Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is insC1 [C]
Identifier: 154246194
GI number: 154246194
Start: 2513667
End: 2514062
Strand: Direct
Name: insC1 [C]
Synonym: Xaut_2252
Alternate gene names: 154246194
Gene position: 2513667-2514062 (Clockwise)
Preceding gene: 154246193
Following gene: 154246195
Centisome position: 47.35
GC content: 69.95
Gene sequence:
>396_bases ATGACGCTGTCGCGGGTGGAGGTGATCACCTCGGTGGAGCGGCGCCGGCGTTGGCCGCGGGCCGAGAAGGAGCGGCTGGT GGCGCTGGCACTGGAGCCCGGGGCCTCAGCTTCCGAGATCGCCCGCTCGGCGGGCGTGCATGTGAGCCAACTCTTCCGCT GGCGCAAGCAGCTCTGCGAGCGGGTCACGCCCCAGTTGCCAGCCTTCCTGCCGATGATTGTCGAGCCGCCTGCGGATCCC GTGTCACCTCCCGACGAGCCATTGCCGCGTAAGCGCAAGGCTCGTCGCGAGAGCCGCATCGAGATTGAACTGGCTTCTGG CGACCGGCTGCGGCTGGAGGGCGACGTGGATGGCCGAACGCTGCGCGCGGCGATCGCCGCCCTGAGAGCGCGATGA
Upstream 100 bases:
>100_bases GCTCAACGATTGAACCTTGAGTTGTACCCATCCGGCGAGGGCCGCCTTGCGGAGGTGAGGCGATGACGTGAGTCCTAGGA GTAATCCTAGGAGTAGTCAT
Downstream 100 bases:
>100_bases TCCCCGTCCCGGTCGGCGCGAAGGTATGGCTAGCGACGGGCCACACGGACATGCGCAAGGGCTTCGCCTCCCTGGCGCTG CAAGTCCAGGAGGTCCTCAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTLSRVEVITSVERRRRWPRAEKERLVALALEPGASASEIARSAGVHVSQLFRWRKQLCERVTPQLPAFLPMIVEPPADP VSPPDEPLPRKRKARRESRIEIELASGDRLRLEGDVDGRTLRAAIAALRAR
Sequences:
>Translated_131_residues MTLSRVEVITSVERRRRWPRAEKERLVALALEPGASASEIARSAGVHVSQLFRWRKQLCERVTPQLPAFLPMIVEPPADP VSPPDEPLPRKRKARRESRIEIELASGDRLRLEGDVDGRTLRAAIAALRAR >Mature_130_residues TLSRVEVITSVERRRRWPRAEKERLVALALEPGASASEIARSAGVHVSQLFRWRKQLCERVTPQLPAFLPMIVEPPADPV SPPDEPLPRKRKARRESRIEIELASGDRLRLEGDVDGRTLRAAIAALRAR
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14805; Mature: 14674
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRVEVITSVERRRRWPRAEKERLVALALEPGASASEIARSAGVHVSQLFRWRKQLCE CCCHHHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHH RVTPQLPAFLPMIVEPPADPVSPPDEPLPRKRKARRESRIEIELASGDRLRLEGDVDGRT HCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCHH LRAAIAALRAR HHHHHHHHHCC >Mature Secondary Structure TLSRVEVITSVERRRRWPRAEKERLVALALEPGASASEIARSAGVHVSQLFRWRKQLCE CCHHHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHH RVTPQLPAFLPMIVEPPADPVSPPDEPLPRKRKARRESRIEIELASGDRLRLEGDVDGRT HCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCHH LRAAIAALRAR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA