGCTCTATCGCGAGGCCGGATATTTGGTGGCCAAGGTCTATGTGCCCCAGCAGGACGCGCGGAAGGGCACG
CTCACCTTCAAGCTGGTGCCCGGCCGCTACGGCCAGGTGAACGTCAAGAACGAGAGCCGGGTGAAAGACTTCATGGTGAG
GGGCACCCTCGACACCCAGAAGGTGCTGCCGGGCGAACTCATCGAGCAGGCCCGGCTGGAACGGGCCATGCTGCTGATCT
CCGACCTTGCCGGCGCCGGCATGCCGCGGGCGGTGATCGGGGCAGGCGCGACCCAGGGCACTTCCGACTTCGTGTTCGAC
GTGCCCGAGCAGCGCCTCGTCGACGGCTTCCTCATGGGCGACAATTTCGGCACGCCCTACACCGGCATCTGGCGCGCCTC
CGGCGGCTTCAACATCAACTCCCCGCTGGGCATTGGCGACCGGCTCTCCGCCTTCGGCCTCGTCTCCAACTCCACCGACA
TGCTCAACGGCCGCGTGGCCTATTCCCTGCCGCTTGGGTACGACGGCCTGAGGGCGGAGGTGGCGGCCTTCCGCACCACC
TATGCGCTGGGCGACACCTATGCCGACCTCAACGCCACCGGCGTTGCCGACGGCGTCTCCGCCACCCTGCTTTACCCCTT
CCTGCGCTCGCGGGCGGTCTCGGTCTGGGGCAGCGCGGCCTACACCTACAAGAACCTCAATGACGAGACCCTGGGCGTGT
CCTACGCCCACCGCTACATCAACGAGGGCATTGTGGGCCTCAACGGCGACACCTCCGGCGTGCTGCCCTGGCTGAACATG
CCGGTGGTGACCTCCACGGCGGTGGCCATCACCTTCGGCAACGTGGATTTCCCCGACGCCGACCAGGCGCTCGCCAACCT
CATCGGCGCCGATACCCAGGGCGACTTCTCCAAGATCACCGCATCCTTCGTGATGACGGTGGCGCTGATGGAGAAGCTGT
CGCTGTCGGTGAACGTGCGCGGCCAGAAGTCGTTCTCGGGGAATCTCGATTCCTCCGAGCAATTCTCCCTCACCGGCATC
TTCGGGGTGCGCAGCTATTACGAAGGGCTGTCAGGGGACAGCGGCTGGCTGGTGACGCCGGAACTGAAATACGCCCTGCC
GGACATCTATGGCTGGCACCACGCGGTGAGCGCCTTTGCCGACGTGGGCGGGGTGGCGCTGGAGGACGGCGCTTACACCA
TCACCCAGCCTGACTATGTGCAGCTCGGCGACATCGGCCTCGGCTATTACGGCAACTACGAATACATGCCCGGCCGCAAC
CTGCTCCTGAAGGCGTATCTCGCCTGGAGCGTGGGCGGCAACGAGGCCCAGGCCGGCTACAGCCGTGGCAACACCGTAGG
CCTGGTCCAGGCCGGCATCACCTTCTGA

Upstream 100 bases:

>100_bases
CCGGCGCCCGCCGCCGATGGCCCACTTTCCGGGCCCCGCGTTTCACCCGCCCTCTTGATCCCGTTCGTTCATCCGCACCT
TGCTTTCCGAGAGCCTCGCC

Downstream 100 bases:

>100_bases
GGACAGCACCATGGCAAGCATGAGCTGGCTGAAGGAAGCCATCGACTACGGCGTCATCGGCCTGCTGCTGGTGCTGAGCA
TCCTGGTGGTGGCGGTGGTG

Product: polypeptide-transport-associated domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAE
PQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGT
LTFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD
VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTT
YALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNM
PVVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI
FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRN
LLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF

Sequences:

>Translated_595_residues
MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAE
PQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGT
LTFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD
VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTT
YALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNM
PVVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI
FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRN
LLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF
>Mature_594_residues
TRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAEP
QLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTL
TFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFDV
PEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTTY
ALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMP
VVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGIF
GVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRNL
LLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 63123; Mature: 62992

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
QQAAPQPQQAAPLVLPKLAEPQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEG
HHCCCCCCCCCCEECCCCCCCCEECCCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCC
RKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTLTFKLVPGRYGQVNVKNESR
CEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCHHH
VKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD
HHHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEE
VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVA
CCHHHHHCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCHHCCCEEE
YSLPLGYDGLRAEVAAFRTTYALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAA
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
YTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMPVVTSTAVAITFGNVDFPDA
EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECEEEEEEECCCCCCCH
DQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEE
FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYV
HHHHHHHHCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCCEE
QLGDIGLGYYGNYEYMPGRNLLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF
EECCEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
TRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
QQAAPQPQQAAPLVLPKLAEPQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEG
HHCCCCCCCCCCEECCCCCCCCEECCCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCC
RKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTLTFKLVPGRYGQVNVKNESR
CEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCHHH
VKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD
HHHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEE
VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVA
CCHHHHHCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCHHCCCEEE
YSLPLGYDGLRAEVAAFRTTYALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAA
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
YTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMPVVTSTAVAITFGNVDFPDA
EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECEEEEEEECCCCCCCH
DQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEE
FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYV
HHHHHHHHCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCCEE
QLGDIGLGYYGNYEYMPGRNLLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF
EECCEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]