Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is hxuB [H]
Identifier: 154246223
GI number: 154246223
Start: 2541737
End: 2543524
Strand: Reverse
Name: hxuB [H]
Synonym: Xaut_2281
Alternate gene names: 154246223
Gene position: 2543524-2541737 (Counterclockwise)
Preceding gene: 154246224
Following gene: 154246222
Centisome position: 47.91
GC content: 67.06
Gene sequence:
>1788_bases ATGACCCGTTCCAGGATTTCCGCCGGCTCGTCCCGGCCAGGACACACGCGTGTTCCAGGCACCGCGAGCGCTTCAGGCCT CGCCCTCGCGGCGGCGGTCGGGATGCTCGTCCCGGCATCGGCCCTCGCCCAGGGCCTGCCCTTCAACATCGGCGATGCGG TGCGTGACGCGCAGCAGTCCCAGCAGGCCGCGCCCCAGCCGCAGCAGGCCGCGCCTTTGGTGCTGCCGAAGCTCGCCGAG CCGCAGCTGGTGCTGCCGGACAAGTCCACCCTCCACGTGCGCCACATCGCCGTCACCGGCACCGAGGGGCTGGCCGTCAG CGAGGAAAAGCTGCGCGCTGTTCTGGCGCCCTATGAAGGCAGAAAGCTTTCCCTCGCCGAGATCTACGCCGCCGCCGACA AGGTCACCGCGCTCTATCGCGAGGCCGGATATTTGGTGGCCAAGGTCTATGTGCCCCAGCAGGACGCGCGGAAGGGCACG CTCACCTTCAAGCTGGTGCCCGGCCGCTACGGCCAGGTGAACGTCAAGAACGAGAGCCGGGTGAAAGACTTCATGGTGAG GGGCACCCTCGACACCCAGAAGGTGCTGCCGGGCGAACTCATCGAGCAGGCCCGGCTGGAACGGGCCATGCTGCTGATCT CCGACCTTGCCGGCGCCGGCATGCCGCGGGCGGTGATCGGGGCAGGCGCGACCCAGGGCACTTCCGACTTCGTGTTCGAC GTGCCCGAGCAGCGCCTCGTCGACGGCTTCCTCATGGGCGACAATTTCGGCACGCCCTACACCGGCATCTGGCGCGCCTC CGGCGGCTTCAACATCAACTCCCCGCTGGGCATTGGCGACCGGCTCTCCGCCTTCGGCCTCGTCTCCAACTCCACCGACA TGCTCAACGGCCGCGTGGCCTATTCCCTGCCGCTTGGGTACGACGGCCTGAGGGCGGAGGTGGCGGCCTTCCGCACCACC TATGCGCTGGGCGACACCTATGCCGACCTCAACGCCACCGGCGTTGCCGACGGCGTCTCCGCCACCCTGCTTTACCCCTT CCTGCGCTCGCGGGCGGTCTCGGTCTGGGGCAGCGCGGCCTACACCTACAAGAACCTCAATGACGAGACCCTGGGCGTGT CCTACGCCCACCGCTACATCAACGAGGGCATTGTGGGCCTCAACGGCGACACCTCCGGCGTGCTGCCCTGGCTGAACATG CCGGTGGTGACCTCCACGGCGGTGGCCATCACCTTCGGCAACGTGGATTTCCCCGACGCCGACCAGGCGCTCGCCAACCT CATCGGCGCCGATACCCAGGGCGACTTCTCCAAGATCACCGCATCCTTCGTGATGACGGTGGCGCTGATGGAGAAGCTGT CGCTGTCGGTGAACGTGCGCGGCCAGAAGTCGTTCTCGGGGAATCTCGATTCCTCCGAGCAATTCTCCCTCACCGGCATC TTCGGGGTGCGCAGCTATTACGAAGGGCTGTCAGGGGACAGCGGCTGGCTGGTGACGCCGGAACTGAAATACGCCCTGCC GGACATCTATGGCTGGCACCACGCGGTGAGCGCCTTTGCCGACGTGGGCGGGGTGGCGCTGGAGGACGGCGCTTACACCA TCACCCAGCCTGACTATGTGCAGCTCGGCGACATCGGCCTCGGCTATTACGGCAACTACGAATACATGCCCGGCCGCAAC CTGCTCCTGAAGGCGTATCTCGCCTGGAGCGTGGGCGGCAACGAGGCCCAGGCCGGCTACAGCCGTGGCAACACCGTAGG CCTGGTCCAGGCCGGCATCACCTTCTGA
Upstream 100 bases:
>100_bases CCGGCGCCCGCCGCCGATGGCCCACTTTCCGGGCCCCGCGTTTCACCCGCCCTCTTGATCCCGTTCGTTCATCCGCACCT TGCTTTCCGAGAGCCTCGCC
Downstream 100 bases:
>100_bases GGACAGCACCATGGCAAGCATGAGCTGGCTGAAGGAAGCCATCGACTACGGCGTCATCGGCCTGCTGCTGGTGCTGAGCA TCCTGGTGGTGGCGGTGGTG
Product: polypeptide-transport-associated domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAE PQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGT LTFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTT YALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNM PVVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRN LLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF
Sequences:
>Translated_595_residues MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAE PQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGT LTFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTT YALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNM PVVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRN LLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF >Mature_594_residues TRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQSQQAAPQPQQAAPLVLPKLAEP QLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEGRKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTL TFKLVPGRYGQVNVKNESRVKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFDV PEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVAYSLPLGYDGLRAEVAAFRTTY ALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAAYTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMP VVTSTAVAITFGNVDFPDADQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGIF GVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYVQLGDIGLGYYGNYEYMPGRNL LLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF
Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]
COG id: COG2831
COG function: function code U; Hemolysin activation/secretion protein
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tpsB (TC 1.B.20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013686 [H]
Pfam domain/function: PF08479 POTRA_2 [H]
EC number: NA
Molecular weight: Translated: 63123; Mature: 62992
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH QQAAPQPQQAAPLVLPKLAEPQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEG HHCCCCCCCCCCEECCCCCCCCEECCCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCC RKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTLTFKLVPGRYGQVNVKNESR CEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCHHH VKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD HHHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEE VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVA CCHHHHHCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCHHCCCEEE YSLPLGYDGLRAEVAAFRTTYALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAA EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE YTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMPVVTSTAVAITFGNVDFPDA EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECEEEEEEECCCCCCCH DQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEE FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYV HHHHHHHHCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCCEE QLGDIGLGYYGNYEYMPGRNLLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF EECCEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TRSRISAGSSRPGHTRVPGTASASGLALAAAVGMLVPASALAQGLPFNIGDAVRDAQQS CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH QQAAPQPQQAAPLVLPKLAEPQLVLPDKSTLHVRHIAVTGTEGLAVSEEKLRAVLAPYEG HHCCCCCCCCCCEECCCCCCCCEECCCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCC RKLSLAEIYAAADKVTALYREAGYLVAKVYVPQQDARKGTLTFKLVPGRYGQVNVKNESR CEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCHHH VKDFMVRGTLDTQKVLPGELIEQARLERAMLLISDLAGAGMPRAVIGAGATQGTSDFVFD HHHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEE VPEQRLVDGFLMGDNFGTPYTGIWRASGGFNINSPLGIGDRLSAFGLVSNSTDMLNGRVA CCHHHHHCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCHHCCCEEE YSLPLGYDGLRAEVAAFRTTYALGDTYADLNATGVADGVSATLLYPFLRSRAVSVWGSAA EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE YTYKNLNDETLGVSYAHRYINEGIVGLNGDTSGVLPWLNMPVVTSTAVAITFGNVDFPDA EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECEEEEEEECCCCCCCH DQALANLIGADTQGDFSKITASFVMTVALMEKLSLSVNVRGQKSFSGNLDSSEQFSLTGI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEE FGVRSYYEGLSGDSGWLVTPELKYALPDIYGWHHAVSAFADVGGVALEDGAYTITQPDYV HHHHHHHHCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCCEE QLGDIGLGYYGNYEYMPGRNLLLKAYLAWSVGGNEAQAGYSRGNTVGLVQAGITF EECCEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]